RNA–Protein interactions for RNA: ENST00000390489.1

TRAJ48-201, Transcript of T cell receptor alpha joining 48, humanhuman

APPRIS P1 BASIC

Gene TRAJ48, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ48-201ENST00000390489 SAR1AQ9NR31 198 aa-2.43□□□□□ -2.8
TRAJ48-201ENST00000390489 APLNQ9ULZ1 77 aa-2.43□□□□□ -2.8
TRAJ48-201ENST00000390489 KIAA0556O60303 1618 aa-2.43□□□□□ -2.8
TRAJ48-201ENST00000390489 DNAH1Q9P2D7 4330 aa-2.44□□□□□ -2.8
TRAJ48-201ENST00000390489 NWD2Q9ULI1 1742 aa-2.44□□□□□ -2.8
TRAJ48-201ENST00000390489 TRBV7-4A0A0J9YYF1 115 aa-2.44□□□□□ -2.8
TRAJ48-201ENST00000390489 CBLN1P23435 193 aa-2.44□□□□□ -2.8
TRAJ48-201ENST00000390489 TRIQKQ629K1 86 aa-2.44□□□□□ -2.8
TRAJ48-201ENST00000390489 TMEM35BQ8NCS4 154 aa-2.44□□□□□ -2.8
TRAJ48-201ENST00000390489 SPTSSBQ8NFR3 76 aa-2.44□□□□□ -2.8
TRAJ48-201ENST00000390489 USMG5Q96IX5 58 aa-2.44□□□□□ -2.8
TRAJ48-201ENST00000390489 AMELXQ99217 191 aa-2.44□□□□□ -2.8
TRAJ48-201ENST00000390489 MRPL40Q9NQ50 206 aaKnown RBP-2.44□□□□□ -2.8
TRAJ48-201ENST00000390489 TULP4Q9NRJ4 1543 aa-2.44□□□□□ -2.8
TRAJ48-201ENST00000390489 A0A0C4DFX4 3053 aa-2.45□□□□□ -2.8
TRAJ48-201ENST00000390489 MGAM2Q2M2H8 2515 aa-2.45□□□□□ -2.8
TRAJ48-201ENST00000390489 ARHGEF10O15013 1369 aa-2.46□□□□□ -2.8
TRAJ48-201ENST00000390489 SACSQ9NZJ4 4579 aa-2.46□□□□□ -2.8
TRAJ48-201ENST00000390489 CHMP6Q96FZ7 201 aa-2.46□□□□□ -2.8
TRAJ48-201ENST00000390489 MYOM3Q5VTT5 1437 aa-2.46□□□□□ -2.8
TRAJ48-201ENST00000390489 SHANK2Q9UPX8 1470 aa-2.46□□□□□ -2.8
TRAJ48-201ENST00000390489 KIF21AQ7Z4S6 1674 aa-2.47□□□□□ -2.8
TRAJ48-201ENST00000390489 RPS28P62857 69 aaKnown RBP-2.47□□□□□ -2.8
TRAJ48-201ENST00000390489 Q6AWC8 147 aa-2.47□□□□□ -2.8
TRAJ48-201ENST00000390489 SCIMPQ6UWF3 145 aa-2.47□□□□□ -2.8
TRAJ48-201ENST00000390489 CTAGE3PQ8IX95 158 aa-2.47□□□□□ -2.8
TRAJ48-201ENST00000390489 LENEPQ9Y5L5 61 aa-2.47□□□□□ -2.8
TRAJ48-201ENST00000390489 V9GYH0 126 aa-2.47□□□□□ -2.8
TRAJ48-201ENST00000390489 ARHGEF12Q9NZN5 1544 aa-2.47□□□□□ -2.81
TRAJ48-201ENST00000390489 UQCR11O14957 56 aa-2.48□□□□□ -2.81
TRAJ48-201ENST00000390489 APOC3P02656 99 aa-2.48□□□□□ -2.81
TRAJ48-201ENST00000390489 TPPP2P59282 170 aa-2.48□□□□□ -2.81
TRAJ48-201ENST00000390489 SAMD13Q5VXD3 122 aa-2.48□□□□□ -2.81
TRAJ48-201ENST00000390489 MIC13Q5XKP0 118 aa-2.48□□□□□ -2.81
TRAJ48-201ENST00000390489 BAGE2Q86Y30 109 aa-2.48□□□□□ -2.81
TRAJ48-201ENST00000390489 GID8Q9NWU2 228 aa-2.48□□□□□ -2.81
TRAJ48-201ENST00000390489 TRANK1O15050 2925 aa-2.48□□□□□ -2.81
TRAJ48-201ENST00000390489 CMYA5Q8N3K9 4069 aa-2.49□□□□□ -2.81
TRAJ48-201ENST00000390489 CPSF4LA6NMK7 179 aaKnown RBP-2.49□□□□□ -2.81
TRAJ48-201ENST00000390489 SIX6O95475 246 aa-2.49□□□□□ -2.81
TRAJ48-201ENST00000390489 SCTP09683 121 aa-2.49□□□□□ -2.81
TRAJ48-201ENST00000390489 TMEM128Q5BJH2 165 aa-2.49□□□□□ -2.81
TRAJ48-201ENST00000390489 SETBP1Q9Y6X0 1596 aa-2.49□□□□□ -2.81
TRAJ48-201ENST00000390489 PTPN23Q9H3S7 1636 aa-2.5□□□□□ -2.81
TRAJ48-201ENST00000390489 H0YGG7 62 aa-2.5□□□□□ -2.81
TRAJ48-201ENST00000390489 NCS1P62166 190 aa-2.5□□□□□ -2.81
TRAJ48-201ENST00000390489 TCTE3Q8IZS6 198 aa-2.5□□□□□ -2.81
TRAJ48-201ENST00000390489 PCBD2Q9H0N5 130 aa-2.5□□□□□ -2.81
TRAJ48-201ENST00000390489 NAA60Q9H7X0 242 aa-2.5□□□□□ -2.81
TRAJ48-201ENST00000390489 REV3LO60673 3130 aa-2.5□□□□□ -2.81
TRAJ48-201ENST00000390489 ADAMTS12P58397 1594 aa-2.5□□□□□ -2.81
TRAJ48-201ENST00000390489 TMEM2Q9UHN6 1383 aa-2.5□□□□□ -2.81
TRAJ48-201ENST00000390489 PKD1L2Q7Z442 2459 aa-2.51□□□□□ -2.81
TRAJ48-201ENST00000390489 IL5P05113 134 aa-2.51□□□□□ -2.81
TRAJ48-201ENST00000390489 COL4A6Q14031 1691 aa-2.51□□□□□ -2.81
TRAJ48-201ENST00000390489 PAPPA2Q9BXP8 1791 aa-2.51□□□□□ -2.81
TRAJ48-201ENST00000390489 HMGXB3Q12766 1538 aa-2.52□□□□□ -2.81
TRAJ48-201ENST00000390489 RAPGEF6Q8TEU7 1601 aa-2.52□□□□□ -2.81
TRAJ48-201ENST00000390489 WDR87Q6ZQQ6 2873 aa-2.52□□□□□ -2.81
TRAJ48-201ENST00000390489 SPAARA0A1B0GVQ0 90 aa-2.52□□□□□ -2.81
TRAJ48-201ENST00000390489 FMN2Q9NZ56 1722 aa-2.52□□□□□ -2.81
TRAJ48-201ENST00000390489 TROQ12816 1431 aaPredicted RBP-2.52□□□□□ -2.81
TRAJ48-201ENST00000390489 NBEAQ8NFP9 2946 aa-2.52□□□□□ -2.81
TRAJ48-201ENST00000390489 TRAV36DV7A0A075B6V5 113 aa-2.53□□□□□ -2.81
TRAJ48-201ENST00000390489 A0A1B0GX51 115 aa-2.53□□□□□ -2.81
TRAJ48-201ENST00000390489 TMEM238C9JI98 176 aa-2.53□□□□□ -2.81
TRAJ48-201ENST00000390489 F8VRH5 84 aa-2.53□□□□□ -2.81
TRAJ48-201ENST00000390489 ARPC5O15511 151 aa-2.53□□□□□ -2.81
TRAJ48-201ENST00000390489 TNFSF15O95150 251 aa-2.53□□□□□ -2.81
TRAJ48-201ENST00000390489 AQP10Q96PS8 301 aa-2.53□□□□□ -2.81
TRAJ48-201ENST00000390489 NDUFA4L2Q9NRX3 87 aa-2.53□□□□□ -2.81
TRAJ48-201ENST00000390489 IFT140Q96RY7 1462 aa-2.53□□□□□ -2.81
TRAJ48-201ENST00000390489 RIF1Q5UIP0 2472 aaKnown RBP-2.53□□□□□ -2.82
TRAJ48-201ENST00000390489 ZFHX3Q15911 3703 aa-2.54□□□□□ -2.82
TRAJ48-201ENST00000390489 LINC00959A0A1B0GUT2 108 aa-2.54□□□□□ -2.82
TRAJ48-201ENST00000390489 ALX1Q15699 326 aa-2.54□□□□□ -2.82
TRAJ48-201ENST00000390489 C10orf128Q5T292 105 aa-2.54□□□□□ -2.82
TRAJ48-201ENST00000390489 SPTSSAQ969W0 71 aa-2.54□□□□□ -2.82
TRAJ48-201ENST00000390489 SLIT1O75093 1534 aa-2.55□□□□□ -2.82
TRAJ48-201ENST00000390489 NDUFB6O95139 128 aa-2.55□□□□□ -2.82
TRAJ48-201ENST00000390489 CMPK1P30085 196 aa-2.55□□□□□ -2.82
TRAJ48-201ENST00000390489 MMGT1Q8N4V1 131 aa-2.55□□□□□ -2.82
TRAJ48-201ENST00000390489 SEC11CQ9BY50 192 aa-2.55□□□□□ -2.82
TRAJ48-201ENST00000390489 HIGD1AQ9Y241 93 aa-2.55□□□□□ -2.82
TRAJ48-201ENST00000390489 RELNP78509 3460 aa-2.55□□□□□ -2.82
TRAJ48-201ENST00000390489 DYNC1H1Q14204 4646 aaKnown RBP-2.56□□□□□ -2.82
TRAJ48-201ENST00000390489 SSSCA1O60232 199 aa-2.56□□□□□ -2.82
TRAJ48-201ENST00000390489 SNCGO76070 127 aa-2.56□□□□□ -2.82
TRAJ48-201ENST00000390489 B2MP61769 119 aa-2.56□□□□□ -2.82
TRAJ48-201ENST00000390489 TFAMQ00059 246 aaKnown RBP-2.56□□□□□ -2.82
TRAJ48-201ENST00000390489 DEFA5Q01523 94 aa-2.56□□□□□ -2.82
TRAJ48-201ENST00000390489 H1FX-AS1Q4G0G2 97 aa-2.56□□□□□ -2.82
TRAJ48-201ENST00000390489 S100A7L2Q5SY68 101 aa-2.56□□□□□ -2.82
TRAJ48-201ENST00000390489 Q8N8P6 123 aa-2.56□□□□□ -2.82
TRAJ48-201ENST00000390489 PSMG3Q9BT73 122 aaPredicted RBP-2.56□□□□□ -2.82
TRAJ48-201ENST00000390489 DOCK2Q92608 1830 aa-2.56□□□□□ -2.82
TRAJ48-201ENST00000390489 HCG22E2RYF7 251 aa-2.57□□□□□ -2.82
TRAJ48-201ENST00000390489 MT1HP80294 61 aa-2.57□□□□□ -2.82
TRAJ48-201ENST00000390489 TMEM263Q8WUH6 116 aaKnown RBP-2.57□□□□□ -2.82
TRAJ48-201ENST00000390489 SKA2Q8WVK7 121 aaPredicted RBP-2.57□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms