RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 UBE2D4Q9Y2X8 147 aa7.22□□□□□ -1.25
PDPN-203ENST00000376061 TIRAPP58753 221 aa7.21□□□□□ -1.25
PDPN-203ENST00000376061 PYY3Q5JQD4 70 aa7.21□□□□□ -1.25
PDPN-203ENST00000376061 CEMP1Q6PRD7 247 aaPredicted RBP7.21□□□□□ -1.25
PDPN-203ENST00000376061 TMEM141Q96I45 108 aa7.21□□□□□ -1.25
PDPN-203ENST00000376061 TIMM21Q9BVV7 248 aa7.21□□□□□ -1.25
PDPN-203ENST00000376061 PYGO1Q9Y3Y4 419 aa7.21□□□□□ -1.25
PDPN-203ENST00000376061 IGLV4-3A0A075B6K6 122 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 H0Y8G0 127 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 FAM229AH3BQW9 127 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 UBE2L6O14933 153 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 FGF6P10767 208 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 JOSD1Q15040 202 aaPredicted RBP7.2□□□□□ -1.26
PDPN-203ENST00000376061 Q6ZUT4 128 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 MRPL52Q86TS9 123 aaKnown RBP7.2□□□□□ -1.26
PDPN-203ENST00000376061 C15orf53Q8NAA6 179 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 BAALCQ8WXS3 180 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 FAM104AQ969W3 186 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 OPRPNQ99935 248 aaPredicted RBP7.2□□□□□ -1.26
PDPN-203ENST00000376061 CHCHD5Q9BSY4 110 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 H7C423 109 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 SMIM6P0DI80 62 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 GAGE6Q13070 117 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 LELP1Q5T871 98 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 LINC01545Q5VT33 79 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 LYPD5Q6UWN5 251 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 Q6ZN92 141 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 LINC00469Q8N7U9 141 aa7.2□□□□□ -1.26
PDPN-203ENST00000376061 IGLL5B9A064 214 aa7.19□□□□□ -1.26
PDPN-203ENST00000376061 PRSS1P07477 247 aa7.19□□□□□ -1.26
PDPN-203ENST00000376061 NPSP0C0P6 89 aa7.19□□□□□ -1.26
PDPN-203ENST00000376061 MRPS36P82909 103 aaKnown RBP7.19□□□□□ -1.26
PDPN-203ENST00000376061 ZC2HC1BQ5TFG8 222 aa7.19□□□□□ -1.26
PDPN-203ENST00000376061 AMMECR1LQ6DCA0 310 aa7.19□□□□□ -1.26
PDPN-203ENST00000376061 CSDC2Q9Y534 153 aaKnown RBP7.19□□□□□ -1.26
PDPN-203ENST00000376061 TRAV12-1A0A0B4J245 112 aa7.18□□□□□ -1.26
PDPN-203ENST00000376061 C20orf202A1L168 122 aa7.18□□□□□ -1.26
PDPN-203ENST00000376061 ZNF25P17030 456 aaPredicted RBP7.18□□□□□ -1.26
PDPN-203ENST00000376061 CTAG1AP78358 180 aa7.18□□□□□ -1.26
PDPN-203ENST00000376061 SMAGPQ0VAQ4 97 aa7.18□□□□□ -1.26
PDPN-203ENST00000376061 ESRGQ1W209 222 aa7.18□□□□□ -1.26
PDPN-203ENST00000376061 RNASE13Q5GAN3 156 aaKnown RBP7.18□□□□□ -1.26
PDPN-203ENST00000376061 LGALS9CQ6DKI2 356 aa7.18□□□□□ -1.26
PDPN-203ENST00000376061 CDPF1Q6NVV7 123 aa7.18□□□□□ -1.26
PDPN-203ENST00000376061 OR5A1Q8NGJ0 315 aa7.18□□□□□ -1.26
PDPN-203ENST00000376061 PMCHL2Q9BQD1 86 aa7.18□□□□□ -1.26
PDPN-203ENST00000376061 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
PDPN-203ENST00000376061 TGP01266 2768 aa7.17□□□□□ -1.26
PDPN-203ENST00000376061 A0A087WX48 190 aa7.17□□□□□ -1.26
PDPN-203ENST00000376061 NUPR2A6NF83 97 aa7.17□□□□□ -1.26
PDPN-203ENST00000376061 PMVKQ15126 192 aa7.17□□□□□ -1.26
PDPN-203ENST00000376061 MPV17L2Q567V2 206 aa7.17□□□□□ -1.26
PDPN-203ENST00000376061 PAPPA-AS1Q5QFB9 102 aa7.17□□□□□ -1.26
PDPN-203ENST00000376061 DGAT2L7PQ6IED9 249 aa7.17□□□□□ -1.26
PDPN-203ENST00000376061 AMELXQ99217 191 aa7.17□□□□□ -1.26
PDPN-203ENST00000376061 CST9LQ9H4G1 147 aa7.17□□□□□ -1.26
PDPN-203ENST00000376061 DYNC2H1Q8NCM8 4307 aaKnown RBP7.17□□□□□ -1.26
PDPN-203ENST00000376061 IGLV4-60A0A075B6I1 120 aa7.16□□□□□ -1.26
PDPN-203ENST00000376061 PRSS29PA6NIE9 313 aa7.16□□□□□ -1.26
PDPN-203ENST00000376061 RBX1P62877 108 aa7.16□□□□□ -1.26
PDPN-203ENST00000376061 TEX43Q6ZNM6 134 aa7.16□□□□□ -1.26
PDPN-203ENST00000376061 WFDC10BQ8IUB3 73 aa7.16□□□□□ -1.26
PDPN-203ENST00000376061 TMEM101Q96IK0 257 aa7.16□□□□□ -1.26
PDPN-203ENST00000376061 VCX2Q9H322 139 aa7.16□□□□□ -1.26
PDPN-203ENST00000376061 CDC42SE2Q9NRR3 84 aa7.16□□□□□ -1.26
PDPN-203ENST00000376061 MRPL35Q9NZE8 188 aaKnown RBP7.16□□□□□ -1.26
PDPN-203ENST00000376061 DNAH7Q8WXX0 4024 aa7.16□□□□□ -1.26
PDPN-203ENST00000376061 CSMD3Q7Z407 3707 aa7.15□□□□□ -1.26
PDPN-203ENST00000376061 TRAV8-6A0A0B4J262 113 aa7.15□□□□□ -1.26
PDPN-203ENST00000376061 TMEM262E9PQX1 116 aa7.15□□□□□ -1.26
PDPN-203ENST00000376061 F8VRH5 84 aa7.15□□□□□ -1.26
PDPN-203ENST00000376061 PKIAP61925 76 aa7.15□□□□□ -1.26
PDPN-203ENST00000376061 ATOH7Q8N100 152 aa7.15□□□□□ -1.26
PDPN-203ENST00000376061 ZNF664Q8N3J9 261 aa7.15□□□□□ -1.26
PDPN-203ENST00000376061 IGLV4-69A0A075B6H9 119 aa7.14□□□□□ -1.27
PDPN-203ENST00000376061 A0A1B0GUV1 79 aa7.14□□□□□ -1.27
PDPN-203ENST00000376061 DPM2O94777 84 aa7.14□□□□□ -1.27
PDPN-203ENST00000376061 LCE1DQ5T752 114 aa7.14□□□□□ -1.27
PDPN-203ENST00000376061 LINC00518Q8N0U6 118 aa7.14□□□□□ -1.27
PDPN-203ENST00000376061 C12orf57Q99622 126 aa7.14□□□□□ -1.27
PDPN-203ENST00000376061 C2orf88Q9BSF0 95 aa7.14□□□□□ -1.27
PDPN-203ENST00000376061 APLNQ9ULZ1 77 aa7.14□□□□□ -1.27
PDPN-203ENST00000376061 KLK5Q9Y337 293 aaPredicted RBP7.14□□□□□ -1.27
PDPN-203ENST00000376061 MRPS16Q9Y3D3 137 aaKnown RBP7.14□□□□□ -1.27
PDPN-203ENST00000376061 LINC00588Q9Y4M8 146 aa7.14□□□□□ -1.27
PDPN-203ENST00000376061 GAGE10A6NGK3 116 aa7.13□□□□□ -1.27
PDPN-203ENST00000376061 PLNP26678 52 aa7.13□□□□□ -1.27
PDPN-203ENST00000376061 UBE2D1P51668 147 aa7.13□□□□□ -1.27
PDPN-203ENST00000376061 C11orf86A6NJI1 115 aa7.12□□□□□ -1.27
PDPN-203ENST00000376061 IGKCP01834 107 aa7.12□□□□□ -1.27
PDPN-203ENST00000376061 IGLC3P0DOY3 106 aa7.12□□□□□ -1.27
PDPN-203ENST00000376061 CCL18P55774 89 aa7.12□□□□□ -1.27
PDPN-203ENST00000376061 CHAC1Q9BUX1 264 aa7.12□□□□□ -1.27
PDPN-203ENST00000376061 A0A0J9YXV3 536 aa7.11□□□□□ -1.27
PDPN-203ENST00000376061 IGHV3-30P01768 117 aa7.11□□□□□ -1.27
PDPN-203ENST00000376061 IGHV3-33P01772 117 aa7.11□□□□□ -1.27
PDPN-203ENST00000376061 ANGP03950 147 aaKnown RBP7.11□□□□□ -1.27
PDPN-203ENST00000376061 IGHV3-30-3P0DP02 117 aa7.11□□□□□ -1.27
PDPN-203ENST00000376061 IGHV3-30-5P0DP03 117 aa7.11□□□□□ -1.27
PDPN-203ENST00000376061 ZFAND6Q6FIF0 208 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms