RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 MYO18BQ8IUG5 2567 aa11.89□□□□□ -0.51
CNP-201ENST00000393888 AVPP01185 164 aa11.88□□□□□ -0.51
CNP-201ENST00000393888 COX7A2LO14548 114 aa11.88□□□□□ -0.51
CNP-201ENST00000393888 CIRBPQ14011 172 aaKnown RBP11.88□□□□□ -0.51
CNP-201ENST00000393888 DGAT2L7PQ6IED9 249 aa11.88□□□□□ -0.51
CNP-201ENST00000393888 TIMM17BO60830 172 aa11.87□□□□□ -0.51
CNP-201ENST00000393888 PPDPFQ9H3Y8 114 aa11.87□□□□□ -0.51
CNP-201ENST00000393888 DEFB131AP59861 70 aa11.86□□□□□ -0.51
CNP-201ENST00000393888 CFAP161Q6P656 301 aa11.86□□□□□ -0.51
CNP-201ENST00000393888 FAM208BQ5VWN6 2430 aa11.86□□□□□ -0.51
CNP-201ENST00000393888 BAALC-AS2P0C853 105 aa11.86□□□□□ -0.51
CNP-201ENST00000393888 FAM218AQ96MZ4 157 aa11.86□□□□□ -0.51
CNP-201ENST00000393888 USP9XQ93008 2570 aaPredicted RBP11.85□□□□□ -0.51
CNP-201ENST00000393888 IGHV3OR16-12A0A075B7B8 117 aa11.85□□□□□ -0.51
CNP-201ENST00000393888 RBMY1BA6NDE4 496 aaKnown RBP11.85□□□□□ -0.51
CNP-201ENST00000393888 RBMY1EA6NEQ0 496 aaKnown RBP11.85□□□□□ -0.51
CNP-201ENST00000393888 IGHV4-59P01825 116 aa11.85□□□□□ -0.51
CNP-201ENST00000393888 RBMY1DP0C7P1 496 aaKnown RBP11.85□□□□□ -0.51
CNP-201ENST00000393888 C9orf153Q5TBE3 101 aa11.84□□□□□ -0.51
CNP-201ENST00000393888 Q9HAA7 133 aa11.84□□□□□ -0.51
CNP-201ENST00000393888 EDA2RQ9HAV5 297 aa11.84□□□□□ -0.51
CNP-201ENST00000393888 TRAV13-1A0A0B4J241 112 aa11.84□□□□□ -0.51
CNP-201ENST00000393888 LINC00694P0DN24 101 aa11.84□□□□□ -0.51
CNP-201ENST00000393888 HOXD3P31249 432 aaPredicted RBP11.84□□□□□ -0.51
CNP-201ENST00000393888 PIK3CD-AS1Q5SR53 167 aa11.84□□□□□ -0.51
CNP-201ENST00000393888 PIMREGQ9BSJ6 248 aa11.84□□□□□ -0.51
CNP-201ENST00000393888 KLK5Q9Y337 293 aaPredicted RBP11.84□□□□□ -0.51
CNP-201ENST00000393888 UTP20O75691 2785 aaKnown RBP11.84□□□□□ -0.51
CNP-201ENST00000393888 LINC00242Q5T6M2 205 aa11.83□□□□□ -0.52
CNP-201ENST00000393888 VPREB3Q9UKI3 123 aa11.83□□□□□ -0.52
CNP-201ENST00000393888 C22orf24Q9Y442 160 aa11.83□□□□□ -0.52
CNP-201ENST00000393888 ACYP1P07311 99 aa11.83□□□□□ -0.52
CNP-201ENST00000393888 IGHV4-30-2A0A087WSY4 118 aa11.82□□□□□ -0.52
CNP-201ENST00000393888 TIRAPP58753 221 aa11.82□□□□□ -0.52
CNP-201ENST00000393888 TMEM126AQ9H061 195 aa11.82□□□□□ -0.52
CNP-201ENST00000393888 RS1O15537 224 aa11.82□□□□□ -0.52
CNP-201ENST00000393888 DEFB136Q30KP8 78 aa11.82□□□□□ -0.52
CNP-201ENST00000393888 BEAN1Q3B7T3 259 aa11.82□□□□□ -0.52
CNP-201ENST00000393888 GAGE2AQ6NT46 116 aa11.82□□□□□ -0.52
CNP-201ENST00000393888 LINC00643Q86TS7 51 aa11.82□□□□□ -0.52
CNP-201ENST00000393888 PRIMA1Q86XR5 153 aa11.82□□□□□ -0.52
CNP-201ENST00000393888 IGLV5-45A0A087WSX0 123 aa11.81□□□□□ -0.52
CNP-201ENST00000393888 HIST2H2BDQ6DRA6 164 aa11.8□□□□□ -0.52
CNP-201ENST00000393888 C3orf22Q8N5N4 141 aa11.8□□□□□ -0.52
CNP-201ENST00000393888 C2CD3Q4AC94 2353 aa11.8□□□□□ -0.52
CNP-201ENST00000393888 LOC107984640A0A0U1RRK4 108 aa11.8□□□□□ -0.52
CNP-201ENST00000393888 SMIM1B2RUZ4 78 aa11.8□□□□□ -0.52
CNP-201ENST00000393888 ZNF415Q09FC8 603 aa11.8□□□□□ -0.52
CNP-201ENST00000393888 IMUPQ9GZP8 106 aa11.8□□□□□ -0.52
CNP-201ENST00000393888 IGLV5-39A0A0G2JS06 123 aa11.79□□□□□ -0.52
CNP-201ENST00000393888 IGHV3-53P01767 116 aa11.79□□□□□ -0.52
CNP-201ENST00000393888 DEFB112Q30KQ8 113 aa11.79□□□□□ -0.52
CNP-201ENST00000393888 C18orf65Q6ZTR6 163 aa11.79□□□□□ -0.52
CNP-201ENST00000393888 MSMBP08118 114 aa11.79□□□□□ -0.52
CNP-201ENST00000393888 SLURP1P55000 103 aa11.79□□□□□ -0.52
CNP-201ENST00000393888 C10orf105Q8TEF2 133 aa11.79□□□□□ -0.52
CNP-201ENST00000393888 HERVK_113P63121 156 aa11.78□□□□□ -0.52
CNP-201ENST00000393888 ZANQ9Y493 2812 aa11.78□□□□□ -0.52
CNP-201ENST00000393888 NOTCH3Q9UM47 2321 aa11.78□□□□□ -0.52
CNP-201ENST00000393888 RNF152Q8N8N0 203 aa11.77□□□□□ -0.53
CNP-201ENST00000393888 C11orf72Q8NBR9 251 aa11.77□□□□□ -0.53
CNP-201ENST00000393888 LRRK2Q5S007 2527 aa11.77□□□□□ -0.53
CNP-201ENST00000393888 C9orf129Q5T035 196 aaKnown RBP11.76□□□□□ -0.53
CNP-201ENST00000393888 TRACP01848 142 aa11.76□□□□□ -0.53
CNP-201ENST00000393888 ATP5J2P56134 94 aa11.76□□□□□ -0.53
CNP-201ENST00000393888 CCL19Q99731 98 aa11.76□□□□□ -0.53
CNP-201ENST00000393888 UBR5O95071 2799 aaPredicted RBP11.76□□□□□ -0.53
CNP-201ENST00000393888 DOPEY1Q5JWR5 2465 aa11.75□□□□□ -0.53
CNP-201ENST00000393888 UQCRQO14949 82 aa11.75□□□□□ -0.53
CNP-201ENST00000393888 TMEM89A2RUT3 159 aa11.74□□□□□ -0.53
CNP-201ENST00000393888 SDIM1Q6ZPB5 146 aa11.74□□□□□ -0.53
CNP-201ENST00000393888 DNAJC30Q96LL9 226 aa11.74□□□□□ -0.53
CNP-201ENST00000393888 PEMTQ9UBM1 199 aa11.74□□□□□ -0.53
CNP-201ENST00000393888 MALP21145 153 aa11.74□□□□□ -0.53
CNP-201ENST00000393888 Q96MF0 132 aa11.74□□□□□ -0.53
CNP-201ENST00000393888 AKAP9Q99996 3911 aa11.73□□□□□ -0.53
CNP-201ENST00000393888 C5orf38Q86SI9 138 aa11.73□□□□□ -0.53
CNP-201ENST00000393888 LINC00526Q96FQ7 95 aa11.73□□□□□ -0.53
CNP-201ENST00000393888 XCL2Q9UBD3 114 aa11.73□□□□□ -0.53
CNP-201ENST00000393888 NTM-AS1Q6ZSK4 140 aa11.73□□□□□ -0.53
CNP-201ENST00000393888 TENM4Q6N022 2769 aa11.72□□□□□ -0.53
CNP-201ENST00000393888 A0A087WYN8 130 aa11.72□□□□□ -0.53
CNP-201ENST00000393888 LINC00337Q8N6G1 96 aa11.72□□□□□ -0.53
CNP-201ENST00000393888 MAPK1IP1LQ8NDC0 245 aa11.72□□□□□ -0.53
CNP-201ENST00000393888 UBE2E2Q96LR5 201 aa11.72□□□□□ -0.53
CNP-201ENST00000393888 MXRA5Q9NR99 2828 aa11.72□□□□□ -0.53
CNP-201ENST00000393888 IGKV3D-7A0A0C4DH55 119 aa11.72□□□□□ -0.53
CNP-201ENST00000393888 F5H768 121 aa11.72□□□□□ -0.53
CNP-201ENST00000393888 HIST2H2BCQ6DN03 193 aa11.72□□□□□ -0.53
CNP-201ENST00000393888 C14orf132Q9NPU4 83 aa11.72□□□□□ -0.53
CNP-201ENST00000393888 TRGV1A0A0A0MS02 117 aa11.71□□□□□ -0.53
CNP-201ENST00000393888 IGKV3OR2-268A0A0C4DH90 116 aa11.71□□□□□ -0.53
CNP-201ENST00000393888 TOMM7Q9P0U1 55 aa11.71□□□□□ -0.53
CNP-201ENST00000393888 ATP5G1P05496 136 aa11.71□□□□□ -0.54
CNP-201ENST00000393888 COPS9Q8WXC6 57 aa11.71□□□□□ -0.54
CNP-201ENST00000393888 NRGNQ92686 78 aa11.71□□□□□ -0.54
CNP-201ENST00000393888 CYSTM1Q9H1C7 97 aa11.71□□□□□ -0.54
CNP-201ENST00000393888 MIR7-3HGQ8N6C7 128 aa11.7□□□□□ -0.54
CNP-201ENST00000393888 USP9YO00507 2555 aaPredicted RBP11.7□□□□□ -0.54
CNP-201ENST00000393888 COX7CP15954 63 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms