RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 IGLV8-61A0A075B6I0 122 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 TRBV6-8A0A0A6YYG3 113 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 LOC100131303A0A0U1RQF7 123 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 LINC01565O15544 149 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 FAM229AH3BQW9 127 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 PLA2G5P39877 138 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 BRD3OSQ6XYD6 125 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 Q8N814 137 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 IGLV9-49A0A0B4J1Y8 123 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 COL5A1P20908 1838 aaPredicted RBP4.53□□□□□ -1.68
SCN2A-202ENST00000375427 LINC00474Q9P2X8 69 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 H3BRN7 92 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 TRAV22A0A0B4J277 110 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 SHISA4Q96DD7 197 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 RPL39P62891 51 aaKnown RBP4.52□□□□□ -1.69
SCN2A-202ENST00000375427 RSPO2Q6UXX9 243 aaPredicted RBP4.52□□□□□ -1.69
SCN2A-202ENST00000375427 LINC01560Q8TB33 94 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 C10orf55Q5SWW7 151 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 HRKO00198 91 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 IGKV1-17P01599 117 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 ALKAL1Q6UXT8 129 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 JMJD1CQ15652 2540 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 C20orf204Q6ZNR8 217 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 PRR15Q8IV56 129 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 MUC7Q8TAX7 377 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 IGKV1-12A0A0C4DH73 117 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 NTM-AS1Q6ZSK4 140 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 ZNF833PQ6ZTB9 187 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 LINC01600Q96MT4 127 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 LY6LH3BQJ8 138 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 IGHV1-46P01743 117 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 Q8TCH9 128 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 IGLV2-23P01705 113 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 LINC00575Q6W349 94 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.51□□□□□ -1.69
SCN2A-202ENST00000375427 IGLV4-3A0A075B6K6 122 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 LINC00173Q6ZV60 143 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 FAM110DQ8TAY7 271 aaPredicted RBP4.51□□□□□ -1.69
SCN2A-202ENST00000375427 H3BUA1 57 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 COL9A3Q14050 684 aaPredicted RBP4.51□□□□□ -1.69
SCN2A-202ENST00000375427 LINC01356Q8N9X3 169 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 IGKV2D-30A0A075B6S6 120 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 A0A0G2JRQ6 117 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 LINC00322Q6ZN03 302 aaPredicted RBP4.51□□□□□ -1.69
SCN2A-202ENST00000375427 WFDC5Q8TCV5 224 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 A0A1B0GW54 56 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 ZNF883P0CG24 379 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 E7EQL1 145 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 SPRR3Q9UBC9 169 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 MGAMO43451 1857 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 BCORQ6W2J9 1755 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 SMIM1B2RUZ4 78 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 LINC01590Q5TEZ4 76 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 H3BPC8 53 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 IGLV7-43P04211 117 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 MSMPQ1L6U9 139 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 C1orf137Q5JT78 98 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 SAP25Q8TEE9 199 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 SNED1Q8TER0 1413 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 CIRBP-AS1Q8TBR5 109 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 TM2D3Q9BRN9 247 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 TNRC6CQ9HCJ0 1690 aaKnown RBP4.49□□□□□ -1.69
SCN2A-202ENST00000375427 KIAA1549LQ6ZVL6 1849 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 SRRM5B3KS81 715 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 LYPD5Q6UWN5 251 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 IGLV3-25P01717 112 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 MIR22HGQ0VDD5 57 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 EIF4EBP1Q13541 118 aaPredicted RBP4.49□□□□□ -1.69
SCN2A-202ENST00000375427 C9orf129Q5T035 196 aaKnown RBP4.49□□□□□ -1.69
SCN2A-202ENST00000375427 APLNQ9ULZ1 77 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 ZNF142P52746 1687 aaPredicted RBP4.49□□□□□ -1.69
SCN2A-202ENST00000375427 PCSK5Q92824 1860 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 IGLV4-69A0A075B6H9 119 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 IGKV2-28A0A075B6P5 120 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 IGKV2D-28P01615 120 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 SIP14410 1827 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 DEFB103AP81534 67 aa4.48□□□□□ -1.69
SCN2A-202ENST00000375427 C9orf66Q5T8R8 295 aa4.48□□□□□ -1.69
SCN2A-202ENST00000375427 CISD3P0C7P0 127 aa4.48□□□□□ -1.69
SCN2A-202ENST00000375427 ATP6V0E1O15342 81 aa4.48□□□□□ -1.69
SCN2A-202ENST00000375427 HMGA1P17096 107 aaKnown RBP4.48□□□□□ -1.69
SCN2A-202ENST00000375427 IGF2-ASQ6U949 168 aa4.48□□□□□ -1.69
SCN2A-202ENST00000375427 ADAMTS20P59510 1910 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 ZNF843Q8N446 348 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.47□□□□□ -1.69
SCN2A-202ENST00000375427 ADAMTSL3P82987 1691 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 ARTNQ5T4W7 220 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 TPSG1Q9NRR2 321 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 WIPF1O43516 503 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 KIAA0087Q14695 138 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 CDIP1Q9H305 208 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 LINC00473A8K010 186 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 USP9XQ93008 2570 aaPredicted RBP4.47□□□□□ -1.69
SCN2A-202ENST00000375427 BCE1O60756 84 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 Q9UF83 564 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 EIF4EBP2Q13542 120 aaPredicted RBP4.46□□□□□ -1.7
SCN2A-202ENST00000375427 FAM27E3Q08E93 113 aa4.46□□□□□ -1.7
SCN2A-202ENST00000375427 C1orf134Q5TEV5 83 aa4.46□□□□□ -1.7
SCN2A-202ENST00000375427 SMIM11BQ8TCY0 68 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms