RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 NEXN-AS1Q8NBZ9 246 aa5.87□□□□□ -1.47
CKAP2-203ENST00000378037 TMEM141Q96I45 108 aa5.87□□□□□ -1.47
CKAP2-203ENST00000378037 TMEM243Q9BU79 118 aa5.87□□□□□ -1.47
CKAP2-203ENST00000378037 TRBV7-3A0A075B6L6 115 aa5.87□□□□□ -1.47
CKAP2-203ENST00000378037 IGHV4-4A0A075B6R2 117 aa5.87□□□□□ -1.47
CKAP2-203ENST00000378037 TMEM89A2RUT3 159 aa5.87□□□□□ -1.47
CKAP2-203ENST00000378037 SCRT2Q9NQ03 307 aa5.87□□□□□ -1.47
CKAP2-203ENST00000378037 ETDBQ3ZM63 59 aa5.87□□□□□ -1.47
CKAP2-203ENST00000378037 PAPPA-AS1Q5QFB9 102 aa5.87□□□□□ -1.47
CKAP2-203ENST00000378037 LGALS9O00182 355 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 KRTAP10-3P60369 221 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 HSD52Q0P140 79 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 G3V4G9 280 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 K7EQD1 137 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 C20orf203Q8NBC4 194 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 C20orf78Q9BR46 151 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 CST9LQ9H4G1 147 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 TRBV7-9A0A0J9YWB2 115 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 MYMXA0A1B0GTQ4 84 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 CYSRT1A8MQ03 144 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 RS1O15537 224 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 IGHV4-30-4P0DP06 118 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 SH2D6Q7Z4S9 175 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 COX11Q9Y6N1 276 aa5.86□□□□□ -1.47
CKAP2-203ENST00000378037 C9orf66Q5T8R8 295 aa5.85□□□□□ -1.47
CKAP2-203ENST00000378037 RHODO00212 210 aa5.85□□□□□ -1.47
CKAP2-203ENST00000378037 CRPP02741 224 aa5.85□□□□□ -1.47
CKAP2-203ENST00000378037 CKS1BP61024 79 aa5.85□□□□□ -1.47
CKAP2-203ENST00000378037 ZFAND6Q6FIF0 208 aa5.85□□□□□ -1.47
CKAP2-203ENST00000378037 IGHV4-28A0A0C4DH34 117 aa5.85□□□□□ -1.47
CKAP2-203ENST00000378037 KRTAP1-1Q07627 177 aa5.85□□□□□ -1.47
CKAP2-203ENST00000378037 ATP6V0E2Q8NHE4 81 aa5.85□□□□□ -1.47
CKAP2-203ENST00000378037 TMEM263Q8WUH6 116 aaKnown RBP5.85□□□□□ -1.47
CKAP2-203ENST00000378037 PTH2Q96A98 100 aa5.85□□□□□ -1.47
CKAP2-203ENST00000378037 CIRBPQ14011 172 aaKnown RBP5.84□□□□□ -1.47
CKAP2-203ENST00000378037 HIGD2BQ4VC39 106 aa5.84□□□□□ -1.47
CKAP2-203ENST00000378037 LINC00269Q8N2A0 174 aa5.84□□□□□ -1.47
CKAP2-203ENST00000378037 DNAJC30Q96LL9 226 aa5.84□□□□□ -1.47
CKAP2-203ENST00000378037 IGLL5B9A064 214 aa5.84□□□□□ -1.47
CKAP2-203ENST00000378037 H3BRM9 83 aa5.84□□□□□ -1.47
CKAP2-203ENST00000378037 C2orf82Q6UX34 121 aa5.84□□□□□ -1.47
CKAP2-203ENST00000378037 TRBV6-1A0A0K0K1D8 114 aa5.84□□□□□ -1.48
CKAP2-203ENST00000378037 TOMM6Q96B49 74 aa5.84□□□□□ -1.48
CKAP2-203ENST00000378037 IGLV2-18A0A075B6J9 118 aa5.83□□□□□ -1.48
CKAP2-203ENST00000378037 IGLV4-3A0A075B6K6 122 aa5.83□□□□□ -1.48
CKAP2-203ENST00000378037 IGKV2D-24A0A075B6R9 120 aa5.83□□□□□ -1.48
CKAP2-203ENST00000378037 A4D1N5 150 aa5.83□□□□□ -1.48
CKAP2-203ENST00000378037 TSHBP01222 138 aa5.83□□□□□ -1.48
CKAP2-203ENST00000378037 NANOS2P60321 138 aaKnown RBP5.83□□□□□ -1.48
CKAP2-203ENST00000378037 PIK3CD-AS1Q5SR53 167 aa5.83□□□□□ -1.48
CKAP2-203ENST00000378037 POM121L12Q8N7R1 296 aa5.83□□□□□ -1.48
CKAP2-203ENST00000378037 KRTAP24-1Q3LI83 254 aa5.83□□□□□ -1.48
CKAP2-203ENST00000378037 MRPS16Q9Y3D3 137 aaKnown RBP5.83□□□□□ -1.48
CKAP2-203ENST00000378037 IGLV1-51P01701 117 aa5.82□□□□□ -1.48
CKAP2-203ENST00000378037 RHOHQ15669 191 aa5.82□□□□□ -1.48
CKAP2-203ENST00000378037 MUSTN1Q8IVN3 82 aa5.82□□□□□ -1.48
CKAP2-203ENST00000378037 APOC4P55056 127 aa5.82□□□□□ -1.48
CKAP2-203ENST00000378037 DAZ2Q13117 558 aaKnown RBP5.82□□□□□ -1.48
CKAP2-203ENST00000378037 DAZ4Q86SG3 579 aaKnown RBP5.82□□□□□ -1.48
CKAP2-203ENST00000378037 DAZ3Q9NR90 486 aaKnown RBP5.82□□□□□ -1.48
CKAP2-203ENST00000378037 TSPEAR-AS2P59090 65 aa5.82□□□□□ -1.48
CKAP2-203ENST00000378037 GAGE2EQ4V326 116 aa5.82□□□□□ -1.48
CKAP2-203ENST00000378037 NDUFA11Q86Y39 141 aa5.82□□□□□ -1.48
CKAP2-203ENST00000378037 TMEM86BQ8N661 226 aa5.82□□□□□ -1.48
CKAP2-203ENST00000378037 C16orf74Q96GX8 76 aa5.82□□□□□ -1.48
CKAP2-203ENST00000378037 GAGE2DQ9UEU5 116 aa5.82□□□□□ -1.48
CKAP2-203ENST00000378037 CELA1Q9UNI1 258 aa5.82□□□□□ -1.48
CKAP2-203ENST00000378037 IGLV4-60A0A075B6I1 120 aa5.81□□□□□ -1.48
CKAP2-203ENST00000378037 C9JAW5 83 aa5.81□□□□□ -1.48
CKAP2-203ENST00000378037 TAX1BP3O14907 124 aa5.81□□□□□ -1.48
CKAP2-203ENST00000378037 MORN3Q6PF18 240 aaPredicted RBP5.81□□□□□ -1.48
CKAP2-203ENST00000378037 C2orf91Q6ZV80 131 aa5.81□□□□□ -1.48
CKAP2-203ENST00000378037 C9orf85Q96MD7 179 aa5.81□□□□□ -1.48
CKAP2-203ENST00000378037 EDA2RQ9HAV5 297 aa5.81□□□□□ -1.48
CKAP2-203ENST00000378037 SRRM2Q9UQ35 2752 aaKnown RBP5.81□□□□□ -1.48
CKAP2-203ENST00000378037 POLR2KP53803 58 aaKnown RBP5.81□□□□□ -1.48
CKAP2-203ENST00000378037 C12orf74Q32Q52 190 aa5.81□□□□□ -1.48
CKAP2-203ENST00000378037 UBE2DNLQ8IWF7 75 aa5.81□□□□□ -1.48
CKAP2-203ENST00000378037 CEND1Q8N111 149 aa5.81□□□□□ -1.48
CKAP2-203ENST00000378037 ERG28Q9UKR5 140 aa5.81□□□□□ -1.48
CKAP2-203ENST00000378037 FSHBP01225 129 aa5.8□□□□□ -1.48
CKAP2-203ENST00000378037 ATP5G1P05496 136 aa5.8□□□□□ -1.48
CKAP2-203ENST00000378037 UBE2V1Q13404 147 aa5.8□□□□□ -1.48
CKAP2-203ENST00000378037 ZNF575Q86XF7 245 aa5.8□□□□□ -1.48
CKAP2-203ENST00000378037 SPART-AS1P0CW21 52 aa5.8□□□□□ -1.48
CKAP2-203ENST00000378037 COX6A2Q02221 97 aa5.8□□□□□ -1.48
CKAP2-203ENST00000378037 KRTAP21-3Q3LHN1 58 aa5.8□□□□□ -1.48
CKAP2-203ENST00000378037 C9orf116Q5BN46 136 aaPredicted RBP5.8□□□□□ -1.48
CKAP2-203ENST00000378037 BOD1L2Q8IYS8 172 aa5.8□□□□□ -1.48
CKAP2-203ENST00000378037 U3KQK5 164 aa5.8□□□□□ -1.48
CKAP2-203ENST00000378037 ZNF22P17026 224 aaPredicted RBP5.8□□□□□ -1.48
CKAP2-203ENST00000378037 LINC00315P59091 139 aa5.8□□□□□ -1.48
CKAP2-203ENST00000378037 WFDC2Q14508 124 aa5.8□□□□□ -1.48
CKAP2-203ENST00000378037 XAGE1AQ9HD64 81 aa5.8□□□□□ -1.48
CKAP2-203ENST00000378037 A0A0J9YWU9 116 aa5.79□□□□□ -1.48
CKAP2-203ENST00000378037 OCIAD2Q56VL3 154 aa5.79□□□□□ -1.48
CKAP2-203ENST00000378037 Q6ZTC4 211 aa5.79□□□□□ -1.48
CKAP2-203ENST00000378037 M0R2N4 97 aa5.79□□□□□ -1.48
CKAP2-203ENST00000378037 SEC11AP67812 179 aa5.79□□□□□ -1.48
CKAP2-203ENST00000378037 CLEC2BQ92478 149 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms