RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 A0A087WZ39 114 aa9.08□□□□□ -0.96
SLC28A1-203ENST00000394573 MIR7-3HGQ8N6C7 128 aa9.08□□□□□ -0.96
SLC28A1-203ENST00000394573 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.07□□□□□ -0.96
SLC28A1-203ENST00000394573 TRAV10A0A0B4J240 114 aa9.07□□□□□ -0.96
SLC28A1-203ENST00000394573 IGKV2-29A2NJV5 120 aaPredicted RBP9.07□□□□□ -0.96
SLC28A1-203ENST00000394573 MOB4Q9Y3A3 225 aa9.07□□□□□ -0.96
SLC28A1-203ENST00000394573 COL27A1Q8IZC6 1860 aaPredicted RBP9.07□□□□□ -0.96
SLC28A1-203ENST00000394573 UNQ9165/PRO28630Q6UXU0 137 aa9.07□□□□□ -0.96
SLC28A1-203ENST00000394573 LYNX1G3V0Z9 82 aa9.07□□□□□ -0.96
SLC28A1-203ENST00000394573 LYNX1P0DP58 116 aa9.07□□□□□ -0.96
SLC28A1-203ENST00000394573 C6orf226Q5I0X4 101 aa9.07□□□□□ -0.96
SLC28A1-203ENST00000394573 ITLN2Q8WWU7 325 aaPredicted RBP9.07□□□□□ -0.96
SLC28A1-203ENST00000394573 Q9UF83 564 aa9.07□□□□□ -0.96
SLC28A1-203ENST00000394573 HIST2H2BCQ6DN03 193 aa9.06□□□□□ -0.96
SLC28A1-203ENST00000394573 HIST2H2BDQ6DRA6 164 aa9.06□□□□□ -0.96
SLC28A1-203ENST00000394573 TRBV6-5A0A0K0K1A5 114 aa9.06□□□□□ -0.96
SLC28A1-203ENST00000394573 NDUFA1O15239 70 aa9.06□□□□□ -0.96
SLC28A1-203ENST00000394573 C2CD3Q4AC94 2353 aa9.05□□□□□ -0.96
SLC28A1-203ENST00000394573 PROK1P58294 105 aa9.05□□□□□ -0.96
SLC28A1-203ENST00000394573 RNASE1P07998 156 aaKnown RBP9.05□□□□□ -0.96
SLC28A1-203ENST00000394573 COX6A2Q02221 97 aa9.05□□□□□ -0.96
SLC28A1-203ENST00000394573 C11orf72Q8NBR9 251 aa9.05□□□□□ -0.96
SLC28A1-203ENST00000394573 U3KQE9 123 aa9.05□□□□□ -0.96
SLC28A1-203ENST00000394573 PATE3B3GLJ2 98 aa9.04□□□□□ -0.96
SLC28A1-203ENST00000394573 IGKV3-20P01619 116 aa9.04□□□□□ -0.96
SLC28A1-203ENST00000394573 LINC00337Q8N6G1 96 aa9.04□□□□□ -0.96
SLC28A1-203ENST00000394573 COL6A6A6NMZ7 2263 aa9.04□□□□□ -0.96
SLC28A1-203ENST00000394573 TRAV7A0A075B6U4 112 aa9.03□□□□□ -0.96
SLC28A1-203ENST00000394573 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.03□□□□□ -0.96
SLC28A1-203ENST00000394573 Q6ZTI0 123 aa9.03□□□□□ -0.96
SLC28A1-203ENST00000394573 MRPL53Q96EL3 112 aaKnown RBP9.03□□□□□ -0.96
SLC28A1-203ENST00000394573 CRPP02741 224 aa9.03□□□□□ -0.96
SLC28A1-203ENST00000394573 SAA4P35542 130 aa9.03□□□□□ -0.96
SLC28A1-203ENST00000394573 KLKP1Q107X0 134 aa9.03□□□□□ -0.96
SLC28A1-203ENST00000394573 SMIM11BQ8TCY0 68 aa9.03□□□□□ -0.96
SLC28A1-203ENST00000394573 CCDC140Q96MF4 163 aa9.03□□□□□ -0.96
SLC28A1-203ENST00000394573 IGHV3-38A0A0C4DH36 116 aa9.02□□□□□ -0.96
SLC28A1-203ENST00000394573 LRCOL1A6NCL2 159 aa9.02□□□□□ -0.96
SLC28A1-203ENST00000394573 MED14OSP0DP75 135 aa9.02□□□□□ -0.96
SLC28A1-203ENST00000394573 BLCAPP62952 87 aa9.02□□□□□ -0.96
SLC28A1-203ENST00000394573 RPL36AP83881 106 aaKnown RBP9.02□□□□□ -0.96
SLC28A1-203ENST00000394573 RPL36ALQ969Q0 106 aaKnown RBP9.02□□□□□ -0.96
SLC28A1-203ENST00000394573 IGHV1OR15-1A0A075B7D0 117 aa9.02□□□□□ -0.97
SLC28A1-203ENST00000394573 PAX4O43316 350 aa9.01□□□□□ -0.97
SLC28A1-203ENST00000394573 OBSCN-AS1Q96MR7 158 aa9.01□□□□□ -0.97
SLC28A1-203ENST00000394573 G3V318 75 aa9.01□□□□□ -0.97
SLC28A1-203ENST00000394573 LENEPQ9Y5L5 61 aa9.01□□□□□ -0.97
SLC28A1-203ENST00000394573 ZDBF2Q9HCK1 2354 aa9□□□□□ -0.97
SLC28A1-203ENST00000394573 TMEM89A2RUT3 159 aa9□□□□□ -0.97
SLC28A1-203ENST00000394573 HTN1P15515 57 aa9□□□□□ -0.97
SLC28A1-203ENST00000394573 RNF5Q99942 180 aa9□□□□□ -0.97
SLC28A1-203ENST00000394573 TM2D3Q9BRN9 247 aa8.99□□□□□ -0.97
SLC28A1-203ENST00000394573 CELSR1Q9NYQ6 3014 aa8.99□□□□□ -0.97
SLC28A1-203ENST00000394573 SEM1Q6ZVN7 128 aa8.99□□□□□ -0.97
SLC28A1-203ENST00000394573 PIEZO2Q9H5I5 2752 aa8.98□□□□□ -0.97
SLC28A1-203ENST00000394573 IGKV2-28A0A075B6P5 120 aa8.98□□□□□ -0.97
SLC28A1-203ENST00000394573 IGHV7-81A0A0B4J1V7 117 aa8.98□□□□□ -0.97
SLC28A1-203ENST00000394573 IGKV2D-28P01615 120 aa8.98□□□□□ -0.97
SLC28A1-203ENST00000394573 HAMPP81172 84 aa8.98□□□□□ -0.97
SLC28A1-203ENST00000394573 NPBQ8NG41 125 aa8.98□□□□□ -0.97
SLC28A1-203ENST00000394573 FAM110DQ8TAY7 271 aaPredicted RBP8.98□□□□□ -0.97
SLC28A1-203ENST00000394573 COPS9Q8WXC6 57 aa8.98□□□□□ -0.97
SLC28A1-203ENST00000394573 LINC00467Q9BRT7 94 aa8.98□□□□□ -0.97
SLC28A1-203ENST00000394573 DPM3Q9P2X0 92 aa8.98□□□□□ -0.97
SLC28A1-203ENST00000394573 NCOR1O75376 2440 aa8.97□□□□□ -0.97
SLC28A1-203ENST00000394573 UBL5Q9BZL1 73 aa8.97□□□□□ -0.97
SLC28A1-203ENST00000394573 ORMDL1Q9P0S3 153 aa8.97□□□□□ -0.97
SLC28A1-203ENST00000394573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.97□□□□□ -0.97
SLC28A1-203ENST00000394573 GPR179Q6PRD1 2367 aa8.96□□□□□ -0.97
SLC28A1-203ENST00000394573 TRAV13-2A0A0B4J235 113 aa8.96□□□□□ -0.98
SLC28A1-203ENST00000394573 ATP6V0E1O15342 81 aa8.95□□□□□ -0.98
SLC28A1-203ENST00000394573 SCXQ7RTU7 201 aa8.95□□□□□ -0.98
SLC28A1-203ENST00000394573 SND1-IT1Q9HBX3 110 aa8.95□□□□□ -0.98
SLC28A1-203ENST00000394573 IGHV3-16A0A0C4DH30 117 aa8.95□□□□□ -0.98
SLC28A1-203ENST00000394573 CREBBPQ92793 2442 aa8.95□□□□□ -0.98
SLC28A1-203ENST00000394573 MIFP14174 115 aa8.95□□□□□ -0.98
SLC28A1-203ENST00000394573 ATP5EP2Q5VTU8 51 aa8.95□□□□□ -0.98
SLC28A1-203ENST00000394573 DGAT2L7PQ6IED9 249 aa8.94□□□□□ -0.98
SLC28A1-203ENST00000394573 M0R2N4 97 aa8.94□□□□□ -0.98
SLC28A1-203ENST00000394573 PRM2P04554 102 aa8.94□□□□□ -0.98
SLC28A1-203ENST00000394573 CHCHD7Q9BUK0 85 aa8.94□□□□□ -0.98
SLC28A1-203ENST00000394573 GVINP1Q7Z2Y8 2422 aa8.93□□□□□ -0.98
SLC28A1-203ENST00000394573 DAD1P61803 113 aa8.93□□□□□ -0.98
SLC28A1-203ENST00000394573 A0A1W2PNU3 283 aaPredicted RBP8.93□□□□□ -0.98
SLC28A1-203ENST00000394573 SMIM1B2RUZ4 78 aa8.93□□□□□ -0.98
SLC28A1-203ENST00000394573 CFHR3Q02985 330 aa8.93□□□□□ -0.98
SLC28A1-203ENST00000394573 PLAC8L1A1L4L8 177 aa8.92□□□□□ -0.98
SLC28A1-203ENST00000394573 C6orf223Q8N319 242 aa8.92□□□□□ -0.98
SLC28A1-203ENST00000394573 KAAG1Q9UBP8 84 aa8.92□□□□□ -0.98
SLC28A1-203ENST00000394573 IGHV3OR16-12A0A075B7B8 117 aa8.92□□□□□ -0.98
SLC28A1-203ENST00000394573 A8MU10 97 aa8.92□□□□□ -0.98
SLC28A1-203ENST00000394573 CD164Q04900 197 aa8.92□□□□□ -0.98
SLC28A1-203ENST00000394573 BSPH1Q075Z2 132 aa8.92□□□□□ -0.98
SLC28A1-203ENST00000394573 PRR15Q8IV56 129 aa8.92□□□□□ -0.98
SLC28A1-203ENST00000394573 OVOL2Q9BRP0 275 aa8.92□□□□□ -0.98
SLC28A1-203ENST00000394573 PSPHP1O15172 72 aa8.91□□□□□ -0.98
SLC28A1-203ENST00000394573 LINC00242Q5T6M2 205 aa8.91□□□□□ -0.98
SLC28A1-203ENST00000394573 C11orf68Q9H3H3 251 aaKnown RBP8.91□□□□□ -0.98
SLC28A1-203ENST00000394573 TOMM7Q9P0U1 55 aa8.91□□□□□ -0.98
SLC28A1-203ENST00000394573 IGLV5-39A0A0G2JS06 123 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms