RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 DGAT2L7PQ6IED9 249 aa12.97□□□□□ -0.33
GNE-201ENST00000377902 TEX15Q9BXT5 2789 aa12.97□□□□□ -0.33
GNE-201ENST00000377902 H3BT86 120 aa12.96□□□□□ -0.33
GNE-201ENST00000377902 IGHV3-53P01767 116 aa12.96□□□□□ -0.33
GNE-201ENST00000377902 Q8N2B8 174 aa12.96□□□□□ -0.33
GNE-201ENST00000377902 PRORYQ9H606 182 aa12.96□□□□□ -0.34
GNE-201ENST00000377902 NDUFA1O15239 70 aa12.95□□□□□ -0.34
GNE-201ENST00000377902 LINC00308Q8TCZ7 52 aa12.95□□□□□ -0.34
GNE-201ENST00000377902 YAE1D1Q9NRH1 226 aa12.95□□□□□ -0.34
GNE-201ENST00000377902 VPREB3Q9UKI3 123 aa12.95□□□□□ -0.34
GNE-201ENST00000377902 NIPBLQ6KC79 2804 aaeCLIP12.95□□□□□ -0.34
GNE-201ENST00000377902 SOSTDC1Q6X4U4 206 aa12.95□□□□□ -0.34
GNE-201ENST00000377902 WNK1Q9H4A3 2382 aa12.95□□□□□ -0.34
GNE-201ENST00000377902 LINC00242Q5T6M2 205 aa12.94□□□□□ -0.34
GNE-201ENST00000377902 MAP6D1Q9H9H5 199 aa12.94□□□□□ -0.34
GNE-201ENST00000377902 XCL2Q9UBD3 114 aa12.94□□□□□ -0.34
GNE-201ENST00000377902 MYO18BQ8IUG5 2567 aa12.94□□□□□ -0.34
GNE-201ENST00000377902 TRAV13-1A0A0B4J241 112 aa12.94□□□□□ -0.34
GNE-201ENST00000377902 LINC01356Q8N9X3 169 aa12.94□□□□□ -0.34
GNE-201ENST00000377902 ZNF469Q96JG9 3925 aaPredicted RBP12.94□□□□□ -0.34
GNE-201ENST00000377902 NBPF19A0A087WUL8 3843 aa12.93□□□□□ -0.34
GNE-201ENST00000377902 KHDC1LQ5JSQ8 128 aa12.93□□□□□ -0.34
GNE-201ENST00000377902 GAGE12JA6NER3 117 aa12.92□□□□□ -0.34
GNE-201ENST00000377902 GAGE7O76087 117 aa12.92□□□□□ -0.34
GNE-201ENST00000377902 GAGE12FP0CL80 117 aa12.92□□□□□ -0.34
GNE-201ENST00000377902 GAGE12GP0CL81 117 aa12.92□□□□□ -0.34
GNE-201ENST00000377902 GAGE12IP0CL82 117 aa12.92□□□□□ -0.34
GNE-201ENST00000377902 GAGE4Q13068 117 aa12.92□□□□□ -0.34
GNE-201ENST00000377902 IGLV5-45A0A087WSX0 123 aa12.92□□□□□ -0.34
GNE-201ENST00000377902 A8MTW9 85 aa12.92□□□□□ -0.34
GNE-201ENST00000377902 TIMM17BO60830 172 aa12.92□□□□□ -0.34
GNE-201ENST00000377902 TIRAPP58753 221 aa12.92□□□□□ -0.34
GNE-201ENST00000377902 Q6Q795 121 aa12.91□□□□□ -0.34
GNE-201ENST00000377902 CIRBPQ14011 172 aaKnown RBP12.9□□□□□ -0.34
GNE-201ENST00000377902 CHCHD5Q9BSY4 110 aa12.9□□□□□ -0.34
GNE-201ENST00000377902 IGSF10Q6WRI0 2623 aa12.9□□□□□ -0.34
GNE-201ENST00000377902 RS1O15537 224 aa12.9□□□□□ -0.34
GNE-201ENST00000377902 BEAN1Q3B7T3 259 aa12.89□□□□□ -0.35
GNE-201ENST00000377902 Q6YL49 198 aa12.89□□□□□ -0.35
GNE-201ENST00000377902 NF1P21359 2839 aa12.89□□□□□ -0.35
GNE-201ENST00000377902 IGLV5-39A0A0G2JS06 123 aa12.89□□□□□ -0.35
GNE-201ENST00000377902 SMIM1B2RUZ4 78 aa12.89□□□□□ -0.35
GNE-201ENST00000377902 NTM-AS1Q6ZSK4 140 aa12.89□□□□□ -0.35
GNE-201ENST00000377902 DNAJC30Q96LL9 226 aa12.89□□□□□ -0.35
GNE-201ENST00000377902 TLN2Q9Y4G6 2542 aa12.89□□□□□ -0.35
GNE-201ENST00000377902 A0A096LNT2 108 aa12.88□□□□□ -0.35
GNE-201ENST00000377902 TRGV1A0A0A0MS02 117 aa12.88□□□□□ -0.35
GNE-201ENST00000377902 DEFB121Q5J5C9 76 aa12.88□□□□□ -0.35
GNE-201ENST00000377902 PIK3CD-AS1Q5SR53 167 aa12.88□□□□□ -0.35
GNE-201ENST00000377902 FAM208BQ5VWN6 2430 aa12.88□□□□□ -0.35
GNE-201ENST00000377902 DYNLRB2Q8TF09 96 aa12.88□□□□□ -0.35
GNE-201ENST00000377902 PIEZO1Q92508 2521 aa12.88□□□□□ -0.35
GNE-201ENST00000377902 ACACBO00763 2458 aa12.88□□□□□ -0.35
GNE-201ENST00000377902 INSP01308 110 aa12.87□□□□□ -0.35
GNE-201ENST00000377902 MEIG1Q5JSS6 88 aa12.87□□□□□ -0.35
GNE-201ENST00000377902 PRIMA1Q86XR5 153 aa12.87□□□□□ -0.35
GNE-201ENST00000377902 C3orf56Q8N813 242 aa12.87□□□□□ -0.35
GNE-201ENST00000377902 EPG5Q9HCE0 2579 aa12.87□□□□□ -0.35
GNE-201ENST00000377902 HERVK_113P63121 156 aa12.87□□□□□ -0.35
GNE-201ENST00000377902 SVIPQ8NHG7 77 aa12.86□□□□□ -0.35
GNE-201ENST00000377902 FAM218AQ96MZ4 157 aa12.86□□□□□ -0.35
GNE-201ENST00000377902 COX7A2LO14548 114 aa12.85□□□□□ -0.35
GNE-201ENST00000377902 DEFB114Q30KQ6 69 aa12.85□□□□□ -0.35
GNE-201ENST00000377902 Q6ZTI0 123 aa12.85□□□□□ -0.35
GNE-201ENST00000377902 C1orf158Q8N1D5 194 aa12.85□□□□□ -0.35
GNE-201ENST00000377902 SMCR5Q8TEV8 140 aa12.85□□□□□ -0.35
GNE-201ENST00000377902 Q96MF0 132 aa12.85□□□□□ -0.35
GNE-201ENST00000377902 ABCA12Q86UK0 2595 aa12.85□□□□□ -0.35
GNE-201ENST00000377902 CACNA1AO00555 2505 aa12.85□□□□□ -0.35
GNE-201ENST00000377902 FAM240AA0A1B0GVK7 77 aa12.84□□□□□ -0.35
GNE-201ENST00000377902 JMJD1CQ15652 2540 aa12.84□□□□□ -0.35
GNE-201ENST00000377902 SHISA2Q6UWI4 295 aa12.84□□□□□ -0.35
GNE-201ENST00000377902 C11orf44Q8N8P7 122 aa12.84□□□□□ -0.35
GNE-201ENST00000377902 PEMTQ9UBM1 199 aa12.83□□□□□ -0.35
GNE-201ENST00000377902 PTPN13Q12923 2485 aa12.83□□□□□ -0.36
GNE-201ENST00000377902 SETD2Q9BYW2 2564 aaPredicted RBP12.83□□□□□ -0.36
GNE-201ENST00000377902 DAZ2Q13117 558 aaKnown RBP12.83□□□□□ -0.36
GNE-201ENST00000377902 ODF3L2Q3SX64 289 aa12.83□□□□□ -0.36
GNE-201ENST00000377902 DAZ4Q86SG3 579 aaKnown RBP12.83□□□□□ -0.36
GNE-201ENST00000377902 DAZ3Q9NR90 486 aaKnown RBP12.83□□□□□ -0.36
GNE-201ENST00000377902 F5H768 121 aa12.82□□□□□ -0.36
GNE-201ENST00000377902 SONP18583 2426 aaKnown RBP12.82□□□□□ -0.36
GNE-201ENST00000377902 Q9HAA7 133 aa12.81□□□□□ -0.36
GNE-201ENST00000377902 C22orf24Q9Y442 160 aa12.81□□□□□ -0.36
GNE-201ENST00000377902 DSCR9P59020 149 aa12.81□□□□□ -0.36
GNE-201ENST00000377902 CDC42SE2Q9NRR3 84 aa12.81□□□□□ -0.36
GNE-201ENST00000377902 BAALC-AS2P0C853 105 aa12.8□□□□□ -0.36
GNE-201ENST00000377902 IGKV3OR2-268A0A0C4DH90 116 aa12.8□□□□□ -0.36
GNE-201ENST00000377902 J3QLI3 93 aa12.8□□□□□ -0.36
GNE-201ENST00000377902 MRPL23Q16540 153 aaKnown RBP12.8□□□□□ -0.36
GNE-201ENST00000377902 RPL36AP83881 106 aaKnown RBP12.79□□□□□ -0.36
GNE-201ENST00000377902 RPL36ALQ969Q0 106 aaKnown RBP12.79□□□□□ -0.36
GNE-201ENST00000377902 LOC100131303A0A0U1RQF7 123 aa12.79□□□□□ -0.36
GNE-201ENST00000377902 A0A1W2PRX2 142 aa12.79□□□□□ -0.36
GNE-201ENST00000377902 K7EQD1 137 aa12.79□□□□□ -0.36
GNE-201ENST00000377902 STHQ8IWL8 128 aa12.79□□□□□ -0.36
GNE-201ENST00000377902 C4orf3Q8WVX3 66 aa12.79□□□□□ -0.36
GNE-201ENST00000377902 LRRK2Q5S007 2527 aa12.79□□□□□ -0.36
GNE-201ENST00000377902 SETXQ7Z333 2677 aaKnown RBP12.79□□□□□ -0.36
GNE-201ENST00000377902 TRBV7-7A0A0K0K1E9 115 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms