RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 CKS2P33552 79 aa5.01□□□□□ -1.61
HMGB3P1-201ENST00000393368 SUMO2P61956 95 aaKnown RBP5.01□□□□□ -1.61
HMGB3P1-201ENST00000393368 ANAPC16Q96DE5 110 aa5.01□□□□□ -1.61
HMGB3P1-201ENST00000393368 C7orf77A4D0Y5 90 aa5□□□□□ -1.61
HMGB3P1-201ENST00000393368 GAGE12HA6NDE8 117 aa5□□□□□ -1.61
HMGB3P1-201ENST00000393368 VCYO14598 125 aa5□□□□□ -1.61
HMGB3P1-201ENST00000393368 TNFRSF6BO95407 300 aa5□□□□□ -1.61
HMGB3P1-201ENST00000393368 PRSS1P07477 247 aa5□□□□□ -1.61
HMGB3P1-201ENST00000393368 FCER1GP30273 86 aa5□□□□□ -1.61
HMGB3P1-201ENST00000393368 RNASE13Q5GAN3 156 aaKnown RBP5□□□□□ -1.61
HMGB3P1-201ENST00000393368 UQCC3Q6UW78 93 aa5□□□□□ -1.61
HMGB3P1-201ENST00000393368 TCAPO15273 167 aa4.99□□□□□ -1.61
HMGB3P1-201ENST00000393368 S100A8P05109 93 aa4.99□□□□□ -1.61
HMGB3P1-201ENST00000393368 ATP5L2Q7Z4Y8 100 aa4.99□□□□□ -1.61
HMGB3P1-201ENST00000393368 Q8N1X5 172 aa4.99□□□□□ -1.61
HMGB3P1-201ENST00000393368 OR5A1Q8NGJ0 315 aa4.99□□□□□ -1.61
HMGB3P1-201ENST00000393368 CHCHD10Q8WYQ3 142 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P1-201ENST00000393368 TRBV24-1A0A075B6N3 115 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 TRAV8-4A0A0B4J246 113 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 LOC389332A0A1B0GUA5 103 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 LINC00862A6NCI5 91 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 H7C423 109 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 PPP1R17O96001 155 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 ZNF25P17030 456 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 XCL1P47992 114 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 RPL39P62891 51 aaKnown RBP4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 TMEM136Q6ZRR5 245 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 ORMDL3Q8N138 153 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 TMEM101Q96IK0 257 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 BTF3L4Q96K17 158 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 PRELID3AQ96N28 172 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 KIR2DL4Q99706 377 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 C20orf78Q9BR46 151 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 SMIM2Q9BVW6 85 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 KRTAP4-8Q9BYQ9 185 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 UBE2D4Q9Y2X8 147 aa4.98□□□□□ -1.61
HMGB3P1-201ENST00000393368 LINC00959A0A1B0GUT2 108 aa4.97□□□□□ -1.61
HMGB3P1-201ENST00000393368 hDV102S1A0JD36 115 aa4.97□□□□□ -1.61
HMGB3P1-201ENST00000393368 CCL25O15444 150 aa4.97□□□□□ -1.61
HMGB3P1-201ENST00000393368 SLPIP03973 132 aa4.97□□□□□ -1.61
HMGB3P1-201ENST00000393368 FOXI1Q12951 378 aa4.97□□□□□ -1.61
HMGB3P1-201ENST00000393368 HIGD2BQ4VC39 106 aa4.97□□□□□ -1.61
HMGB3P1-201ENST00000393368 C14orf177Q52M58 125 aa4.97□□□□□ -1.61
HMGB3P1-201ENST00000393368 Q6ZUT4 128 aa4.97□□□□□ -1.61
HMGB3P1-201ENST00000393368 MRPL52Q86TS9 123 aaKnown RBP4.97□□□□□ -1.61
HMGB3P1-201ENST00000393368 ZNF664Q8N3J9 261 aa4.97□□□□□ -1.61
HMGB3P1-201ENST00000393368 C15orf56Q8N910 161 aa4.97□□□□□ -1.61
HMGB3P1-201ENST00000393368 OPRPNQ99935 248 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P1-201ENST00000393368 SEC11CQ9BY50 192 aa4.97□□□□□ -1.61
HMGB3P1-201ENST00000393368 CDC42SE2Q9NRR3 84 aa4.97□□□□□ -1.61
HMGB3P1-201ENST00000393368 PPBPP02775 128 aa4.96□□□□□ -1.62
HMGB3P1-201ENST00000393368 KIAA1644Q3SXP7 199 aa4.96□□□□□ -1.62
HMGB3P1-201ENST00000393368 Q5VSD8 79 aa4.96□□□□□ -1.62
HMGB3P1-201ENST00000393368 DGAT2L7PQ6IED9 249 aa4.96□□□□□ -1.62
HMGB3P1-201ENST00000393368 Q6ZSA8 131 aa4.96□□□□□ -1.62
HMGB3P1-201ENST00000393368 SCXQ7RTU7 201 aa4.96□□□□□ -1.62
HMGB3P1-201ENST00000393368 LINC00526Q96FQ7 95 aa4.96□□□□□ -1.62
HMGB3P1-201ENST00000393368 TRAV13-1A0A0B4J241 112 aa4.95□□□□□ -1.62
HMGB3P1-201ENST00000393368 EPM2AB3EWF7 344 aa4.95□□□□□ -1.62
HMGB3P1-201ENST00000393368 PANO1I0J062 215 aa4.95□□□□□ -1.62
HMGB3P1-201ENST00000393368 PHOX2AO14813 284 aa4.95□□□□□ -1.62
HMGB3P1-201ENST00000393368 RPL32P62910 135 aaKnown RBP4.95□□□□□ -1.62
HMGB3P1-201ENST00000393368 C10orf91Q5T1B1 145 aa4.95□□□□□ -1.62
HMGB3P1-201ENST00000393368 FAM104AQ969W3 186 aa4.95□□□□□ -1.62
HMGB3P1-201ENST00000393368 IMMP2LQ96T52 175 aa4.95□□□□□ -1.62
HMGB3P1-201ENST00000393368 CTDSP1Q9GZU7 261 aa4.95□□□□□ -1.62
HMGB3P1-201ENST00000393368 MAP1LC3AQ9H492 121 aa4.95□□□□□ -1.62
HMGB3P1-201ENST00000393368 RPS10P5Q9NQ39 176 aa4.95□□□□□ -1.62
HMGB3P1-201ENST00000393368 CARHSP1Q9Y2V2 147 aaKnown RBP4.95□□□□□ -1.62
HMGB3P1-201ENST00000393368 SS18Q15532 418 aa4.94□□□□□ -1.62
HMGB3P1-201ENST00000393368 CLRN3Q8NCR9 226 aa4.94□□□□□ -1.62
HMGB3P1-201ENST00000393368 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P1-201ENST00000393368 MYCBP2O75592 4640 aa4.93□□□□□ -1.62
HMGB3P1-201ENST00000393368 APOC3P02656 99 aa4.93□□□□□ -1.62
HMGB3P1-201ENST00000393368 CHTF8P0CG12 524 aa4.93□□□□□ -1.62
HMGB3P1-201ENST00000393368 RAB5AP20339 215 aa4.93□□□□□ -1.62
HMGB3P1-201ENST00000393368 S100PP25815 95 aa4.93□□□□□ -1.62
HMGB3P1-201ENST00000393368 CNBPP62633 177 aaKnown RBP4.93□□□□□ -1.62
HMGB3P1-201ENST00000393368 ZC2HC1BQ5TFG8 222 aa4.93□□□□□ -1.62
HMGB3P1-201ENST00000393368 Q8N8P6 123 aa4.93□□□□□ -1.62
HMGB3P1-201ENST00000393368 C9orf163Q8N9P6 203 aa4.93□□□□□ -1.62
HMGB3P1-201ENST00000393368 CIRBP-AS1Q8TBR5 109 aa4.93□□□□□ -1.62
HMGB3P1-201ENST00000393368 TMEM18Q96B42 140 aa4.93□□□□□ -1.62
HMGB3P1-201ENST00000393368 CHAC1Q9BUX1 264 aa4.93□□□□□ -1.62
HMGB3P1-201ENST00000393368 AP5S1Q9NUS5 200 aa4.93□□□□□ -1.62
HMGB3P1-201ENST00000393368 CSDC2Q9Y534 153 aaKnown RBP4.93□□□□□ -1.62
HMGB3P1-201ENST00000393368 GVQW2A0A096LPI5 108 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P1-201ENST00000393368 TGIF2-C20orf24A0A0A6YYL0 155 aa4.92□□□□□ -1.62
HMGB3P1-201ENST00000393368 IFITM10A6NMD0 228 aa4.92□□□□□ -1.62
HMGB3P1-201ENST00000393368 IFI27P40305 119 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P1-201ENST00000393368 SMAGPQ0VAQ4 97 aa4.92□□□□□ -1.62
HMGB3P1-201ENST00000393368 RHEBQ15382 184 aa4.92□□□□□ -1.62
HMGB3P1-201ENST00000393368 CD164L2Q6UWJ8 174 aa4.92□□□□□ -1.62
HMGB3P1-201ENST00000393368 C5orf38Q86SI9 138 aa4.92□□□□□ -1.62
HMGB3P1-201ENST00000393368 TIMM21Q9BVV7 248 aa4.92□□□□□ -1.62
HMGB3P1-201ENST00000393368 SPANXA1Q9NS26 97 aa4.92□□□□□ -1.62
HMGB3P1-201ENST00000393368 LAMTOR2Q9Y2Q5 125 aa4.92□□□□□ -1.62
HMGB3P1-201ENST00000393368 SRRM2Q9UQ35 2752 aaKnown RBP4.91□□□□□ -1.62
HMGB3P1-201ENST00000393368 IGLV4-3A0A075B6K6 122 aa4.91□□□□□ -1.62
HMGB3P1-201ENST00000393368 IGHV3-64A0A075B6Q5 118 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms