RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 Q8N2B8 174 aa10.11□□□□□ -0.79
CCDC57-203ENST00000392343 TLN2Q9Y4G6 2542 aa10.1□□□□□ -0.79
CCDC57-203ENST00000392343 SPANXA1Q9NS26 97 aa10.1□□□□□ -0.79
CCDC57-203ENST00000392343 ANKRD17O75179 2603 aaKnown RBP10.1□□□□□ -0.79
CCDC57-203ENST00000392343 SETD2Q9BYW2 2564 aaPredicted RBP10.1□□□□□ -0.79
CCDC57-203ENST00000392343 TRAV13-1A0A0B4J241 112 aa10.1□□□□□ -0.79
CCDC57-203ENST00000392343 YAE1D1Q9NRH1 226 aa10.1□□□□□ -0.79
CCDC57-203ENST00000392343 TEX15Q9BXT5 2789 aa10.1□□□□□ -0.79
CCDC57-203ENST00000392343 MYO18BQ8IUG5 2567 aa10.09□□□□□ -0.79
CCDC57-203ENST00000392343 LINC00694P0DN24 101 aa10.09□□□□□ -0.79
CCDC57-203ENST00000392343 LINC00308Q8TCZ7 52 aa10.09□□□□□ -0.79
CCDC57-203ENST00000392343 B4DSR2 109 aa10.09□□□□□ -0.79
CCDC57-203ENST00000392343 Q6Q795 121 aa10.08□□□□□ -0.8
CCDC57-203ENST00000392343 SOSTDC1Q6X4U4 206 aa10.08□□□□□ -0.8
CCDC57-203ENST00000392343 SMIM20Q8N5G0 67 aa10.08□□□□□ -0.8
CCDC57-203ENST00000392343 LINC01600Q96MT4 127 aa10.08□□□□□ -0.8
CCDC57-203ENST00000392343 IGHV3-53P01767 116 aa10.08□□□□□ -0.8
CCDC57-203ENST00000392343 MEIG1Q5JSS6 88 aa10.08□□□□□ -0.8
CCDC57-203ENST00000392343 ZNF415Q09FC8 603 aa10.08□□□□□ -0.8
CCDC57-203ENST00000392343 NF1P21359 2839 aa10.07□□□□□ -0.8
CCDC57-203ENST00000392343 JMJD1CQ15652 2540 aa10.07□□□□□ -0.8
CCDC57-203ENST00000392343 NDUFA1O15239 70 aa10.07□□□□□ -0.8
CCDC57-203ENST00000392343 CIRBPQ14011 172 aaKnown RBP10.07□□□□□ -0.8
CCDC57-203ENST00000392343 KHDC1LQ5JSQ8 128 aa10.07□□□□□ -0.8
CCDC57-203ENST00000392343 XCL2Q9UBD3 114 aa10.07□□□□□ -0.8
CCDC57-203ENST00000392343 PKD1L2Q7Z442 2459 aa10.07□□□□□ -0.8
CCDC57-203ENST00000392343 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
CCDC57-203ENST00000392343 UBE2E2Q96LR5 201 aa10.06□□□□□ -0.8
CCDC57-203ENST00000392343 FAM208BQ5VWN6 2430 aa10.06□□□□□ -0.8
CCDC57-203ENST00000392343 PTPN13Q12923 2485 aa10.06□□□□□ -0.8
CCDC57-203ENST00000392343 PIK3CD-AS1Q5SR53 167 aa10.06□□□□□ -0.8
CCDC57-203ENST00000392343 EDA2RQ9HAV5 297 aa10.06□□□□□ -0.8
CCDC57-203ENST00000392343 EPG5Q9HCE0 2579 aa10.06□□□□□ -0.8
CCDC57-203ENST00000392343 C11orf72Q8NBR9 251 aa10.05□□□□□ -0.8
CCDC57-203ENST00000392343 ACACBO00763 2458 aa10.05□□□□□ -0.8
CCDC57-203ENST00000392343 TMEM89A2RUT3 159 aa10.04□□□□□ -0.8
CCDC57-203ENST00000392343 PRIMA1Q86XR5 153 aa10.04□□□□□ -0.8
CCDC57-203ENST00000392343 SMCR5Q8TEV8 140 aa10.04□□□□□ -0.8
CCDC57-203ENST00000392343 FAM236AA0A1B0GUQ0 79 aa10.04□□□□□ -0.8
CCDC57-203ENST00000392343 FAM236BA0A1B0GV22 79 aa10.04□□□□□ -0.8
CCDC57-203ENST00000392343 TIMM17BO60830 172 aa10.04□□□□□ -0.8
CCDC57-203ENST00000392343 SONP18583 2426 aaKnown RBP10.03□□□□□ -0.8
CCDC57-203ENST00000392343 TIRAPP58753 221 aa10.03□□□□□ -0.8
CCDC57-203ENST00000392343 DAZ2Q13117 558 aaKnown RBP10.03□□□□□ -0.8
CCDC57-203ENST00000392343 DAZ4Q86SG3 579 aaKnown RBP10.03□□□□□ -0.8
CCDC57-203ENST00000392343 Q9HAA7 133 aa10.03□□□□□ -0.8
CCDC57-203ENST00000392343 DAZ3Q9NR90 486 aaKnown RBP10.03□□□□□ -0.8
CCDC57-203ENST00000392343 CACNA1AO00555 2505 aa10.03□□□□□ -0.8
CCDC57-203ENST00000392343 NBPF19A0A087WUL8 3843 aa10.03□□□□□ -0.8
CCDC57-203ENST00000392343 DOPEY1Q5JWR5 2465 aa10.03□□□□□ -0.8
CCDC57-203ENST00000392343 TRGV1A0A0A0MS02 117 aa10.03□□□□□ -0.8
CCDC57-203ENST00000392343 DEFB121Q5J5C9 76 aa10.03□□□□□ -0.8
CCDC57-203ENST00000392343 FAM218AQ96MZ4 157 aa10.03□□□□□ -0.8
CCDC57-203ENST00000392343 ZNF702PQ9H963 129 aa10.03□□□□□ -0.8
CCDC57-203ENST00000392343 MAP6D1Q9H9H5 199 aa10.03□□□□□ -0.8
CCDC57-203ENST00000392343 ABCA12Q86UK0 2595 aa10.02□□□□□ -0.8
CCDC57-203ENST00000392343 SMIM1B2RUZ4 78 aa10.02□□□□□ -0.8
CCDC57-203ENST00000392343 COX7A2LO14548 114 aa10.02□□□□□ -0.8
CCDC57-203ENST00000392343 RNF152Q8N8N0 203 aa10.02□□□□□ -0.8
CCDC57-203ENST00000392343 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
CCDC57-203ENST00000392343 IGLV5-45A0A087WSX0 123 aa10.01□□□□□ -0.81
CCDC57-203ENST00000392343 BAALC-AS2P0C853 105 aa10.01□□□□□ -0.81
CCDC57-203ENST00000392343 HERV-K104P63124 156 aa10.01□□□□□ -0.81
CCDC57-203ENST00000392343 FAM240AA0A1B0GVK7 77 aa10.01□□□□□ -0.81
CCDC57-203ENST00000392343 HERVK_113P63121 156 aa10.01□□□□□ -0.81
CCDC57-203ENST00000392343 NTM-AS1Q6ZSK4 140 aa10□□□□□ -0.81
CCDC57-203ENST00000392343 DYNLRB2Q8TF09 96 aa10□□□□□ -0.81
CCDC57-203ENST00000392343 IGLV5-39A0A0G2JS06 123 aa10□□□□□ -0.81
CCDC57-203ENST00000392343 VPREB3Q9UKI3 123 aa10□□□□□ -0.81
CCDC57-203ENST00000392343 LRRK2Q5S007 2527 aa10□□□□□ -0.81
CCDC57-203ENST00000392343 RS1O15537 224 aa10□□□□□ -0.81
CCDC57-203ENST00000392343 C11orf44Q8N8P7 122 aa10□□□□□ -0.81
CCDC57-203ENST00000392343 PIEZO1Q92508 2521 aa9.99□□□□□ -0.81
CCDC57-203ENST00000392343 MRPL23Q16540 153 aaKnown RBP9.99□□□□□ -0.81
CCDC57-203ENST00000392343 SHISA2Q6UWI4 295 aa9.99□□□□□ -0.81
CCDC57-203ENST00000392343 DNAJC30Q96LL9 226 aa9.99□□□□□ -0.81
CCDC57-203ENST00000392343 NAV2Q8IVL1 2488 aa9.99□□□□□ -0.81
CCDC57-203ENST00000392343 INSP01308 110 aa9.99□□□□□ -0.81
CCDC57-203ENST00000392343 Q96MF0 132 aa9.99□□□□□ -0.81
CCDC57-203ENST00000392343 TRBV7-7A0A0K0K1E9 115 aa9.98□□□□□ -0.81
CCDC57-203ENST00000392343 Q6ZTI0 123 aa9.98□□□□□ -0.81
CCDC57-203ENST00000392343 LINC01356Q8N9X3 169 aa9.98□□□□□ -0.81
CCDC57-203ENST00000392343 TOMM7Q9P0U1 55 aa9.98□□□□□ -0.81
CCDC57-203ENST00000392343 ZNF469Q96JG9 3925 aaPredicted RBP9.98□□□□□ -0.81
CCDC57-203ENST00000392343 BEAN1Q3B7T3 259 aa9.98□□□□□ -0.81
CCDC57-203ENST00000392343 IGSF10Q6WRI0 2623 aa9.98□□□□□ -0.81
CCDC57-203ENST00000392343 C22orf24Q9Y442 160 aa9.97□□□□□ -0.81
CCDC57-203ENST00000392343 GAGE2AQ6NT46 116 aa9.97□□□□□ -0.81
CCDC57-203ENST00000392343 A8MTW9 85 aa9.96□□□□□ -0.81
CCDC57-203ENST00000392343 SETXQ7Z333 2677 aaKnown RBP9.96□□□□□ -0.82
CCDC57-203ENST00000392343 C1orf158Q8N1D5 194 aa9.96□□□□□ -0.82
CCDC57-203ENST00000392343 F5H768 121 aa9.95□□□□□ -0.82
CCDC57-203ENST00000392343 RPL36AP83881 106 aaKnown RBP9.95□□□□□ -0.82
CCDC57-203ENST00000392343 ZFYVE26Q68DK2 2539 aa9.95□□□□□ -0.82
CCDC57-203ENST00000392343 RPL36ALQ969Q0 106 aaKnown RBP9.95□□□□□ -0.82
CCDC57-203ENST00000392343 CDC42SE2Q9NRR3 84 aa9.95□□□□□ -0.82
CCDC57-203ENST00000392343 LOC100131303A0A0U1RQF7 123 aa9.95□□□□□ -0.82
CCDC57-203ENST00000392343 A0A1W2PRX2 142 aa9.95□□□□□ -0.82
CCDC57-203ENST00000392343 DEFB114Q30KQ6 69 aa9.95□□□□□ -0.82
CCDC57-203ENST00000392343 C9orf129Q5T035 196 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms