RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 SMIM1B2RUZ4 78 aa16.42■□□□□ 0.22
RARA-202ENST00000394081 COX6A2Q02221 97 aa16.42■□□□□ 0.22
RARA-202ENST00000394081 NRGNQ92686 78 aa16.42■□□□□ 0.22
RARA-202ENST00000394081 OVOL2Q9BRP0 275 aa16.42■□□□□ 0.22
RARA-202ENST00000394081 COX7CP15954 63 aa16.41■□□□□ 0.22
RARA-202ENST00000394081 HIST1H4AP62805 103 aaKnown RBP16.41■□□□□ 0.22
RARA-202ENST00000394081 A0A1B0GX51 115 aa16.4■□□□□ 0.22
RARA-202ENST00000394081 UCNP55089 124 aa16.4■□□□□ 0.22
RARA-202ENST00000394081 SYNJ2BPP57105 145 aa16.4■□□□□ 0.22
RARA-202ENST00000394081 HTN1P15515 57 aa16.4■□□□□ 0.22
RARA-202ENST00000394081 RS1O15537 224 aa16.39■□□□□ 0.21
RARA-202ENST00000394081 HIST2H2BCQ6DN03 193 aa16.39■□□□□ 0.21
RARA-202ENST00000394081 HIST2H2BDQ6DRA6 164 aa16.39■□□□□ 0.21
RARA-202ENST00000394081 C3orf56Q8N813 242 aa16.39■□□□□ 0.21
RARA-202ENST00000394081 COL6A6A6NMZ7 2263 aa16.39■□□□□ 0.21
RARA-202ENST00000394081 LRRC75A-AS1Q8N1F1 130 aa16.39■□□□□ 0.21
RARA-202ENST00000394081 TRAV13-2A0A0B4J235 113 aa16.38■□□□□ 0.21
RARA-202ENST00000394081 ATOX1O00244 68 aa16.38■□□□□ 0.21
RARA-202ENST00000394081 RPL28P46779 137 aaKnown RBP16.38■□□□□ 0.21
RARA-202ENST00000394081 PRIMA1Q86XR5 153 aa16.38■□□□□ 0.21
RARA-202ENST00000394081 LINC00694P0DN24 101 aa16.38■□□□□ 0.21
RARA-202ENST00000394081 CRYGAP11844 174 aa16.38■□□□□ 0.21
RARA-202ENST00000394081 C10orf105Q8TEF2 133 aa16.38■□□□□ 0.21
RARA-202ENST00000394081 SVEP1Q4LDE5 3571 aa16.37■□□□□ 0.21
RARA-202ENST00000394081 SPTA1P02549 2419 aa16.37■□□□□ 0.21
RARA-202ENST00000394081 IGHV3-38A0A0C4DH36 116 aa16.36■□□□□ 0.21
RARA-202ENST00000394081 C11orf72Q8NBR9 251 aa16.36■□□□□ 0.21
RARA-202ENST00000394081 ASH1LQ9NR48 2969 aaKnown RBP16.36■□□□□ 0.21
RARA-202ENST00000394081 ZFYVE26Q68DK2 2539 aa16.36■□□□□ 0.21
RARA-202ENST00000394081 MALP21145 153 aa16.36■□□□□ 0.21
RARA-202ENST00000394081 FAM218AQ96MZ4 157 aa16.35■□□□□ 0.21
RARA-202ENST00000394081 C2orf48Q96LS8 159 aa16.35■□□□□ 0.21
RARA-202ENST00000394081 MSMBP08118 114 aa16.34■□□□□ 0.21
RARA-202ENST00000394081 DEFB131AP59861 70 aa16.34■□□□□ 0.21
RARA-202ENST00000394081 RBMY1BA6NDE4 496 aaKnown RBP16.33■□□□□ 0.2
RARA-202ENST00000394081 RBMY1EA6NEQ0 496 aaKnown RBP16.33■□□□□ 0.2
RARA-202ENST00000394081 J3KT08 172 aa16.33■□□□□ 0.2
RARA-202ENST00000394081 RBMY1DP0C7P1 496 aaKnown RBP16.33■□□□□ 0.2
RARA-202ENST00000394081 HOXD3P31249 432 aaPredicted RBP16.33■□□□□ 0.2
RARA-202ENST00000394081 GAGE2AQ6NT46 116 aa16.33■□□□□ 0.2
RARA-202ENST00000394081 F5H768 121 aa16.33■□□□□ 0.2
RARA-202ENST00000394081 PKD1L2Q7Z442 2459 aa16.32■□□□□ 0.2
RARA-202ENST00000394081 RPS28P62857 69 aaKnown RBP16.32■□□□□ 0.2
RARA-202ENST00000394081 A0A0U1RRA0 63 aa16.31■□□□□ 0.2
RARA-202ENST00000394081 C10orf99Q6UWK7 81 aa16.31■□□□□ 0.2
RARA-202ENST00000394081 UBE2E2Q96LR5 201 aa16.31■□□□□ 0.2
RARA-202ENST00000394081 CRPP02741 224 aa16.3■□□□□ 0.2
RARA-202ENST00000394081 SPTAN1Q13813 2472 aaKnown RBP16.29■□□□□ 0.2
RARA-202ENST00000394081 TRBV10-1A0A0K0K1A3 114 aa16.28■□□□□ 0.2
RARA-202ENST00000394081 OBSCN-AS1Q96MR7 158 aa16.28■□□□□ 0.2
RARA-202ENST00000394081 ITPR1Q14643 2758 aa16.28■□□□□ 0.2
RARA-202ENST00000394081 DNAL4O96015 105 aa16.28■□□□□ 0.2
RARA-202ENST00000394081 INSP01308 110 aa16.27■□□□□ 0.2
RARA-202ENST00000394081 Q6JHZ5 121 aa16.27■□□□□ 0.2
RARA-202ENST00000394081 H0YGX0 51 aa16.26■□□□□ 0.19
RARA-202ENST00000394081 PRM2P04554 102 aa16.26■□□□□ 0.19
RARA-202ENST00000394081 RPL18AQ02543 176 aaKnown RBP16.26■□□□□ 0.19
RARA-202ENST00000394081 CDC42SE2Q9NRR3 84 aa16.26■□□□□ 0.19
RARA-202ENST00000394081 TRAV13-1A0A0B4J241 112 aa16.25■□□□□ 0.19
RARA-202ENST00000394081 IGHV4-59P01825 116 aa16.25■□□□□ 0.19
RARA-202ENST00000394081 RELNP78509 3460 aa16.25■□□□□ 0.19
RARA-202ENST00000394081 FAM208BQ5VWN6 2430 aa16.25■□□□□ 0.19
RARA-202ENST00000394081 RPL36AP83881 106 aaKnown RBP16.25■□□□□ 0.19
RARA-202ENST00000394081 RPL36ALQ969Q0 106 aaKnown RBP16.25■□□□□ 0.19
RARA-202ENST00000394081 ZFHX3Q15911 3703 aa16.25■□□□□ 0.19
RARA-202ENST00000394081 B4DSR2 109 aa16.24■□□□□ 0.19
RARA-202ENST00000394081 Q9HAA7 133 aa16.24■□□□□ 0.19
RARA-202ENST00000394081 NBASA2RRP1 2371 aa16.23■□□□□ 0.19
RARA-202ENST00000394081 AVPP01185 164 aa16.23■□□□□ 0.19
RARA-202ENST00000394081 C19orf84I3L1E1 186 aa16.22■□□□□ 0.19
RARA-202ENST00000394081 CCL19Q99731 98 aa16.22■□□□□ 0.19
RARA-202ENST00000394081 IGHV4-30-2A0A087WSY4 118 aa16.22■□□□□ 0.19
RARA-202ENST00000394081 LINC00337Q8N6G1 96 aa16.22■□□□□ 0.19
RARA-202ENST00000394081 DEFB112Q30KQ8 113 aa16.21■□□□□ 0.19
RARA-202ENST00000394081 KLK5Q9Y337 293 aaPredicted RBP16.21■□□□□ 0.19
RARA-202ENST00000394081 SORL1Q92673 2214 aa16.21■□□□□ 0.19
RARA-202ENST00000394081 IL17DQ8TAD2 202 aa16.21■□□□□ 0.19
RARA-202ENST00000394081 SND1-IT1Q9HBX3 110 aa16.2■□□□□ 0.18
RARA-202ENST00000394081 IGKV2-28A0A075B6P5 120 aa16.2■□□□□ 0.18
RARA-202ENST00000394081 K7EQD1 137 aa16.2■□□□□ 0.18
RARA-202ENST00000394081 IGKV2D-28P01615 120 aa16.2■□□□□ 0.18
RARA-202ENST00000394081 C5orf47Q569G3 176 aa16.2■□□□□ 0.18
RARA-202ENST00000394081 NTM-AS1Q6ZSK4 140 aa16.2■□□□□ 0.18
RARA-202ENST00000394081 MAP6D1Q9H9H5 199 aa16.2■□□□□ 0.18
RARA-202ENST00000394081 TMEM258P61165 79 aa16.19■□□□□ 0.18
RARA-202ENST00000394081 SERP2Q8N6R1 65 aa16.19■□□□□ 0.18
RARA-202ENST00000394081 MIR7-3HGQ8N6C7 128 aa16.18■□□□□ 0.18
RARA-202ENST00000394081 COX7B2Q8TF08 81 aa16.18■□□□□ 0.18
RARA-202ENST00000394081 Q96MF0 132 aa16.18■□□□□ 0.18
RARA-202ENST00000394081 LOC107984640A0A0U1RRK4 108 aa16.17■□□□□ 0.18
RARA-202ENST00000394081 SMIM11BQ8TCY0 68 aa16.17■□□□□ 0.18
RARA-202ENST00000394081 HIVEP3Q5T1R4 2406 aa16.17■□□□□ 0.18
RARA-202ENST00000394081 ATP5J2P56134 94 aa16.17■□□□□ 0.18
RARA-202ENST00000394081 AKAP6Q13023 2319 aa16.16■□□□□ 0.18
RARA-202ENST00000394081 A0A087WYN8 130 aa16.16■□□□□ 0.18
RARA-202ENST00000394081 FAM19A5Q7Z5A7 132 aaPredicted RBP16.16■□□□□ 0.18
RARA-202ENST00000394081 hADV29S1A0JD25 119 aa16.15■□□□□ 0.18
RARA-202ENST00000394081 C14orf132Q9NPU4 83 aa16.15■□□□□ 0.18
RARA-202ENST00000394081 SLURP1P55000 103 aa16.14■□□□□ 0.17
RARA-202ENST00000394081 TMEM243Q9BU79 118 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms