RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 FAT2Q9NYQ8 4349 aa8.81□□□□□ -1
CKAP2-202ENST00000378034 LOC389332A0A1B0GUA5 103 aa8.81□□□□□ -1
CKAP2-202ENST00000378034 LRCOL1A6NCL2 159 aa8.81□□□□□ -1
CKAP2-202ENST00000378034 FABP9Q0Z7S8 132 aa8.81□□□□□ -1
CKAP2-202ENST00000378034 LINC00518Q8N0U6 118 aa8.81□□□□□ -1
CKAP2-202ENST00000378034 DGAT2L7PQ6IED9 249 aa8.8□□□□□ -1
CKAP2-202ENST00000378034 ALKBH7Q9BT30 221 aaPredicted RBP8.8□□□□□ -1
CKAP2-202ENST00000378034 TRAPPC1Q9Y5R8 145 aa8.8□□□□□ -1
CKAP2-202ENST00000378034 CLPSL2Q6UWE3 100 aa8.79□□□□□ -1
CKAP2-202ENST00000378034 UBE2D4Q9Y2X8 147 aa8.79□□□□□ -1
CKAP2-202ENST00000378034 ORMDL2Q53FV1 153 aa8.79□□□□□ -1
CKAP2-202ENST00000378034 CDC42SE2Q9NRR3 84 aa8.79□□□□□ -1
CKAP2-202ENST00000378034 ZNF664Q8N3J9 261 aa8.78□□□□□ -1
CKAP2-202ENST00000378034 SPANXA1Q9NS26 97 aa8.78□□□□□ -1
CKAP2-202ENST00000378034 PGPEP1Q9NXJ5 209 aa8.78□□□□□ -1
CKAP2-202ENST00000378034 G0S2P27469 103 aa8.77□□□□□ -1
CKAP2-202ENST00000378034 SPATA12Q7Z6I5 190 aa8.77□□□□□ -1
CKAP2-202ENST00000378034 MAPKAPK5-AS1Q8N8E1 139 aa8.77□□□□□ -1
CKAP2-202ENST00000378034 HECTD4Q9Y4D8 3996 aa8.77□□□□□ -1.01
CKAP2-202ENST00000378034 C5orf52A6NGY3 159 aa8.77□□□□□ -1.01
CKAP2-202ENST00000378034 IFI27P40305 119 aaPredicted RBP8.77□□□□□ -1.01
CKAP2-202ENST00000378034 CDPF1Q6NVV7 123 aa8.77□□□□□ -1.01
CKAP2-202ENST00000378034 KRTAP26-1Q6PEX3 210 aa8.77□□□□□ -1.01
CKAP2-202ENST00000378034 AKR1D1P51857 326 aa8.76□□□□□ -1.01
CKAP2-202ENST00000378034 RPL39P62891 51 aaKnown RBP8.76□□□□□ -1.01
CKAP2-202ENST00000378034 Q8N814 137 aa8.76□□□□□ -1.01
CKAP2-202ENST00000378034 PRSS3P2Q8NHM4 247 aa8.76□□□□□ -1.01
CKAP2-202ENST00000378034 PKD1P98161 4303 aa8.76□□□□□ -1.01
CKAP2-202ENST00000378034 CCL25O15444 150 aa8.75□□□□□ -1.01
CKAP2-202ENST00000378034 S100A6P06703 90 aa8.75□□□□□ -1.01
CKAP2-202ENST00000378034 SNRPEP62304 92 aaKnown RBP8.75□□□□□ -1.01
CKAP2-202ENST00000378034 NTN5Q8WTR8 489 aaPredicted RBP8.75□□□□□ -1.01
CKAP2-202ENST00000378034 BAALCQ8WXS3 180 aa8.75□□□□□ -1.01
CKAP2-202ENST00000378034 PYGO1Q9Y3Y4 419 aa8.75□□□□□ -1.01
CKAP2-202ENST00000378034 EPPK1P58107 5090 aaKnown RBP8.75□□□□□ -1.01
CKAP2-202ENST00000378034 IGLV10-54A0A075B6I4 117 aa8.75□□□□□ -1.01
CKAP2-202ENST00000378034 LINC01546A6NGU7 62 aa8.75□□□□□ -1.01
CKAP2-202ENST00000378034 MRPS36P82909 103 aaKnown RBP8.75□□□□□ -1.01
CKAP2-202ENST00000378034 C14orf177Q52M58 125 aa8.75□□□□□ -1.01
CKAP2-202ENST00000378034 CYSLTR1Q9Y271 337 aa8.75□□□□□ -1.01
CKAP2-202ENST00000378034 IGKV3OR2-268A0A0C4DH90 116 aa8.74□□□□□ -1.01
CKAP2-202ENST00000378034 LINC00959A0A1B0GUT2 108 aa8.74□□□□□ -1.01
CKAP2-202ENST00000378034 KRTAP10-2P60368 255 aa8.74□□□□□ -1.01
CKAP2-202ENST00000378034 NPSP0C0P6 89 aa8.73□□□□□ -1.01
CKAP2-202ENST00000378034 SS18Q15532 418 aa8.73□□□□□ -1.01
CKAP2-202ENST00000378034 C2orf66Q6UXQ4 117 aa8.73□□□□□ -1.01
CKAP2-202ENST00000378034 LINC01549A6NIU2 74 aa8.73□□□□□ -1.01
CKAP2-202ENST00000378034 C16orf90A8MZG2 172 aa8.73□□□□□ -1.01
CKAP2-202ENST00000378034 WFDC2Q14508 124 aa8.73□□□□□ -1.01
CKAP2-202ENST00000378034 CHCHD10Q8WYQ3 142 aaPredicted RBP8.73□□□□□ -1.01
CKAP2-202ENST00000378034 LECT2O14960 151 aa8.72□□□□□ -1.01
CKAP2-202ENST00000378034 Q6ZUT4 128 aa8.72□□□□□ -1.01
CKAP2-202ENST00000378034 FA2HQ7L5A8 372 aa8.72□□□□□ -1.01
CKAP2-202ENST00000378034 C12orf57Q99622 126 aa8.72□□□□□ -1.01
CKAP2-202ENST00000378034 GAGE12HA6NDE8 117 aa8.72□□□□□ -1.01
CKAP2-202ENST00000378034 C18orf32Q8TCD1 76 aa8.72□□□□□ -1.01
CKAP2-202ENST00000378034 USP17L23D6RBM5 183 aa8.71□□□□□ -1.02
CKAP2-202ENST00000378034 FAM104AQ969W3 186 aa8.71□□□□□ -1.02
CKAP2-202ENST00000378034 SMIM6P0DI80 62 aa8.7□□□□□ -1.02
CKAP2-202ENST00000378034 CFAP161Q6P656 301 aa8.7□□□□□ -1.02
CKAP2-202ENST00000378034 TOMM6Q96B49 74 aa8.7□□□□□ -1.02
CKAP2-202ENST00000378034 TMEM141Q96I45 108 aa8.7□□□□□ -1.02
CKAP2-202ENST00000378034 IGLV4-3A0A075B6K6 122 aa8.7□□□□□ -1.02
CKAP2-202ENST00000378034 IGLV5-52A0A0A0MRZ9 124 aa8.7□□□□□ -1.02
CKAP2-202ENST00000378034 RNASE13Q5GAN3 156 aaKnown RBP8.7□□□□□ -1.02
CKAP2-202ENST00000378034 CD164L2Q6UWJ8 174 aa8.7□□□□□ -1.02
CKAP2-202ENST00000378034 DNAH11Q96DT5 4516 aa8.69□□□□□ -1.02
CKAP2-202ENST00000378034 IGIPA6NJ69 53 aa8.69□□□□□ -1.02
CKAP2-202ENST00000378034 LINC00614P0C842 121 aa8.69□□□□□ -1.02
CKAP2-202ENST00000378034 XCL1P47992 114 aa8.69□□□□□ -1.02
CKAP2-202ENST00000378034 FOXI1Q12951 378 aa8.69□□□□□ -1.02
CKAP2-202ENST00000378034 PAPPA-AS1Q5QFB9 102 aa8.69□□□□□ -1.02
CKAP2-202ENST00000378034 TIMM17AQ99595 171 aa8.69□□□□□ -1.02
CKAP2-202ENST00000378034 OPRPNQ99935 248 aaPredicted RBP8.69□□□□□ -1.02
CKAP2-202ENST00000378034 AP5S1Q9NUS5 200 aa8.69□□□□□ -1.02
CKAP2-202ENST00000378034 TRAV13-1A0A0B4J241 112 aa8.68□□□□□ -1.02
CKAP2-202ENST00000378034 Q6ZN92 141 aa8.68□□□□□ -1.02
CKAP2-202ENST00000378034 TEX43Q6ZNM6 134 aa8.68□□□□□ -1.02
CKAP2-202ENST00000378034 ERASQ7Z444 233 aa8.68□□□□□ -1.02
CKAP2-202ENST00000378034 IFITM10A6NMD0 228 aa8.67□□□□□ -1.02
CKAP2-202ENST00000378034 TRGC2P03986 189 aa8.67□□□□□ -1.02
CKAP2-202ENST00000378034 GCSHP23434 173 aa8.67□□□□□ -1.02
CKAP2-202ENST00000378034 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-202ENST00000378034 HIST1H2BKO60814 126 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 HIST1H2BJP06899 126 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 PRSS1P07477 247 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 HIST1H2BOP23527 126 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 HIST1H2BBP33778 126 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 HIST1H2BDP58876 126 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 HIST1H2BCP62807 126 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 HIST2H2BEQ16778 126 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-202ENST00000378034 HIST1H2BHQ93079 126 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 URB1-AS1Q96HZ7 61 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 SCGB3A1Q96QR1 104 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 AMELXQ99217 191 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 HIST1H2BNQ99877 126 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 HIST1H2BMQ99879 126 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 C2orf88Q9BSF0 95 aa8.66□□□□□ -1.02
CKAP2-202ENST00000378034 VCX2Q9H322 139 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms