RNA–Protein interactions for RNA: ENST00000393410.5

MDM2-208, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-208ENST00000393410 C9orf153Q5TBE3 101 aa0.05□□□□□ -2.4
MDM2-208ENST00000393410 MRPL54Q6P161 138 aaKnown RBP0.05□□□□□ -2.4
MDM2-208ENST00000393410 SPAG11AQ6PDA7 123 aa0.05□□□□□ -2.4
MDM2-208ENST00000393410 LENEPQ9Y5L5 61 aa0.05□□□□□ -2.4
MDM2-208ENST00000393410 GVINP1Q7Z2Y8 2422 aa0.05□□□□□ -2.4
MDM2-208ENST00000393410 TOPAZ1Q8N9V7 1692 aa0.05□□□□□ -2.4
MDM2-208ENST00000393410 URB1O60287 2271 aaKnown RBP0.04□□□□□ -2.4
MDM2-208ENST00000393410 HIVEP3Q5T1R4 2406 aa0.04□□□□□ -2.4
MDM2-208ENST00000393410 EIF4G3O43432 1585 aaKnown RBP0.04□□□□□ -2.4
MDM2-208ENST00000393410 NRKQ7Z2Y5 1582 aa0.04□□□□□ -2.4
MDM2-208ENST00000393410 BCE1O60756 84 aa0.04□□□□□ -2.4
MDM2-208ENST00000393410 APOC2P02655 101 aa0.04□□□□□ -2.4
MDM2-208ENST00000393410 COMMD6Q7Z4G1 85 aa0.04□□□□□ -2.4
MDM2-208ENST00000393410 UBE2DNLQ8IWF7 75 aa0.04□□□□□ -2.4
MDM2-208ENST00000393410 FAM213BQ8TBF2 198 aa0.04□□□□□ -2.4
MDM2-208ENST00000393410 COPS9Q8WXC6 57 aa0.04□□□□□ -2.4
MDM2-208ENST00000393410 SPRR2GQ9BYE4 73 aa0.04□□□□□ -2.4
MDM2-208ENST00000393410 PKDREJQ9NTG1 2253 aa0.04□□□□□ -2.4
MDM2-208ENST00000393410 NEBP20929 6669 aa0.04□□□□□ -2.4
MDM2-208ENST00000393410 VWFP04275 2813 aa0.04□□□□□ -2.4
MDM2-208ENST00000393410 TSC2P49815 1807 aa0.03□□□□□ -2.4
MDM2-208ENST00000393410 ZFHX3Q15911 3703 aa0.03□□□□□ -2.4
MDM2-208ENST00000393410 ANKRD36A6QL64 1941 aa0.03□□□□□ -2.4
MDM2-208ENST00000393410 CORTO00230 105 aa0.03□□□□□ -2.4
MDM2-208ENST00000393410 HMGN4O00479 90 aa0.03□□□□□ -2.4
MDM2-208ENST00000393410 SNAPC5O75971 98 aa0.03□□□□□ -2.4
MDM2-208ENST00000393410 TNFP01375 233 aa0.03□□□□□ -2.4
MDM2-208ENST00000393410 IFNGP01579 166 aa0.03□□□□□ -2.4
MDM2-208ENST00000393410 PPP3R2Q96LZ3 170 aa0.03□□□□□ -2.4
MDM2-208ENST00000393410 AQP10Q96PS8 301 aa0.03□□□□□ -2.4
MDM2-208ENST00000393410 DPH3P1Q9H4G8 78 aa0.03□□□□□ -2.4
MDM2-208ENST00000393410 V9GYH0 126 aa0.03□□□□□ -2.4
MDM2-208ENST00000393410 NUP188Q5SRE5 1749 aa0.03□□□□□ -2.4
MDM2-208ENST00000393410 PDCD11Q14690 1871 aaKnown RBP0.03□□□□□ -2.41
MDM2-208ENST00000393410 SHANK2Q9UPX8 1470 aa0.03□□□□□ -2.41
MDM2-208ENST00000393410 HMGXB3Q12766 1538 aa0.03□□□□□ -2.41
MDM2-208ENST00000393410 TOP2BQ02880 1626 aa0.02□□□□□ -2.41
MDM2-208ENST00000393410 CHD6Q8TD26 2715 aa0.02□□□□□ -2.41
MDM2-208ENST00000393410 GOLGA4Q13439 2230 aaKnown RBP0.02□□□□□ -2.41
MDM2-208ENST00000393410 PPRC1Q5VV67 1664 aaKnown RBP0.02□□□□□ -2.41
MDM2-208ENST00000393410 CTXND1A0A1B0GTU2 59 aa0.02□□□□□ -2.41
MDM2-208ENST00000393410 IGLC7A0M8Q6 106 aa0.02□□□□□ -2.41
MDM2-208ENST00000393410 F6UZH7 168 aa0.02□□□□□ -2.41
MDM2-208ENST00000393410 Q5BKY6 102 aa0.02□□□□□ -2.41
MDM2-208ENST00000393410 CNFNQ9BYD5 112 aa0.02□□□□□ -2.41
MDM2-208ENST00000393410 SCP2D1Q9UJQ7 156 aa0.02□□□□□ -2.41
MDM2-208ENST00000393410 R4GMQ9 66 aa0.02□□□□□ -2.41
MDM2-208ENST00000393410 ZNF609O15014 1411 aa0.02□□□□□ -2.41
MDM2-208ENST00000393410 NAIPQ13075 1403 aa0.02□□□□□ -2.41
MDM2-208ENST00000393410 C10orf71Q711Q0 1435 aa0.02□□□□□ -2.41
MDM2-208ENST00000393410 PAPPAQ13219 1627 aa0.02□□□□□ -2.41
MDM2-208ENST00000393410 TPPP2P59282 170 aa0.01□□□□□ -2.41
MDM2-208ENST00000393410 CYP4F30PQ9H0H9 118 aa0.01□□□□□ -2.41
MDM2-208ENST00000393410 NPVFQ9HCQ7 196 aa0.01□□□□□ -2.41
MDM2-208ENST00000393410 NSD3Q9BZ95 1437 aa0.01□□□□□ -2.41
MDM2-208ENST00000393410 I3L2K1 104 aa0□□□□□ -2.41
MDM2-208ENST00000393410 DNAJC13O75165 2243 aa0□□□□□ -2.41
MDM2-208ENST00000393410 S100A1P23297 94 aa0□□□□□ -2.41
MDM2-208ENST00000393410 COL7A1Q02388 2944 aa0□□□□□ -2.41
MDM2-208ENST00000393410 KTN1Q86UP2 1357 aaKnown RBP0□□□□□ -2.41
MDM2-208ENST00000393410 MGST2Q99735 147 aa0□□□□□ -2.41
MDM2-208ENST00000393410 DYNLRB1Q9NP97 96 aa0□□□□□ -2.41
MDM2-208ENST00000393410 CDC42SE2Q9NRR3 84 aa0□□□□□ -2.41
MDM2-208ENST00000393410 PRO0255Q9UI72 69 aa0□□□□□ -2.41
MDM2-208ENST00000393410 LINC01558Q9Y6Z2 57 aa0□□□□□ -2.41
MDM2-208ENST00000393410 ABCA2Q9BZC7 2435 aa-0.01□□□□□ -2.41
MDM2-208ENST00000393410 CSPG4Q6UVK1 2322 aa-0.01□□□□□ -2.41
MDM2-208ENST00000393410 PAPPA2Q9BXP8 1791 aa-0.01□□□□□ -2.41
MDM2-208ENST00000393410 SMG6Q86US8 1419 aaKnown RBP-0.01□□□□□ -2.41
MDM2-208ENST00000393410 SCAPERQ9BY12 1400 aa-0.01□□□□□ -2.41
MDM2-208ENST00000393410 F8VRH5 84 aa-0.01□□□□□ -2.41
MDM2-208ENST00000393410 C8orf59Q8N0T1 100 aaPredicted RBP-0.01□□□□□ -2.41
MDM2-208ENST00000393410 MYOZ3Q8TDC0 251 aa-0.01□□□□□ -2.41
MDM2-208ENST00000393410 IER3IP1Q9Y5U9 82 aa-0.01□□□□□ -2.41
MDM2-208ENST00000393410 RAPGEF6Q8TEU7 1601 aa-0.02□□□□□ -2.41
MDM2-208ENST00000393410 ERCC6L2Q5T890 1561 aa-0.02□□□□□ -2.41
MDM2-208ENST00000393410 MYCBP2O75592 4640 aa-0.02□□□□□ -2.41
MDM2-208ENST00000393410 ZFYVE16Q7Z3T8 1539 aa-0.02□□□□□ -2.41
MDM2-208ENST00000393410 TRAV22A0A0B4J277 110 aa-0.02□□□□□ -2.41
MDM2-208ENST00000393410 SSSCA1O60232 199 aa-0.02□□□□□ -2.41
MDM2-208ENST00000393410 GNG4P50150 75 aa-0.02□□□□□ -2.41
MDM2-208ENST00000393410 PPP3R1P63098 170 aa-0.02□□□□□ -2.41
MDM2-208ENST00000393410 BAGE2Q86Y30 109 aa-0.02□□□□□ -2.41
MDM2-208ENST00000393410 GNG8Q9UK08 70 aa-0.02□□□□□ -2.41
MDM2-208ENST00000393410 NHSL1Q5SYE7 1610 aa-0.02□□□□□ -2.41
MDM2-208ENST00000393410 TNXBP22105 4242 aa-0.03□□□□□ -2.41
MDM2-208ENST00000393410 KMT2AQ03164 3969 aa-0.03□□□□□ -2.41
MDM2-208ENST00000393410 UBE2L5PA0A1B0GUS4 154 aa-0.03□□□□□ -2.41
MDM2-208ENST00000393410 CHKB-CPT1BH3BT56 60 aa-0.03□□□□□ -2.41
MDM2-208ENST00000393410 PIN1P1O15428 100 aa-0.03□□□□□ -2.41
MDM2-208ENST00000393410 UBE2L3P68036 154 aaKnown RBP-0.03□□□□□ -2.41
MDM2-208ENST00000393410 SFTA2Q6UW10 78 aa-0.03□□□□□ -2.41
MDM2-208ENST00000393410 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.03□□□□□ -2.41
MDM2-208ENST00000393410 PIEZO2Q9H5I5 2752 aa-0.03□□□□□ -2.41
MDM2-208ENST00000393410 PCLOQ9Y6V0 5065 aa-0.03□□□□□ -2.41
MDM2-208ENST00000393410 ARHGAP5Q13017 1502 aa-0.03□□□□□ -2.41
MDM2-208ENST00000393410 EHBP1L1Q8N3D4 1523 aa-0.03□□□□□ -2.41
MDM2-208ENST00000393410 MARF1Q9Y4F3 1742 aaKnown RBP-0.04□□□□□ -2.42
MDM2-208ENST00000393410 FAT2Q9NYQ8 4349 aa-0.04□□□□□ -2.42
MDM2-208ENST00000393410 SPINK1P00995 79 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms