RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 DEFB130AP0DP74 79 aa7.81□□□□□ -1.16
CALD1-203ENST00000393118 CFAP46Q8IYW2 2715 aa7.81□□□□□ -1.16
CALD1-203ENST00000393118 HRCT1Q6UXD1 115 aa7.81□□□□□ -1.16
CALD1-203ENST00000393118 RHOHQ15669 191 aa7.8□□□□□ -1.16
CALD1-203ENST00000393118 C3orf22Q8N5N4 141 aa7.8□□□□□ -1.16
CALD1-203ENST00000393118 CITED2Q99967 270 aaPredicted RBP7.8□□□□□ -1.16
CALD1-203ENST00000393118 IGLV2-18A0A075B6J9 118 aa7.8□□□□□ -1.16
CALD1-203ENST00000393118 UQCRQO14949 82 aa7.8□□□□□ -1.16
CALD1-203ENST00000393118 FLNAP21333 2647 aaKnown RBP7.8□□□□□ -1.16
CALD1-203ENST00000393118 HECTD1Q9ULT8 2610 aa7.8□□□□□ -1.16
CALD1-203ENST00000393118 MAP6D1Q9H9H5 199 aa7.79□□□□□ -1.16
CALD1-203ENST00000393118 NOP10Q9NPE3 64 aaKnown RBP7.79□□□□□ -1.16
CALD1-203ENST00000393118 HRNRQ86YZ3 2850 aaPredicted RBP7.79□□□□□ -1.16
CALD1-203ENST00000393118 NDUFA12Q9UI09 145 aa7.79□□□□□ -1.16
CALD1-203ENST00000393118 ICOSQ9Y6W8 199 aa7.79□□□□□ -1.16
CALD1-203ENST00000393118 A0A0J9YY99 117 aa7.79□□□□□ -1.16
CALD1-203ENST00000393118 M0QY20 66 aa7.79□□□□□ -1.16
CALD1-203ENST00000393118 C20orf203Q8NBC4 194 aa7.79□□□□□ -1.16
CALD1-203ENST00000393118 TIMM17AQ99595 171 aa7.79□□□□□ -1.16
CALD1-203ENST00000393118 LGALS9O00182 355 aa7.78□□□□□ -1.16
CALD1-203ENST00000393118 HTN3P15516 51 aa7.78□□□□□ -1.16
CALD1-203ENST00000393118 DNAJC9-AS1A6NH13 148 aa7.78□□□□□ -1.16
CALD1-203ENST00000393118 DAND5Q8N907 189 aa7.78□□□□□ -1.16
CALD1-203ENST00000393118 J3QKU1 62 aa7.77□□□□□ -1.17
CALD1-203ENST00000393118 CRYGDP07320 174 aa7.77□□□□□ -1.17
CALD1-203ENST00000393118 DCHS2Q6V1P9 2916 aa7.77□□□□□ -1.17
CALD1-203ENST00000393118 POLR2KP53803 58 aaKnown RBP7.77□□□□□ -1.17
CALD1-203ENST00000393118 C4orf3Q8WVX3 66 aa7.77□□□□□ -1.17
CALD1-203ENST00000393118 IGHV3-33P01772 117 aa7.77□□□□□ -1.17
CALD1-203ENST00000393118 NHLRC4P0CG21 123 aaPredicted RBP7.77□□□□□ -1.17
CALD1-203ENST00000393118 Q6ZSV7 163 aa7.77□□□□□ -1.17
CALD1-203ENST00000393118 C11orf68Q9H3H3 251 aaKnown RBP7.77□□□□□ -1.17
CALD1-203ENST00000393118 RNF152Q8N8N0 203 aa7.76□□□□□ -1.17
CALD1-203ENST00000393118 MRAPQ8TCY5 172 aa7.76□□□□□ -1.17
CALD1-203ENST00000393118 ATOX1O00244 68 aa7.76□□□□□ -1.17
CALD1-203ENST00000393118 ZNF22P17026 224 aaPredicted RBP7.76□□□□□ -1.17
CALD1-203ENST00000393118 DEFB114Q30KQ6 69 aa7.76□□□□□ -1.17
CALD1-203ENST00000393118 PRIMA1Q86XR5 153 aa7.76□□□□□ -1.17
CALD1-203ENST00000393118 DSCR8Q96T75 97 aa7.76□□□□□ -1.17
CALD1-203ENST00000393118 USP24Q9UPU5 2620 aa7.76□□□□□ -1.17
CALD1-203ENST00000393118 TRIAP1O43715 76 aa7.76□□□□□ -1.17
CALD1-203ENST00000393118 ITPR3Q14573 2671 aa7.76□□□□□ -1.17
CALD1-203ENST00000393118 ODF3Q96PU9 254 aa7.76□□□□□ -1.17
CALD1-203ENST00000393118 UBE2D3P61077 147 aa7.75□□□□□ -1.17
CALD1-203ENST00000393118 UBE2D2P62837 147 aa7.75□□□□□ -1.17
CALD1-203ENST00000393118 TRBV27A0A0K0K1C4 114 aa7.75□□□□□ -1.17
CALD1-203ENST00000393118 TINCRA0A1B0GVN0 87 aa7.75□□□□□ -1.17
CALD1-203ENST00000393118 H3BT86 120 aa7.75□□□□□ -1.17
CALD1-203ENST00000393118 CRYBG3Q68DQ2 2970 aa7.75□□□□□ -1.17
CALD1-203ENST00000393118 BAALC-AS2P0C853 105 aa7.75□□□□□ -1.17
CALD1-203ENST00000393118 UBE2D1P51668 147 aa7.75□□□□□ -1.17
CALD1-203ENST00000393118 ZMAT4Q9H898 229 aa7.75□□□□□ -1.17
CALD1-203ENST00000393118 ITPR1Q14643 2758 aa7.75□□□□□ -1.17
CALD1-203ENST00000393118 A0A0U1RQV1 116 aa7.75□□□□□ -1.17
CALD1-203ENST00000393118 INAFM2P0DMQ5 153 aa7.75□□□□□ -1.17
CALD1-203ENST00000393118 Q6Q795 121 aa7.75□□□□□ -1.17
CALD1-203ENST00000393118 C9orf85Q96MD7 179 aa7.75□□□□□ -1.17
CALD1-203ENST00000393118 CSMD1Q96PZ7 3565 aa7.74□□□□□ -1.17
CALD1-203ENST00000393118 ZANQ9Y493 2812 aa7.74□□□□□ -1.17
CALD1-203ENST00000393118 LEPROTO15243 131 aa7.74□□□□□ -1.17
CALD1-203ENST00000393118 SLC25A29Q8N8R3 303 aa7.74□□□□□ -1.17
CALD1-203ENST00000393118 SDIM1Q6ZPB5 146 aa7.74□□□□□ -1.17
CALD1-203ENST00000393118 A0A096LPF7 62 aa7.73□□□□□ -1.17
CALD1-203ENST00000393118 ACYP1P07311 99 aa7.73□□□□□ -1.17
CALD1-203ENST00000393118 LINC00643Q86TS7 51 aa7.73□□□□□ -1.17
CALD1-203ENST00000393118 IGHV3-30P01768 117 aa7.73□□□□□ -1.17
CALD1-203ENST00000393118 IGHV3-30-5P0DP03 117 aa7.73□□□□□ -1.17
CALD1-203ENST00000393118 IGLV4-3A0A075B6K6 122 aa7.73□□□□□ -1.17
CALD1-203ENST00000393118 A0A0B4J2C4 111 aa7.73□□□□□ -1.17
CALD1-203ENST00000393118 Q6ZTI0 123 aa7.73□□□□□ -1.17
CALD1-203ENST00000393118 BRI3O95415 125 aa7.72□□□□□ -1.17
CALD1-203ENST00000393118 TSHBP01222 138 aa7.72□□□□□ -1.17
CALD1-203ENST00000393118 TMEM243Q9BU79 118 aa7.72□□□□□ -1.17
CALD1-203ENST00000393118 WFDC10AQ9H1F0 79 aa7.72□□□□□ -1.17
CALD1-203ENST00000393118 SPENQ96T58 3664 aaKnown RBP7.72□□□□□ -1.17
CALD1-203ENST00000393118 IGIPA6NJ69 53 aa7.72□□□□□ -1.17
CALD1-203ENST00000393118 LRRC75A-AS1Q8N1F1 130 aa7.72□□□□□ -1.17
CALD1-203ENST00000393118 COPS9Q8WXC6 57 aa7.72□□□□□ -1.17
CALD1-203ENST00000393118 TEX15Q9BXT5 2789 aa7.72□□□□□ -1.17
CALD1-203ENST00000393118 FLNBO75369 2602 aaKnown RBP7.72□□□□□ -1.17
CALD1-203ENST00000393118 IGHV3-30-3P0DP02 117 aa7.72□□□□□ -1.17
CALD1-203ENST00000393118 A8MZ25 164 aa7.72□□□□□ -1.17
CALD1-203ENST00000393118 CMC4P56277 68 aaPredicted RBP7.72□□□□□ -1.17
CALD1-203ENST00000393118 LINC00158P58513 81 aa7.72□□□□□ -1.17
CALD1-203ENST00000393118 LINC00467Q9BRT7 94 aa7.71□□□□□ -1.17
CALD1-203ENST00000393118 MUC4Q99102 2169 aa7.71□□□□□ -1.17
CALD1-203ENST00000393118 TRBV6-5A0A0K0K1A5 114 aa7.71□□□□□ -1.18
CALD1-203ENST00000393118 RBM3P98179 157 aaKnown RBP7.71□□□□□ -1.18
CALD1-203ENST00000393118 BRK1Q8WUW1 75 aa7.71□□□□□ -1.18
CALD1-203ENST00000393118 Q9H8V8 135 aa7.71□□□□□ -1.18
CALD1-203ENST00000393118 KIF25-AS1Q9Y6Z4 181 aa7.71□□□□□ -1.18
CALD1-203ENST00000393118 SVEP1Q4LDE5 3571 aa7.71□□□□□ -1.18
CALD1-203ENST00000393118 KLK9Q2XQG4 91 aa7.7□□□□□ -1.18
CALD1-203ENST00000393118 TRAV25A0A0B4J276 109 aa7.7□□□□□ -1.18
CALD1-203ENST00000393118 CRPP02741 224 aa7.7□□□□□ -1.18
CALD1-203ENST00000393118 S100A7L2Q5SY68 101 aa7.7□□□□□ -1.18
CALD1-203ENST00000393118 ZNF575Q86XF7 245 aa7.7□□□□□ -1.18
CALD1-203ENST00000393118 UTP20O75691 2785 aaKnown RBP7.7□□□□□ -1.18
CALD1-203ENST00000393118 RBMY1BA6NDE4 496 aaKnown RBP7.7□□□□□ -1.18
CALD1-203ENST00000393118 RBMY1EA6NEQ0 496 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms