RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 RNF185Q96GF1 192 aa12.23□□□□□ -0.45
CBWD3-204ENST00000377349 TRBV6-5A0A0K0K1A5 114 aa12.22□□□□□ -0.45
CBWD3-204ENST00000377349 CHTF8P0CG12 524 aa12.22□□□□□ -0.45
CBWD3-204ENST00000377349 RPL23P62829 140 aaKnown RBP12.22□□□□□ -0.45
CBWD3-204ENST00000377349 CIRBPQ14011 172 aaKnown RBP12.22□□□□□ -0.45
CBWD3-204ENST00000377349 C15orf56Q8N910 161 aa12.22□□□□□ -0.45
CBWD3-204ENST00000377349 FAM231BA6NCW3 169 aa12.21□□□□□ -0.45
CBWD3-204ENST00000377349 NDUFS6O75380 124 aaKnown RBP12.21□□□□□ -0.45
CBWD3-204ENST00000377349 ZNF25P17030 456 aaPredicted RBP12.21□□□□□ -0.45
CBWD3-204ENST00000377349 FCER1GP30273 86 aa12.21□□□□□ -0.45
CBWD3-204ENST00000377349 FAM74A3Q4VXF1 159 aa12.21□□□□□ -0.45
CBWD3-204ENST00000377349 NAT8BQ9UHF3 227 aa12.21□□□□□ -0.45
CBWD3-204ENST00000377349 C9JQL5 133 aa12.2□□□□□ -0.46
CBWD3-204ENST00000377349 SLPIP03973 132 aa12.2□□□□□ -0.46
CBWD3-204ENST00000377349 SRSF3P84103 164 aaKnown RBP12.2□□□□□ -0.46
CBWD3-204ENST00000377349 NAT8Q9UHE5 227 aa12.2□□□□□ -0.46
CBWD3-204ENST00000377349 CAMPP49913 170 aa12.2□□□□□ -0.46
CBWD3-204ENST00000377349 PEA15Q15121 130 aa12.2□□□□□ -0.46
CBWD3-204ENST00000377349 RNF213Q63HN8 5207 aa12.19□□□□□ -0.46
CBWD3-204ENST00000377349 C7orf77A4D0Y5 90 aa12.19□□□□□ -0.46
CBWD3-204ENST00000377349 CCL25O15444 150 aa12.19□□□□□ -0.46
CBWD3-204ENST00000377349 IGKV2-24A0A0C4DH68 120 aa12.17□□□□□ -0.46
CBWD3-204ENST00000377349 ESDP10768 282 aa12.17□□□□□ -0.46
CBWD3-204ENST00000377349 FOXI1Q12951 378 aa12.17□□□□□ -0.46
CBWD3-204ENST00000377349 TRBV27A0A0K0K1C4 114 aa12.16□□□□□ -0.46
CBWD3-204ENST00000377349 LINC00959A0A1B0GUT2 108 aa12.16□□□□□ -0.46
CBWD3-204ENST00000377349 VCYO14598 125 aa12.16□□□□□ -0.46
CBWD3-204ENST00000377349 POLR2KP53803 58 aaKnown RBP12.16□□□□□ -0.46
CBWD3-204ENST00000377349 COX6A2Q02221 97 aa12.16□□□□□ -0.46
CBWD3-204ENST00000377349 SS18Q15532 418 aa12.16□□□□□ -0.46
CBWD3-204ENST00000377349 SUMO2P61956 95 aaKnown RBP12.15□□□□□ -0.46
CBWD3-204ENST00000377349 RNASE13Q5GAN3 156 aaKnown RBP12.15□□□□□ -0.46
CBWD3-204ENST00000377349 MRPL54Q6P161 138 aaKnown RBP12.15□□□□□ -0.46
CBWD3-204ENST00000377349 LINC00526Q96FQ7 95 aa12.15□□□□□ -0.46
CBWD3-204ENST00000377349 KIR2DL4Q99706 377 aa12.15□□□□□ -0.46
CBWD3-204ENST00000377349 A0A087WYN8 130 aa12.14□□□□□ -0.47
CBWD3-204ENST00000377349 PPP1R17O96001 155 aa12.14□□□□□ -0.47
CBWD3-204ENST00000377349 MRPL51Q4U2R6 128 aaKnown RBP12.14□□□□□ -0.47
CBWD3-204ENST00000377349 Q6ZRU5 148 aa12.14□□□□□ -0.47
CBWD3-204ENST00000377349 ZNF664Q8N3J9 261 aa12.14□□□□□ -0.47
CBWD3-204ENST00000377349 GVQW2A0A096LPI5 108 aaPredicted RBP12.13□□□□□ -0.47
CBWD3-204ENST00000377349 SMIM27A0A1W2PRY6 76 aa12.13□□□□□ -0.47
CBWD3-204ENST00000377349 MAJINQ3KP22 176 aa12.13□□□□□ -0.47
CBWD3-204ENST00000377349 NRACQ8N912 160 aa12.13□□□□□ -0.47
CBWD3-204ENST00000377349 SPACA4Q8TDM5 124 aa12.13□□□□□ -0.47
CBWD3-204ENST00000377349 CDC42SE2Q9NRR3 84 aa12.13□□□□□ -0.47
CBWD3-204ENST00000377349 CKS2P33552 79 aa12.12□□□□□ -0.47
CBWD3-204ENST00000377349 FAM104BQ5XKR9 115 aa12.12□□□□□ -0.47
CBWD3-204ENST00000377349 PRSS3P2Q8NHM4 247 aa12.12□□□□□ -0.47
CBWD3-204ENST00000377349 MRPL52Q86TS9 123 aaKnown RBP12.11□□□□□ -0.47
CBWD3-204ENST00000377349 IGHV1-58A0A0C4DH39 117 aa12.11□□□□□ -0.47
CBWD3-204ENST00000377349 PPP1R2P9O14990 202 aa12.11□□□□□ -0.47
CBWD3-204ENST00000377349 TRAV13-1A0A0B4J241 112 aa12.1□□□□□ -0.47
CBWD3-204ENST00000377349 ZNF561-AS1K7EIQ3 104 aa12.1□□□□□ -0.47
CBWD3-204ENST00000377349 MALP21145 153 aa12.1□□□□□ -0.47
CBWD3-204ENST00000377349 HBBP68871 147 aa12.1□□□□□ -0.47
CBWD3-204ENST00000377349 SMAGPQ0VAQ4 97 aa12.1□□□□□ -0.47
CBWD3-204ENST00000377349 A0A1B0GW15 77 aa12.09□□□□□ -0.47
CBWD3-204ENST00000377349 CD164L2Q6UWJ8 174 aa12.09□□□□□ -0.47
CBWD3-204ENST00000377349 CARD19Q96LW7 228 aa12.09□□□□□ -0.47
CBWD3-204ENST00000377349 SMDT1Q9H4I9 107 aa12.09□□□□□ -0.47
CBWD3-204ENST00000377349 UBE2D4Q9Y2X8 147 aa12.09□□□□□ -0.47
CBWD3-204ENST00000377349 D6R8Y8 96 aa12.08□□□□□ -0.48
CBWD3-204ENST00000377349 Q6ZUT4 128 aa12.08□□□□□ -0.48
CBWD3-204ENST00000377349 C7orf33Q8WU49 177 aa12.08□□□□□ -0.48
CBWD3-204ENST00000377349 TMEM18Q96B42 140 aa12.08□□□□□ -0.48
CBWD3-204ENST00000377349 PLAC8Q9NZF1 115 aa12.08□□□□□ -0.48
CBWD3-204ENST00000377349 A0A096LNI7 61 aa12.07□□□□□ -0.48
CBWD3-204ENST00000377349 F8W036 122 aa12.07□□□□□ -0.48
CBWD3-204ENST00000377349 TNFRSF6BO95407 300 aa12.07□□□□□ -0.48
CBWD3-204ENST00000377349 S100A8P05109 93 aa12.07□□□□□ -0.48
CBWD3-204ENST00000377349 STPG4Q8N801 248 aa12.07□□□□□ -0.48
CBWD3-204ENST00000377349 PHOX2AO14813 284 aa12.06□□□□□ -0.48
CBWD3-204ENST00000377349 LINC00862A6NCI5 91 aa12.05□□□□□ -0.48
CBWD3-204ENST00000377349 C1orf196B1AJZ1 125 aa12.05□□□□□ -0.48
CBWD3-204ENST00000377349 COX7A2LO14548 114 aa12.05□□□□□ -0.48
CBWD3-204ENST00000377349 RPL39P62891 51 aaKnown RBP12.05□□□□□ -0.48
CBWD3-204ENST00000377349 C20orf78Q9BR46 151 aa12.05□□□□□ -0.48
CBWD3-204ENST00000377349 NPYP01303 97 aa12.04□□□□□ -0.48
CBWD3-204ENST00000377349 SYCNQ0VAF6 134 aa12.04□□□□□ -0.48
CBWD3-204ENST00000377349 SMIM2Q9BVW6 85 aa12.04□□□□□ -0.48
CBWD3-204ENST00000377349 TCAPO15273 167 aa12.03□□□□□ -0.48
CBWD3-204ENST00000377349 C5orf38Q86SI9 138 aa12.03□□□□□ -0.48
CBWD3-204ENST00000377349 IGLV4-69A0A075B6H9 119 aa12.03□□□□□ -0.48
CBWD3-204ENST00000377349 LCE2BO14633 110 aa12.03□□□□□ -0.48
CBWD3-204ENST00000377349 CSDC2Q9Y534 153 aaKnown RBP12.03□□□□□ -0.48
CBWD3-204ENST00000377349 A0A1B0GXF2 115 aa12.02□□□□□ -0.49
CBWD3-204ENST00000377349 RAB14P61106 215 aa12.02□□□□□ -0.49
CBWD3-204ENST00000377349 PKIGQ9Y2B9 76 aa12.02□□□□□ -0.49
CBWD3-204ENST00000377349 TRBV24-1A0A075B6N3 115 aa12.01□□□□□ -0.49
CBWD3-204ENST00000377349 GAGE2BQ13066 116 aa12.01□□□□□ -0.49
CBWD3-204ENST00000377349 CAMK2N2Q96S95 79 aa12.01□□□□□ -0.49
CBWD3-204ENST00000377349 OPRPNQ99935 248 aaPredicted RBP12.01□□□□□ -0.49
CBWD3-204ENST00000377349 ORMDL3Q8N138 153 aa12□□□□□ -0.49
CBWD3-204ENST00000377349 LINC00474Q9P2X8 69 aa12□□□□□ -0.49
CBWD3-204ENST00000377349 RAB5AP20339 215 aa11.99□□□□□ -0.49
CBWD3-204ENST00000377349 TMEM136Q6ZRR5 245 aa11.99□□□□□ -0.49
CBWD3-204ENST00000377349 PRELID3AQ96N28 172 aa11.99□□□□□ -0.49
CBWD3-204ENST00000377349 TIMM21Q9BVV7 248 aa11.99□□□□□ -0.49
CBWD3-204ENST00000377349 LOC389332A0A1B0GUA5 103 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms