RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 HBBP68871 147 aa9.89□□□□□ -0.83
RAB4B-202ENST00000378307 CLLU1Q5K131 121 aa9.89□□□□□ -0.83
RAB4B-202ENST00000378307 SDIM1Q6ZPB5 146 aa9.89□□□□□ -0.83
RAB4B-202ENST00000378307 MRPL52Q86TS9 123 aaKnown RBP9.89□□□□□ -0.83
RAB4B-202ENST00000378307 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.89□□□□□ -0.83
RAB4B-202ENST00000378307 TRBV24-1A0A075B6N3 115 aa9.88□□□□□ -0.83
RAB4B-202ENST00000378307 LINC00959A0A1B0GUT2 108 aa9.88□□□□□ -0.83
RAB4B-202ENST00000378307 LINC00862A6NCI5 91 aa9.88□□□□□ -0.83
RAB4B-202ENST00000378307 D6R8Y8 96 aa9.88□□□□□ -0.83
RAB4B-202ENST00000378307 FOXI1Q12951 378 aa9.88□□□□□ -0.83
RAB4B-202ENST00000378307 BTF3L4Q96K17 158 aa9.88□□□□□ -0.83
RAB4B-202ENST00000378307 HERC1Q15751 4861 aa9.87□□□□□ -0.83
RAB4B-202ENST00000378307 TNFRSF6BO95407 300 aa9.87□□□□□ -0.83
RAB4B-202ENST00000378307 PPP1R17O96001 155 aa9.87□□□□□ -0.83
RAB4B-202ENST00000378307 FCER1GP30273 86 aa9.87□□□□□ -0.83
RAB4B-202ENST00000378307 HIGD2BQ4VC39 106 aa9.87□□□□□ -0.83
RAB4B-202ENST00000378307 ZNF664Q8N3J9 261 aa9.87□□□□□ -0.83
RAB4B-202ENST00000378307 TMEM101Q96IK0 257 aa9.87□□□□□ -0.83
RAB4B-202ENST00000378307 PKHD1L1Q86WI1 4243 aa9.87□□□□□ -0.83
RAB4B-202ENST00000378307 NPYP01303 97 aa9.86□□□□□ -0.83
RAB4B-202ENST00000378307 XCL1P47992 114 aa9.86□□□□□ -0.83
RAB4B-202ENST00000378307 KRTAP10-4P60372 401 aaPredicted RBP9.86□□□□□ -0.83
RAB4B-202ENST00000378307 RNASE13Q5GAN3 156 aaKnown RBP9.86□□□□□ -0.83
RAB4B-202ENST00000378307 C20orf78Q9BR46 151 aa9.86□□□□□ -0.83
RAB4B-202ENST00000378307 UBE2D4Q9Y2X8 147 aa9.86□□□□□ -0.83
RAB4B-202ENST00000378307 PPP1R2P9O14990 202 aa9.85□□□□□ -0.83
RAB4B-202ENST00000378307 CCL25O15444 150 aa9.85□□□□□ -0.83
RAB4B-202ENST00000378307 ADCYAP1P18509 176 aa9.85□□□□□ -0.83
RAB4B-202ENST00000378307 RPL32P62910 135 aaKnown RBP9.85□□□□□ -0.83
RAB4B-202ENST00000378307 PNRC1Q12796 327 aaPredicted RBP9.85□□□□□ -0.83
RAB4B-202ENST00000378307 KIR2DL4Q99706 377 aa9.85□□□□□ -0.83
RAB4B-202ENST00000378307 LRP1Q07954 4544 aaKnown RBP9.85□□□□□ -0.83
RAB4B-202ENST00000378307 F8W036 122 aa9.84□□□□□ -0.83
RAB4B-202ENST00000378307 RPL39P62891 51 aaKnown RBP9.84□□□□□ -0.83
RAB4B-202ENST00000378307 ATP5L2Q7Z4Y8 100 aa9.84□□□□□ -0.83
RAB4B-202ENST00000378307 FAM104AQ969W3 186 aa9.84□□□□□ -0.83
RAB4B-202ENST00000378307 ANAPC16Q96DE5 110 aa9.84□□□□□ -0.83
RAB4B-202ENST00000378307 SMIM2Q9BVW6 85 aa9.84□□□□□ -0.83
RAB4B-202ENST00000378307 S100A8P05109 93 aa9.83□□□□□ -0.84
RAB4B-202ENST00000378307 LINC00526Q96FQ7 95 aa9.83□□□□□ -0.84
RAB4B-202ENST00000378307 AP5S1Q9NUS5 200 aa9.83□□□□□ -0.84
RAB4B-202ENST00000378307 CSDC2Q9Y534 153 aaKnown RBP9.83□□□□□ -0.84
RAB4B-202ENST00000378307 FAT3Q8TDW7 4589 aa9.83□□□□□ -0.84
RAB4B-202ENST00000378307 GVQW2A0A096LPI5 108 aaPredicted RBP9.82□□□□□ -0.84
RAB4B-202ENST00000378307 TCAPO15273 167 aa9.82□□□□□ -0.84
RAB4B-202ENST00000378307 MT-ND4LP03901 98 aa9.82□□□□□ -0.84
RAB4B-202ENST00000378307 CHTF8P0CG12 524 aa9.82□□□□□ -0.84
RAB4B-202ENST00000378307 CFAP161Q6P656 301 aa9.82□□□□□ -0.84
RAB4B-202ENST00000378307 Q6ZUT4 128 aa9.82□□□□□ -0.84
RAB4B-202ENST00000378307 PLA2G1BP04054 148 aaKnown RBP9.81□□□□□ -0.84
RAB4B-202ENST00000378307 CIRBPQ14011 172 aaKnown RBP9.81□□□□□ -0.84
RAB4B-202ENST00000378307 SS18Q15532 418 aa9.81□□□□□ -0.84
RAB4B-202ENST00000378307 CD164L2Q6UWJ8 174 aa9.81□□□□□ -0.84
RAB4B-202ENST00000378307 TMEM136Q6ZRR5 245 aa9.81□□□□□ -0.84
RAB4B-202ENST00000378307 OPRPNQ99935 248 aaPredicted RBP9.81□□□□□ -0.84
RAB4B-202ENST00000378307 IGHV3-64A0A075B6Q5 118 aa9.8□□□□□ -0.84
RAB4B-202ENST00000378307 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.8□□□□□ -0.84
RAB4B-202ENST00000378307 TMEM218A2RU14 115 aa9.8□□□□□ -0.84
RAB4B-202ENST00000378307 PHOX2AO14813 284 aa9.8□□□□□ -0.84
RAB4B-202ENST00000378307 PPBPP02775 128 aa9.8□□□□□ -0.84
RAB4B-202ENST00000378307 ORMDL3Q8N138 153 aa9.8□□□□□ -0.84
RAB4B-202ENST00000378307 PRELID3AQ96N28 172 aa9.8□□□□□ -0.84
RAB4B-202ENST00000378307 TIMM21Q9BVV7 248 aa9.8□□□□□ -0.84
RAB4B-202ENST00000378307 COX6A2Q02221 97 aa9.79□□□□□ -0.84
RAB4B-202ENST00000378307 PRSS3P2Q8NHM4 247 aa9.79□□□□□ -0.84
RAB4B-202ENST00000378307 TRAV13-1A0A0B4J241 112 aa9.78□□□□□ -0.84
RAB4B-202ENST00000378307 UQCC3Q6UW78 93 aa9.78□□□□□ -0.84
RAB4B-202ENST00000378307 IGHV1-58A0A0C4DH39 117 aa9.77□□□□□ -0.85
RAB4B-202ENST00000378307 LOC389332A0A1B0GUA5 103 aa9.77□□□□□ -0.85
RAB4B-202ENST00000378307 PRSS47A8MTI9 375 aa9.77□□□□□ -0.85
RAB4B-202ENST00000378307 C1orf196B1AJZ1 125 aa9.77□□□□□ -0.85
RAB4B-202ENST00000378307 SPACA4Q8TDM5 124 aa9.77□□□□□ -0.85
RAB4B-202ENST00000378307 TMEM18Q96B42 140 aa9.77□□□□□ -0.85
RAB4B-202ENST00000378307 DMBT1Q9UGM3 2413 aaPredicted RBP9.77□□□□□ -0.85
RAB4B-202ENST00000378307 A0A087WYN8 130 aa9.76□□□□□ -0.85
RAB4B-202ENST00000378307 C5orf38Q86SI9 138 aa9.76□□□□□ -0.85
RAB4B-202ENST00000378307 HNRNPA3P51991 378 aaKnown RBP9.75□□□□□ -0.85
RAB4B-202ENST00000378307 SMAGPQ0VAQ4 97 aa9.75□□□□□ -0.85
RAB4B-202ENST00000378307 COMMD7Q86VX2 200 aa9.74□□□□□ -0.85
RAB4B-202ENST00000378307 DPH3Q96FX2 82 aa9.74□□□□□ -0.85
RAB4B-202ENST00000378307 IMMP2LQ96T52 175 aa9.74□□□□□ -0.85
RAB4B-202ENST00000378307 SPANXA1Q9NS26 97 aa9.74□□□□□ -0.85
RAB4B-202ENST00000378307 A0A096LNI7 61 aa9.73□□□□□ -0.85
RAB4B-202ENST00000378307 IGKV2-24A0A0C4DH68 120 aa9.73□□□□□ -0.85
RAB4B-202ENST00000378307 COX7A2LO14548 114 aa9.73□□□□□ -0.85
RAB4B-202ENST00000378307 RPL37AP61513 92 aaKnown RBP9.73□□□□□ -0.85
RAB4B-202ENST00000378307 MRPS36P82909 103 aaKnown RBP9.73□□□□□ -0.85
RAB4B-202ENST00000378307 SEC11CQ9BY50 192 aa9.73□□□□□ -0.85
RAB4B-202ENST00000378307 IGLV4-69A0A075B6H9 119 aa9.72□□□□□ -0.85
RAB4B-202ENST00000378307 ZNF561-AS1K7EIQ3 104 aa9.72□□□□□ -0.85
RAB4B-202ENST00000378307 RAB5AP20339 215 aa9.72□□□□□ -0.85
RAB4B-202ENST00000378307 MALP21145 153 aa9.72□□□□□ -0.85
RAB4B-202ENST00000378307 CARD19Q96LW7 228 aa9.72□□□□□ -0.85
RAB4B-202ENST00000378307 CTDSP1Q9GZU7 261 aa9.72□□□□□ -0.85
RAB4B-202ENST00000378307 MAP1LC3AQ9H492 121 aa9.72□□□□□ -0.85
RAB4B-202ENST00000378307 LAMTOR2Q9Y2Q5 125 aa9.72□□□□□ -0.85
RAB4B-202ENST00000378307 IGLV4-3A0A075B6K6 122 aa9.71□□□□□ -0.86
RAB4B-202ENST00000378307 SYCNQ0VAF6 134 aa9.71□□□□□ -0.86
RAB4B-202ENST00000378307 MAJINQ3KP22 176 aa9.71□□□□□ -0.86
RAB4B-202ENST00000378307 KIAA1644Q3SXP7 199 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms