RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 BCL9LQ86UU0 1499 aa0.26□□□□□ -2.37
RNU6-40P-201ENST00000384254 M0R3E3 92 aa0.25□□□□□ -2.37
RNU6-40P-201ENST00000384254 TNFP01375 233 aa0.25□□□□□ -2.37
RNU6-40P-201ENST00000384254 C9orf153Q5TBE3 101 aa0.25□□□□□ -2.37
RNU6-40P-201ENST00000384254 CHD9Q3L8U1 2897 aa0.25□□□□□ -2.37
RNU6-40P-201ENST00000384254 AMELXQ99217 191 aa0.24□□□□□ -2.37
RNU6-40P-201ENST00000384254 SSPOA2VEC9 5147 aa0.24□□□□□ -2.37
RNU6-40P-201ENST00000384254 FAM208BQ5VWN6 2430 aa0.24□□□□□ -2.37
RNU6-40P-201ENST00000384254 ERCC6L2Q5T890 1561 aa0.23□□□□□ -2.37
RNU6-40P-201ENST00000384254 A2ML1A8K2U0 1454 aa0.23□□□□□ -2.37
RNU6-40P-201ENST00000384254 PTPN13Q12923 2485 aa0.23□□□□□ -2.37
RNU6-40P-201ENST00000384254 ANK2Q01484 3957 aa0.23□□□□□ -2.37
RNU6-40P-201ENST00000384254 HRNRQ86YZ3 2850 aaPredicted RBP0.23□□□□□ -2.37
RNU6-40P-201ENST00000384254 DLEU1O43261 78 aa0.23□□□□□ -2.37
RNU6-40P-201ENST00000384254 NALCNQ8IZF0 1738 aa0.23□□□□□ -2.37
RNU6-40P-201ENST00000384254 SONP18583 2426 aaKnown RBP0.23□□□□□ -2.37
RNU6-40P-201ENST00000384254 RYR2Q92736 4967 aa0.23□□□□□ -2.37
RNU6-40P-201ENST00000384254 NSD1Q96L73 2696 aaPredicted RBP0.22□□□□□ -2.37
RNU6-40P-201ENST00000384254 ZNF236Q9UL36 1845 aa0.22□□□□□ -2.37
RNU6-40P-201ENST00000384254 TEP1Q99973 2627 aaKnown RBP0.22□□□□□ -2.37
RNU6-40P-201ENST00000384254 HIVEP3Q5T1R4 2406 aa0.22□□□□□ -2.37
RNU6-40P-201ENST00000384254 A0A1B0GV90 55 aa0.22□□□□□ -2.37
RNU6-40P-201ENST00000384254 OOSP1A8MZH6 123 aa0.22□□□□□ -2.37
RNU6-40P-201ENST00000384254 BIVM-ERCC5R4GMW8 1640 aa0.22□□□□□ -2.37
RNU6-40P-201ENST00000384254 TCHHQ07283 1943 aa0.22□□□□□ -2.37
RNU6-40P-201ENST00000384254 UBE2L5PA0A1B0GUS4 154 aa0.21□□□□□ -2.38
RNU6-40P-201ENST00000384254 IGLC7A0M8Q6 106 aa0.21□□□□□ -2.38
RNU6-40P-201ENST00000384254 FAM24AA6NFZ4 105 aa0.21□□□□□ -2.38
RNU6-40P-201ENST00000384254 HMGN4O00479 90 aa0.21□□□□□ -2.38
RNU6-40P-201ENST00000384254 BCE1O60756 84 aa0.21□□□□□ -2.38
RNU6-40P-201ENST00000384254 UBE2L3P68036 154 aaKnown RBP0.21□□□□□ -2.38
RNU6-40P-201ENST00000384254 Q8IZM0 81 aa0.21□□□□□ -2.38
RNU6-40P-201ENST00000384254 SBF2Q86WG5 1849 aa0.21□□□□□ -2.38
RNU6-40P-201ENST00000384254 KIF21AQ7Z4S6 1674 aa0.21□□□□□ -2.38
RNU6-40P-201ENST00000384254 LRP6O75581 1613 aa0.2□□□□□ -2.38
RNU6-40P-201ENST00000384254 NHSL1Q5SYE7 1610 aa0.2□□□□□ -2.38
RNU6-40P-201ENST00000384254 PSME4Q14997 1843 aa0.2□□□□□ -2.38
RNU6-40P-201ENST00000384254 Q6JHZ5 121 aa0.2□□□□□ -2.38
RNU6-40P-201ENST00000384254 LINC01558Q9Y6Z2 57 aa0.2□□□□□ -2.38
RNU6-40P-201ENST00000384254 VWFP04275 2813 aa0.2□□□□□ -2.38
RNU6-40P-201ENST00000384254 RYR1P21817 5038 aa0.2□□□□□ -2.38
RNU6-40P-201ENST00000384254 LRP1Q07954 4544 aaKnown RBP0.19□□□□□ -2.38
RNU6-40P-201ENST00000384254 WFDC2Q14508 124 aa0.19□□□□□ -2.38
RNU6-40P-201ENST00000384254 UQCR10Q9UDW1 63 aa0.19□□□□□ -2.38
RNU6-40P-201ENST00000384254 ABCA2Q9BZC7 2435 aa0.18□□□□□ -2.38
RNU6-40P-201ENST00000384254 QRICH2Q9H0J4 1663 aa0.18□□□□□ -2.38
RNU6-40P-201ENST00000384254 SPTBN2O15020 2390 aa0.18□□□□□ -2.38
RNU6-40P-201ENST00000384254 GNG4P50150 75 aa0.18□□□□□ -2.38
RNU6-40P-201ENST00000384254 ATP5EP56381 51 aaPredicted RBP0.18□□□□□ -2.38
RNU6-40P-201ENST00000384254 SVBPQ8N300 66 aa0.18□□□□□ -2.38
RNU6-40P-201ENST00000384254 COL6A5A8TX70 2615 aa0.18□□□□□ -2.38
RNU6-40P-201ENST00000384254 MYOM2P54296 1465 aa0.17□□□□□ -2.38
RNU6-40P-201ENST00000384254 C10orf142B7Z368 130 aa0.17□□□□□ -2.38
RNU6-40P-201ENST00000384254 CHKB-CPT1BH3BT56 60 aa0.17□□□□□ -2.38
RNU6-40P-201ENST00000384254 SFT2D2O95562 160 aa0.17□□□□□ -2.38
RNU6-40P-201ENST00000384254 DCDP81605 110 aaKnown RBP0.17□□□□□ -2.38
RNU6-40P-201ENST00000384254 SMG6Q86US8 1419 aaKnown RBP0.17□□□□□ -2.38
RNU6-40P-201ENST00000384254 TP53AIP1Q9HCN2 124 aa0.17□□□□□ -2.38
RNU6-40P-201ENST00000384254 IER3IP1Q9Y5U9 82 aa0.17□□□□□ -2.38
RNU6-40P-201ENST00000384254 STAB2Q8WWQ8 2551 aa0.17□□□□□ -2.38
RNU6-40P-201ENST00000384254 CREBBPQ92793 2442 aa0.17□□□□□ -2.38
RNU6-40P-201ENST00000384254 LINC00474Q9P2X8 69 aa0.16□□□□□ -2.38
RNU6-40P-201ENST00000384254 GNG8Q9UK08 70 aa0.16□□□□□ -2.38
RNU6-40P-201ENST00000384254 CUL7Q14999 1698 aa0.16□□□□□ -2.38
RNU6-40P-201ENST00000384254 RIMS1Q86UR5 1692 aaKnown RBP0.16□□□□□ -2.38
RNU6-40P-201ENST00000384254 BSNQ9UPA5 3926 aa0.16□□□□□ -2.38
RNU6-40P-201ENST00000384254 DMBT1Q9UGM3 2413 aaPredicted RBP0.16□□□□□ -2.38
RNU6-40P-201ENST00000384254 SHANK2Q9UPX8 1470 aa0.16□□□□□ -2.38
RNU6-40P-201ENST00000384254 HIVEP1P15822 2718 aa0.15□□□□□ -2.38
RNU6-40P-201ENST00000384254 RNF213Q63HN8 5207 aa0.15□□□□□ -2.38
RNU6-40P-201ENST00000384254 ROBO1Q9Y6N7 1651 aa0.15□□□□□ -2.39
RNU6-40P-201ENST00000384254 HERC1Q15751 4861 aa0.15□□□□□ -2.39
RNU6-40P-201ENST00000384254 F6UZH7 168 aa0.15□□□□□ -2.39
RNU6-40P-201ENST00000384254 GNG11P61952 73 aa0.15□□□□□ -2.39
RNU6-40P-201ENST00000384254 PPP3R1P63098 170 aa0.15□□□□□ -2.39
RNU6-40P-201ENST00000384254 TMEM203Q969S6 136 aa0.15□□□□□ -2.39
RNU6-40P-201ENST00000384254 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
RNU6-40P-201ENST00000384254 LINC00472Q9H8W2 130 aa0.15□□□□□ -2.39
RNU6-40P-201ENST00000384254 FAIMQ9NVQ4 179 aa0.15□□□□□ -2.39
RNU6-40P-201ENST00000384254 RIF1Q5UIP0 2472 aaKnown RBP0.15□□□□□ -2.39
RNU6-40P-201ENST00000384254 FLNAP21333 2647 aaKnown RBP0.14□□□□□ -2.39
RNU6-40P-201ENST00000384254 CORTO00230 105 aa0.14□□□□□ -2.39
RNU6-40P-201ENST00000384254 MRPS10P82664 201 aaKnown RBP0.14□□□□□ -2.39
RNU6-40P-201ENST00000384254 DEFB109BQ30KR1 87 aa0.14□□□□□ -2.39
RNU6-40P-201ENST00000384254 DPH3P1Q9H4G8 78 aa0.14□□□□□ -2.39
RNU6-40P-201ENST00000384254 EIF4G3O43432 1585 aaKnown RBP0.14□□□□□ -2.39
RNU6-40P-201ENST00000384254 ZNF292O60281 2723 aa0.14□□□□□ -2.39
RNU6-40P-201ENST00000384254 PLCE1Q9P212 2302 aa0.13□□□□□ -2.39
RNU6-40P-201ENST00000384254 FASNP49327 2511 aaKnown RBP0.13□□□□□ -2.39
RNU6-40P-201ENST00000384254 EPPK1P58107 5090 aaKnown RBP0.13□□□□□ -2.39
RNU6-40P-201ENST00000384254 MGPP08493 103 aa0.13□□□□□ -2.39
RNU6-40P-201ENST00000384254 S100A1P23297 94 aa0.13□□□□□ -2.39
RNU6-40P-201ENST00000384254 NXT2Q9NPJ8 142 aaKnown RBP0.13□□□□□ -2.39
RNU6-40P-201ENST00000384254 HYDINQ4G0P3 5121 aa0.13□□□□□ -2.39
RNU6-40P-201ENST00000384254 ABCA13Q86UQ4 5058 aa0.13□□□□□ -2.39
RNU6-40P-201ENST00000384254 COL7A1Q02388 2944 aa0.12□□□□□ -2.39
RNU6-40P-201ENST00000384254 ACANP16112 2415 aa0.12□□□□□ -2.39
RNU6-40P-201ENST00000384254 RYR3Q15413 4870 aa0.12□□□□□ -2.39
RNU6-40P-201ENST00000384254 FXYD6-FXYD2A0A087WZ82 144 aa0.12□□□□□ -2.39
RNU6-40P-201ENST00000384254 WHAMMP3Q1A5X7 153 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms