RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 FRAS1Q86XX4 4008 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 LINC01546A6NGU7 62 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 IFITM10A6NMD0 228 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 SMKR1H3BMG3 65 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 UBE2L6O14933 153 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 SERF1AO75920 110 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 GAS8-AS1O95177 125 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 SMIM6P0DI80 62 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 S100A2P29034 98 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 SMAGPQ0VAQ4 97 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 KIAA1644Q3SXP7 199 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 BAGE3Q86Y29 109 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 RMI2Q96E14 147 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 PRELID3AQ96N28 172 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 HIST1H2BLQ99880 126 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 TM2D2Q9BX73 214 aa4.56□□□□□ -1.68
UBBP1-201ENST00000392399 PKD1P98161 4303 aa4.55□□□□□ -1.68
UBBP1-201ENST00000392399 DNAH11Q96DT5 4516 aa4.55□□□□□ -1.68
UBBP1-201ENST00000392399 PRSS29PA6NIE9 313 aa4.55□□□□□ -1.68
UBBP1-201ENST00000392399 K7EMI3 77 aa4.55□□□□□ -1.68
UBBP1-201ENST00000392399 TSHBP01222 138 aa4.55□□□□□ -1.68
UBBP1-201ENST00000392399 ZNF25P17030 456 aaPredicted RBP4.55□□□□□ -1.68
UBBP1-201ENST00000392399 FCER1GP30273 86 aa4.55□□□□□ -1.68
UBBP1-201ENST00000392399 LINC00310P59036 64 aa4.55□□□□□ -1.68
UBBP1-201ENST00000392399 RBX1P62877 108 aa4.55□□□□□ -1.68
UBBP1-201ENST00000392399 GAGE6Q13070 117 aa4.55□□□□□ -1.68
UBBP1-201ENST00000392399 MPV17L2Q567V2 206 aa4.55□□□□□ -1.68
UBBP1-201ENST00000392399 NXT2Q9NPJ8 142 aaKnown RBP4.55□□□□□ -1.68
UBBP1-201ENST00000392399 KLK12Q9UKR0 248 aa4.55□□□□□ -1.68
UBBP1-201ENST00000392399 NPYP01303 97 aa4.54□□□□□ -1.68
UBBP1-201ENST00000392399 CRPP02741 224 aa4.54□□□□□ -1.68
UBBP1-201ENST00000392399 ANGP03950 147 aaKnown RBP4.54□□□□□ -1.68
UBBP1-201ENST00000392399 LINC00614P0C842 121 aa4.54□□□□□ -1.68
UBBP1-201ENST00000392399 MIAQ16674 131 aa4.54□□□□□ -1.68
UBBP1-201ENST00000392399 AMMECR1LQ6DCA0 310 aa4.54□□□□□ -1.68
UBBP1-201ENST00000392399 Q6ZRN7 208 aaPredicted RBP4.54□□□□□ -1.68
UBBP1-201ENST00000392399 MRPL52Q86TS9 123 aaKnown RBP4.54□□□□□ -1.68
UBBP1-201ENST00000392399 Q8N976 141 aa4.54□□□□□ -1.68
UBBP1-201ENST00000392399 UBE2WQ96B02 151 aa4.54□□□□□ -1.68
UBBP1-201ENST00000392399 TMEM101Q96IK0 257 aa4.54□□□□□ -1.68
UBBP1-201ENST00000392399 SMIM2Q9BVW6 85 aa4.54□□□□□ -1.68
UBBP1-201ENST00000392399 MAP1LC3AQ9H492 121 aa4.54□□□□□ -1.68
UBBP1-201ENST00000392399 PRR34Q9NV39 138 aa4.54□□□□□ -1.68
UBBP1-201ENST00000392399 TRAV8-4A0A0B4J246 113 aa4.53□□□□□ -1.68
UBBP1-201ENST00000392399 PSCAO43653 123 aa4.53□□□□□ -1.68
UBBP1-201ENST00000392399 HSBP1O75506 76 aa4.53□□□□□ -1.68
UBBP1-201ENST00000392399 FGF6P10767 208 aa4.53□□□□□ -1.68
UBBP1-201ENST00000392399 FABP4P15090 132 aa4.53□□□□□ -1.68
UBBP1-201ENST00000392399 G0S2P27469 103 aa4.53□□□□□ -1.68
UBBP1-201ENST00000392399 AKR1D1P51857 326 aa4.53□□□□□ -1.68
UBBP1-201ENST00000392399 LINC00269Q8N2A0 174 aa4.53□□□□□ -1.68
UBBP1-201ENST00000392399 C20orf203Q8NBC4 194 aa4.53□□□□□ -1.68
UBBP1-201ENST00000392399 DEFB104AQ8WTQ1 72 aa4.53□□□□□ -1.68
UBBP1-201ENST00000392399 URB1-AS1Q96HZ7 61 aa4.53□□□□□ -1.68
UBBP1-201ENST00000392399 Q9HAA7 133 aa4.53□□□□□ -1.68
UBBP1-201ENST00000392399 AP5S1Q9NUS5 200 aa4.53□□□□□ -1.68
UBBP1-201ENST00000392399 CSDC2Q9Y534 153 aaKnown RBP4.53□□□□□ -1.68
UBBP1-201ENST00000392399 EPPK1P58107 5090 aaKnown RBP4.52□□□□□ -1.69
UBBP1-201ENST00000392399 IGLV4-60A0A075B6I1 120 aa4.52□□□□□ -1.69
UBBP1-201ENST00000392399 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.52□□□□□ -1.69
UBBP1-201ENST00000392399 IGKV2-29A2NJV5 120 aaPredicted RBP4.52□□□□□ -1.69
UBBP1-201ENST00000392399 LINC01549A6NIU2 74 aa4.52□□□□□ -1.69
UBBP1-201ENST00000392399 NUPR1O60356 82 aa4.52□□□□□ -1.69
UBBP1-201ENST00000392399 REG3AQ06141 175 aa4.52□□□□□ -1.69
UBBP1-201ENST00000392399 JOSD1Q15040 202 aaPredicted RBP4.52□□□□□ -1.69
UBBP1-201ENST00000392399 ORMDL2Q53FV1 153 aa4.52□□□□□ -1.69
UBBP1-201ENST00000392399 DGAT2L7PQ6IED9 249 aa4.52□□□□□ -1.69
UBBP1-201ENST00000392399 RNASEKQ6P5S7 137 aaKnown RBP4.52□□□□□ -1.69
UBBP1-201ENST00000392399 ENHOQ6UWT2 76 aa4.52□□□□□ -1.69
UBBP1-201ENST00000392399 FA2HQ7L5A8 372 aa4.52□□□□□ -1.69
UBBP1-201ENST00000392399 LINC00518Q8N0U6 118 aa4.52□□□□□ -1.69
UBBP1-201ENST00000392399 Q8N8P6 123 aa4.52□□□□□ -1.69
UBBP1-201ENST00000392399 OR10D4PQ8NGN7 298 aa4.52□□□□□ -1.69
UBBP1-201ENST00000392399 TIMM21Q9BVV7 248 aa4.52□□□□□ -1.69
UBBP1-201ENST00000392399 C1orf43Q9BWL3 253 aa4.52□□□□□ -1.69
UBBP1-201ENST00000392399 HECTD4Q9Y4D8 3996 aa4.52□□□□□ -1.69
UBBP1-201ENST00000392399 DYNC1H1Q14204 4646 aaKnown RBP4.51□□□□□ -1.69
UBBP1-201ENST00000392399 IGKV2D-24A0A075B6R9 120 aa4.51□□□□□ -1.69
UBBP1-201ENST00000392399 LOC389332A0A1B0GUA5 103 aa4.51□□□□□ -1.69
UBBP1-201ENST00000392399 CCL25O15444 150 aa4.51□□□□□ -1.69
UBBP1-201ENST00000392399 OR5A1Q8NGJ0 315 aa4.51□□□□□ -1.69
UBBP1-201ENST00000392399 PRSS3P2Q8NHM4 247 aa4.51□□□□□ -1.69
UBBP1-201ENST00000392399 CDC42SE2Q9NRR3 84 aa4.51□□□□□ -1.69
UBBP1-201ENST00000392399 A0A087WTM6 91 aa4.5□□□□□ -1.69
UBBP1-201ENST00000392399 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
UBBP1-201ENST00000392399 A0A1B0GVY2 172 aa4.5□□□□□ -1.69
UBBP1-201ENST00000392399 HBDP02042 147 aa4.5□□□□□ -1.69
UBBP1-201ENST00000392399 PDZD11Q5EBL8 140 aa4.5□□□□□ -1.69
UBBP1-201ENST00000392399 ZNF664Q8N3J9 261 aa4.5□□□□□ -1.69
UBBP1-201ENST00000392399 SPANXA1Q9NS26 97 aa4.5□□□□□ -1.69
UBBP1-201ENST00000392399 HSPB8Q9UJY1 196 aa4.5□□□□□ -1.69
UBBP1-201ENST00000392399 UBE2D4Q9Y2X8 147 aa4.5□□□□□ -1.69
UBBP1-201ENST00000392399 PYGO1Q9Y3Y4 419 aa4.5□□□□□ -1.69
UBBP1-201ENST00000392399 PKHD1P08F94 4074 aa4.49□□□□□ -1.69
UBBP1-201ENST00000392399 LRCOL1A6NCL2 159 aa4.49□□□□□ -1.69
UBBP1-201ENST00000392399 LEPROTL1O95214 131 aa4.49□□□□□ -1.69
UBBP1-201ENST00000392399 NPSP0C0P6 89 aa4.49□□□□□ -1.69
UBBP1-201ENST00000392399 IFI27P40305 119 aaPredicted RBP4.49□□□□□ -1.69
UBBP1-201ENST00000392399 MRPS36P82909 103 aaKnown RBP4.49□□□□□ -1.69
UBBP1-201ENST00000392399 C14orf177Q52M58 125 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms