RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 NACAE9PAV3 2078 aa8.36□□□□□ -1.07
SMAD9-202ENST00000379826 TRBV30A0A0K0K1B3 111 aa8.36□□□□□ -1.07
SMAD9-202ENST00000379826 RPL32P62910 135 aaKnown RBP8.36□□□□□ -1.07
SMAD9-202ENST00000379826 PSMB8P28062 276 aa8.36□□□□□ -1.07
SMAD9-202ENST00000379826 MAP6D1Q9H9H5 199 aa8.36□□□□□ -1.07
SMAD9-202ENST00000379826 ODF3Q96PU9 254 aa8.36□□□□□ -1.07
SMAD9-202ENST00000379826 H7C423 109 aa8.36□□□□□ -1.07
SMAD9-202ENST00000379826 AVPP01185 164 aa8.36□□□□□ -1.07
SMAD9-202ENST00000379826 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
SMAD9-202ENST00000379826 C5orf38Q86SI9 138 aa8.36□□□□□ -1.07
SMAD9-202ENST00000379826 TRAV13-2A0A0B4J235 113 aa8.35□□□□□ -1.07
SMAD9-202ENST00000379826 H3BT86 120 aa8.35□□□□□ -1.07
SMAD9-202ENST00000379826 DSPP15924 2871 aaKnown RBP8.35□□□□□ -1.07
SMAD9-202ENST00000379826 INAFM2P0DMQ5 153 aa8.35□□□□□ -1.07
SMAD9-202ENST00000379826 XCL1P47992 114 aa8.35□□□□□ -1.07
SMAD9-202ENST00000379826 S100A7L2Q5SY68 101 aa8.34□□□□□ -1.07
SMAD9-202ENST00000379826 UBE2D4Q9Y2X8 147 aa8.34□□□□□ -1.07
SMAD9-202ENST00000379826 AGRNO00468 2067 aa8.34□□□□□ -1.07
SMAD9-202ENST00000379826 PIK3CD-AS1Q5SR53 167 aa8.34□□□□□ -1.07
SMAD9-202ENST00000379826 KIF25-AS1Q9Y6Z4 181 aa8.34□□□□□ -1.07
SMAD9-202ENST00000379826 MYO18BQ8IUG5 2567 aa8.34□□□□□ -1.07
SMAD9-202ENST00000379826 POM121L12Q8N7R1 296 aa8.34□□□□□ -1.07
SMAD9-202ENST00000379826 IGKV3D-7A0A0C4DH55 119 aa8.33□□□□□ -1.08
SMAD9-202ENST00000379826 COX7B2Q8TF08 81 aa8.33□□□□□ -1.08
SMAD9-202ENST00000379826 OVOL2Q9BRP0 275 aa8.33□□□□□ -1.08
SMAD9-202ENST00000379826 SND1-IT1Q9HBX3 110 aa8.33□□□□□ -1.08
SMAD9-202ENST00000379826 ZNF462Q96JM2 2506 aa8.33□□□□□ -1.08
SMAD9-202ENST00000379826 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.33□□□□□ -1.085e-8■■■■■ 38.8
SMAD9-202ENST00000379826 NDUFA7O95182 113 aa8.33□□□□□ -1.08
SMAD9-202ENST00000379826 LINC00315P59091 139 aa8.33□□□□□ -1.08
SMAD9-202ENST00000379826 Q6ZTI0 123 aa8.33□□□□□ -1.08
SMAD9-202ENST00000379826 LINC00308Q8TCZ7 52 aa8.33□□□□□ -1.08
SMAD9-202ENST00000379826 SPANXDQ9BXN6 97 aa8.32□□□□□ -1.08
SMAD9-202ENST00000379826 SPANXCQ9NY87 97 aa8.32□□□□□ -1.08
SMAD9-202ENST00000379826 ZFHX4Q86UP3 3567 aa8.32□□□□□ -1.08
SMAD9-202ENST00000379826 SS18Q15532 418 aa8.32□□□□□ -1.08
SMAD9-202ENST00000379826 Q6ZSN1 163 aa8.32□□□□□ -1.08
SMAD9-202ENST00000379826 MIR7-3HGQ8N6C7 128 aa8.32□□□□□ -1.08
SMAD9-202ENST00000379826 ZNF575Q86XF7 245 aa8.32□□□□□ -1.08
SMAD9-202ENST00000379826 SONP18583 2426 aaKnown RBP8.32□□□□□ -1.08
SMAD9-202ENST00000379826 DAZ2Q13117 558 aaKnown RBP8.32□□□□□ -1.08
SMAD9-202ENST00000379826 DAZ4Q86SG3 579 aaKnown RBP8.32□□□□□ -1.08
SMAD9-202ENST00000379826 DAZ3Q9NR90 486 aaKnown RBP8.32□□□□□ -1.08
SMAD9-202ENST00000379826 HERV-K104P63124 156 aa8.31□□□□□ -1.08
SMAD9-202ENST00000379826 COX6A2Q02221 97 aa8.31□□□□□ -1.08
SMAD9-202ENST00000379826 LAMTOR3Q9UHA4 124 aa8.31□□□□□ -1.08
SMAD9-202ENST00000379826 FAM19A4Q96LR4 140 aa8.31□□□□□ -1.08
SMAD9-202ENST00000379826 PYGO1Q9Y3Y4 419 aa8.31□□□□□ -1.08
SMAD9-202ENST00000379826 NDUFA1O15239 70 aa8.3□□□□□ -1.08
SMAD9-202ENST00000379826 MRPS36P82909 103 aaKnown RBP8.3□□□□□ -1.08
SMAD9-202ENST00000379826 COX7A2LO14548 114 aa8.3□□□□□ -1.08
SMAD9-202ENST00000379826 C11orf45Q8TAV5 145 aa8.3□□□□□ -1.08
SMAD9-202ENST00000379826 C4orf3Q8WVX3 66 aa8.3□□□□□ -1.08
SMAD9-202ENST00000379826 C14orf132Q9NPU4 83 aa8.3□□□□□ -1.08
SMAD9-202ENST00000379826 ACYP1P07311 99 aa8.3□□□□□ -1.08
SMAD9-202ENST00000379826 ATP5G1P05496 136 aa8.3□□□□□ -1.08
SMAD9-202ENST00000379826 SPART-AS1P0CW21 52 aa8.3□□□□□ -1.08
SMAD9-202ENST00000379826 CHCHD7Q9BUK0 85 aa8.29□□□□□ -1.08
SMAD9-202ENST00000379826 Q6YL49 198 aa8.29□□□□□ -1.08
SMAD9-202ENST00000379826 LST1O00453 97 aa8.29□□□□□ -1.08
SMAD9-202ENST00000379826 FHL3Q13643 280 aa8.29□□□□□ -1.08
SMAD9-202ENST00000379826 TMEM89A2RUT3 159 aa8.28□□□□□ -1.08
SMAD9-202ENST00000379826 LECT2O14960 151 aa8.28□□□□□ -1.08
SMAD9-202ENST00000379826 RNF152Q8N8N0 203 aa8.28□□□□□ -1.08
SMAD9-202ENST00000379826 FASNP49327 2511 aaKnown RBP8.28□□□□□ -1.08
SMAD9-202ENST00000379826 DEFB135Q30KP9 77 aa8.28□□□□□ -1.08
SMAD9-202ENST00000379826 ZNF702PQ9H963 129 aa8.28□□□□□ -1.08
SMAD9-202ENST00000379826 RBMY1FQ15415 496 aaKnown RBP8.28□□□□□ -1.08
SMAD9-202ENST00000379826 SLPIP03973 132 aa8.27□□□□□ -1.08
SMAD9-202ENST00000379826 IGLV10-54A0A075B6I4 117 aa8.27□□□□□ -1.09
SMAD9-202ENST00000379826 LOC100131303A0A0U1RQF7 123 aa8.27□□□□□ -1.09
SMAD9-202ENST00000379826 OXLD1Q5BKU9 147 aa8.27□□□□□ -1.09
SMAD9-202ENST00000379826 SDIM1Q6ZPB5 146 aa8.27□□□□□ -1.09
SMAD9-202ENST00000379826 ESM1Q9NQ30 184 aa8.27□□□□□ -1.09
SMAD9-202ENST00000379826 CCDC168Q8NDH2 2452 aa8.26□□□□□ -1.09
SMAD9-202ENST00000379826 ASPMQ8IZT6 3477 aa8.26□□□□□ -1.09
SMAD9-202ENST00000379826 Q9UF83 564 aa8.26□□□□□ -1.09
SMAD9-202ENST00000379826 PRRC2AP48634 2157 aaKnown RBP8.26□□□□□ -1.09
SMAD9-202ENST00000379826 TRACP01848 142 aa8.26□□□□□ -1.09
SMAD9-202ENST00000379826 MRPL23Q16540 153 aaKnown RBP8.26□□□□□ -1.09
SMAD9-202ENST00000379826 DEFB114Q30KQ6 69 aa8.26□□□□□ -1.09
SMAD9-202ENST00000379826 C16orf74Q96GX8 76 aa8.26□□□□□ -1.09
SMAD9-202ENST00000379826 ORMDL1Q9P0S3 153 aa8.26□□□□□ -1.09
SMAD9-202ENST00000379826 AMELXQ99217 191 aa8.25□□□□□ -1.09
SMAD9-202ENST00000379826 LINC00694P0DN24 101 aa8.25□□□□□ -1.09
SMAD9-202ENST00000379826 NCR3O14931 201 aa8.25□□□□□ -1.09
SMAD9-202ENST00000379826 BOD1L1Q8NFC6 3051 aa8.25□□□□□ -1.09
SMAD9-202ENST00000379826 TIRAPP58753 221 aa8.24□□□□□ -1.09
SMAD9-202ENST00000379826 FAM110AQ9BQ89 295 aa8.24□□□□□ -1.09
SMAD9-202ENST00000379826 GYPEP15421 78 aa8.24□□□□□ -1.09
SMAD9-202ENST00000379826 MGAQ8IWI9 3026 aa8.24□□□□□ -1.09
SMAD9-202ENST00000379826 A0A1B0GX51 115 aa8.24□□□□□ -1.09
SMAD9-202ENST00000379826 TMEM126AQ9H061 195 aa8.24□□□□□ -1.09
SMAD9-202ENST00000379826 HIVEP3Q5T1R4 2406 aa8.24□□□□□ -1.09
SMAD9-202ENST00000379826 WFDC10AQ9H1F0 79 aa8.24□□□□□ -1.09
SMAD9-202ENST00000379826 ANGP03950 147 aaKnown RBP8.23□□□□□ -1.09
SMAD9-202ENST00000379826 TLN1Q9Y490 2541 aaKnown RBP8.23□□□□□ -1.09
SMAD9-202ENST00000379826 SPATA3Q8NHX4 192 aa8.23□□□□□ -1.09
SMAD9-202ENST00000379826 CSPG4Q6UVK1 2322 aa8.23□□□□□ -1.09
SMAD9-202ENST00000379826 NAV2Q8IVL1 2488 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms