RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 ARHGAP5Q13017 1502 aa0.26□□□□□ -2.37
TRAJ40-201ENST00000390497 ERCC6L2Q5T890 1561 aa0.26□□□□□ -2.37
TRAJ40-201ENST00000390497 RAPGEF6Q8TEU7 1601 aa0.26□□□□□ -2.37
TRAJ40-201ENST00000390497 ROBO1Q9Y6N7 1651 aa0.26□□□□□ -2.37
TRAJ40-201ENST00000390497 DOCK1Q14185 1865 aa0.26□□□□□ -2.37
TRAJ40-201ENST00000390497 CADP27708 2225 aa0.26□□□□□ -2.37
TRAJ40-201ENST00000390497 ABCA12Q86UK0 2595 aa0.26□□□□□ -2.37
TRAJ40-201ENST00000390497 DOCK2Q92608 1830 aa0.25□□□□□ -2.37
TRAJ40-201ENST00000390497 KDM3BQ7LBC6 1761 aa0.25□□□□□ -2.37
TRAJ40-201ENST00000390497 EHBP1L1Q8N3D4 1523 aa0.25□□□□□ -2.37
TRAJ40-201ENST00000390497 NAP1L6A6NFF2 107 aa0.25□□□□□ -2.37
TRAJ40-201ENST00000390497 CDC42SE2Q9NRR3 84 aa0.25□□□□□ -2.37
TRAJ40-201ENST00000390497 FAIMQ9NVQ4 179 aa0.25□□□□□ -2.37
TRAJ40-201ENST00000390497 POLQO75417 2590 aa0.25□□□□□ -2.37
TRAJ40-201ENST00000390497 TPRP12270 2363 aaKnown RBP0.25□□□□□ -2.37
TRAJ40-201ENST00000390497 NHSL1Q5SYE7 1610 aa0.24□□□□□ -2.37
TRAJ40-201ENST00000390497 USP24Q9UPU5 2620 aa0.24□□□□□ -2.37
TRAJ40-201ENST00000390497 CHKB-CPT1BH3BT56 60 aa0.24□□□□□ -2.37
TRAJ40-201ENST00000390497 COX6CP09669 75 aa0.24□□□□□ -2.37
TRAJ40-201ENST00000390497 GNG11P61952 73 aa0.24□□□□□ -2.37
TRAJ40-201ENST00000390497 Q6JHZ5 121 aa0.24□□□□□ -2.37
TRAJ40-201ENST00000390497 LINC00472Q9H8W2 130 aa0.24□□□□□ -2.37
TRAJ40-201ENST00000390497 LINC00474Q9P2X8 69 aa0.24□□□□□ -2.37
TRAJ40-201ENST00000390497 ANK2Q01484 3957 aa0.24□□□□□ -2.37
TRAJ40-201ENST00000390497 M0R3E3 92 aa0.23□□□□□ -2.37
TRAJ40-201ENST00000390497 Q8IZM0 81 aa0.23□□□□□ -2.37
TRAJ40-201ENST00000390497 NXT2Q9NPJ8 142 aaKnown RBP0.23□□□□□ -2.37
TRAJ40-201ENST00000390497 U3KQA8 63 aa0.23□□□□□ -2.37
TRAJ40-201ENST00000390497 MYO7AQ13402 2215 aa0.23□□□□□ -2.37
TRAJ40-201ENST00000390497 SPHKAPQ2M3C7 1700 aa0.23□□□□□ -2.37
TRAJ40-201ENST00000390497 ARHGEF5Q12774 1597 aa0.23□□□□□ -2.37
TRAJ40-201ENST00000390497 MYH8P13535 1937 aa0.23□□□□□ -2.37
TRAJ40-201ENST00000390497 C20orf202A1L168 122 aa0.22□□□□□ -2.37
TRAJ40-201ENST00000390497 KRTDAPP60985 99 aa0.22□□□□□ -2.37
TRAJ40-201ENST00000390497 UBE2D3P61077 147 aa0.22□□□□□ -2.37
TRAJ40-201ENST00000390497 UBE2D2P62837 147 aa0.22□□□□□ -2.37
TRAJ40-201ENST00000390497 TP53AIP1Q9HCN2 124 aa0.22□□□□□ -2.37
TRAJ40-201ENST00000390497 MRC2Q9UBG0 1479 aa0.22□□□□□ -2.37
TRAJ40-201ENST00000390497 TET3O43151 1660 aa0.21□□□□□ -2.38
TRAJ40-201ENST00000390497 NAV2Q8IVL1 2488 aa0.21□□□□□ -2.38
TRAJ40-201ENST00000390497 BCE1O60756 84 aa0.21□□□□□ -2.38
TRAJ40-201ENST00000390497 CFDP00746 253 aaPredicted RBP0.21□□□□□ -2.38
TRAJ40-201ENST00000390497 Q0VG73 95 aa0.21□□□□□ -2.38
TRAJ40-201ENST00000390497 WFDC2Q14508 124 aa0.21□□□□□ -2.38
TRAJ40-201ENST00000390497 PIGYQ3MUY2 71 aa0.21□□□□□ -2.38
TRAJ40-201ENST00000390497 TCEAL7Q9BRU2 100 aa0.21□□□□□ -2.38
TRAJ40-201ENST00000390497 MANBALQ9NQG1 85 aa0.21□□□□□ -2.38
TRAJ40-201ENST00000390497 HMGXB3Q12766 1538 aa0.21□□□□□ -2.38
TRAJ40-201ENST00000390497 SYNE1Q8NF91 8797 aaKnown RBP0.21□□□□□ -2.38
TRAJ40-201ENST00000390497 LAMC1P11047 1609 aa0.2□□□□□ -2.38
TRAJ40-201ENST00000390497 TOP2BQ02880 1626 aa0.2□□□□□ -2.38
TRAJ40-201ENST00000390497 SBF2Q86WG5 1849 aa0.2□□□□□ -2.38
TRAJ40-201ENST00000390497 WNK3Q9BYP7 1800 aa0.2□□□□□ -2.38
TRAJ40-201ENST00000390497 ZFYVE16Q7Z3T8 1539 aa0.2□□□□□ -2.38
TRAJ40-201ENST00000390497 Q5VSD8 79 aa0.2□□□□□ -2.38
TRAJ40-201ENST00000390497 FAM223AQ8IWN6 122 aa0.2□□□□□ -2.38
TRAJ40-201ENST00000390497 TMEM263Q8WUH6 116 aaKnown RBP0.2□□□□□ -2.38
TRAJ40-201ENST00000390497 PRO1854Q9UHT4 67 aa0.2□□□□□ -2.38
TRAJ40-201ENST00000390497 FAM208BQ5VWN6 2430 aa0.2□□□□□ -2.38
TRAJ40-201ENST00000390497 KDM5AP29375 1690 aaKnown RBP0.2□□□□□ -2.38
TRAJ40-201ENST00000390497 TOPAZ1Q8N9V7 1692 aa0.2□□□□□ -2.38
TRAJ40-201ENST00000390497 ZFYVE26Q68DK2 2539 aa0.2□□□□□ -2.38
TRAJ40-201ENST00000390497 ARHGEF12Q9NZN5 1544 aa0.19□□□□□ -2.38
TRAJ40-201ENST00000390497 MAGI1Q96QZ7 1491 aaPredicted RBP0.19□□□□□ -2.38
TRAJ40-201ENST00000390497 CRYM-AS1A6NIL9 109 aa0.19□□□□□ -2.38
TRAJ40-201ENST00000390497 TMEM262E9PQX1 116 aa0.19□□□□□ -2.38
TRAJ40-201ENST00000390497 IGLC1P0CG04 106 aa0.19□□□□□ -2.38
TRAJ40-201ENST00000390497 TRAPPC2P0DI81 140 aa0.19□□□□□ -2.38
TRAJ40-201ENST00000390497 TRAPPC2BP0DI82 140 aa0.19□□□□□ -2.38
TRAJ40-201ENST00000390497 S100PP25815 95 aa0.19□□□□□ -2.38
TRAJ40-201ENST00000390497 HSD52Q0P140 79 aa0.19□□□□□ -2.38
TRAJ40-201ENST00000390497 ARL2-SNX15V9GYD0 113 aa0.19□□□□□ -2.38
TRAJ40-201ENST00000390497 FAT4Q6V0I7 4981 aa0.19□□□□□ -2.38
TRAJ40-201ENST00000390497 CC2D2AQ9P2K1 1620 aa0.19□□□□□ -2.38
TRAJ40-201ENST00000390497 TRBV6-1A0A0K0K1D8 114 aa0.18□□□□□ -2.38
TRAJ40-201ENST00000390497 I3L2K1 104 aa0.18□□□□□ -2.38
TRAJ40-201ENST00000390497 SAA2P0DJI9 122 aaPredicted RBP0.18□□□□□ -2.38
TRAJ40-201ENST00000390497 SPRR4Q96PI1 79 aa0.18□□□□□ -2.38
TRAJ40-201ENST00000390497 C12orf57Q99622 126 aa0.18□□□□□ -2.38
TRAJ40-201ENST00000390497 CGREF1Q99674 301 aa0.18□□□□□ -2.38
TRAJ40-201ENST00000390497 NSD3Q9BZ95 1437 aa0.18□□□□□ -2.38
TRAJ40-201ENST00000390497 DOCK11Q5JSL3 2073 aa0.18□□□□□ -2.38
TRAJ40-201ENST00000390497 ZNF236Q9UL36 1845 aa0.17□□□□□ -2.38
TRAJ40-201ENST00000390497 PI4KAP42356 2102 aa0.17□□□□□ -2.38
TRAJ40-201ENST00000390497 PAPPAQ13219 1627 aa0.17□□□□□ -2.38
TRAJ40-201ENST00000390497 PRO1933Q9H354 126 aa0.17□□□□□ -2.38
TRAJ40-201ENST00000390497 MUC5BQ9HC84 5762 aaPredicted RBP0.17□□□□□ -2.38
TRAJ40-201ENST00000390497 C10orf142B7Z368 130 aa0.16□□□□□ -2.38
TRAJ40-201ENST00000390497 SNCAP37840 140 aa0.16□□□□□ -2.38
TRAJ40-201ENST00000390497 UBA52P62987 128 aaKnown RBP0.16□□□□□ -2.38
TRAJ40-201ENST00000390497 LRP1Q07954 4544 aaKnown RBP0.16□□□□□ -2.38
TRAJ40-201ENST00000390497 CELSR2Q9HCU4 2923 aa0.16□□□□□ -2.38
TRAJ40-201ENST00000390497 ADGRL2O95490 1459 aa0.16□□□□□ -2.38
TRAJ40-201ENST00000390497 POLA1P09884 1462 aaPredicted RBP0.16□□□□□ -2.38
TRAJ40-201ENST00000390497 PTPRZ1P23471 2315 aaPredicted RBP0.15□□□□□ -2.38
TRAJ40-201ENST00000390497 TULP4Q9NRJ4 1543 aa0.15□□□□□ -2.39
TRAJ40-201ENST00000390497 A0A1B0GWA3 101 aa0.15□□□□□ -2.39
TRAJ40-201ENST00000390497 NDUFC1O43677 76 aa0.15□□□□□ -2.39
TRAJ40-201ENST00000390497 DEFB109BQ30KR1 87 aa0.15□□□□□ -2.39
TRAJ40-201ENST00000390497 C10orf113Q5VZT2 155 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms