RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 FAM223BA6NKX1 122 aa14.95□□□□□ -0.02
TMEFF1-201ENST00000374879 IGHV3-11P01762 117 aa14.95□□□□□ -0.02
TMEFF1-201ENST00000374879 FAM223AQ8IWN6 122 aa14.95□□□□□ -0.02
TMEFF1-201ENST00000374879 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.95□□□□□ -0.02
TMEFF1-201ENST00000374879 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.95□□□□□ -0.02
TMEFF1-201ENST00000374879 IGKV2-29A2NJV5 120 aaPredicted RBP14.95□□□□□ -0.02
TMEFF1-201ENST00000374879 EDN2P20800 178 aa14.95□□□□□ -0.02
TMEFF1-201ENST00000374879 HOXD3P31249 432 aaPredicted RBP14.95□□□□□ -0.02
TMEFF1-201ENST00000374879 C9orf129Q5T035 196 aaKnown RBP14.95□□□□□ -0.02
TMEFF1-201ENST00000374879 UBE2D4Q9Y2X8 147 aa14.95□□□□□ -0.02
TMEFF1-201ENST00000374879 PRIMA1Q86XR5 153 aa14.94□□□□□ -0.02
TMEFF1-201ENST00000374879 C5orf56Q8N8D9 126 aa14.94□□□□□ -0.02
TMEFF1-201ENST00000374879 Q9UF83 564 aa14.94□□□□□ -0.02
TMEFF1-201ENST00000374879 LINC01561Q8N1V8 128 aa14.93□□□□□ -0.02
TMEFF1-201ENST00000374879 DNAL4O96015 105 aa14.92□□□□□ -0.02
TMEFF1-201ENST00000374879 CHCHD7Q9BUK0 85 aa14.92□□□□□ -0.02
TMEFF1-201ENST00000374879 C14orf132Q9NPU4 83 aa14.92□□□□□ -0.02
TMEFF1-201ENST00000374879 LINC00846Q9NV44 126 aa14.91□□□□□ -0.02
TMEFF1-201ENST00000374879 IGHV1OR15-1A0A075B7D0 117 aa14.91□□□□□ -0.02
TMEFF1-201ENST00000374879 USP17L23D6RBM5 183 aa14.91□□□□□ -0.02
TMEFF1-201ENST00000374879 COX6A2Q02221 97 aa14.9□□□□□ -0.02
TMEFF1-201ENST00000374879 C19orf54Q5BKX5 351 aa14.9□□□□□ -0.02
TMEFF1-201ENST00000374879 Q6JHZ5 121 aa14.9□□□□□ -0.02
TMEFF1-201ENST00000374879 SYNJ2BPP57105 145 aa14.89□□□□□ -0.03
TMEFF1-201ENST00000374879 C10orf105Q8TEF2 133 aa14.88□□□□□ -0.03
TMEFF1-201ENST00000374879 LINC00467Q9BRT7 94 aa14.88□□□□□ -0.03
TMEFF1-201ENST00000374879 SPINK13Q1W4C9 94 aa14.87□□□□□ -0.03
TMEFF1-201ENST00000374879 FHL2Q14192 279 aa14.87□□□□□ -0.03
TMEFF1-201ENST00000374879 MOB4Q9Y3A3 225 aa14.86□□□□□ -0.03
TMEFF1-201ENST00000374879 IGLV5-45A0A087WSX0 123 aa14.86□□□□□ -0.03
TMEFF1-201ENST00000374879 PIK3CD-AS1Q5SR53 167 aa14.86□□□□□ -0.03
TMEFF1-201ENST00000374879 C19orf84I3L1E1 186 aa14.85□□□□□ -0.03
TMEFF1-201ENST00000374879 HIST2H2BCQ6DN03 193 aa14.85□□□□□ -0.03
TMEFF1-201ENST00000374879 HIST2H2BDQ6DRA6 164 aa14.85□□□□□ -0.03
TMEFF1-201ENST00000374879 KNCNA6PVL3 124 aa14.84□□□□□ -0.03
TMEFF1-201ENST00000374879 BRD3OSQ6XYD6 125 aa14.84□□□□□ -0.03
TMEFF1-201ENST00000374879 IGHV3-38A0A0C4DH36 116 aa14.84□□□□□ -0.03
TMEFF1-201ENST00000374879 IGLV5-39A0A0G2JS06 123 aa14.83□□□□□ -0.03
TMEFF1-201ENST00000374879 Q6ZSN1 163 aa14.83□□□□□ -0.03
TMEFF1-201ENST00000374879 COPS9Q8WXC6 57 aa14.83□□□□□ -0.03
TMEFF1-201ENST00000374879 CSMD2Q7Z408 3487 aa14.83□□□□□ -0.04
TMEFF1-201ENST00000374879 A0A087WYN8 130 aa14.82□□□□□ -0.04
TMEFF1-201ENST00000374879 HTN1P15515 57 aa14.82□□□□□ -0.04
TMEFF1-201ENST00000374879 ZNF415Q09FC8 603 aa14.82□□□□□ -0.04
TMEFF1-201ENST00000374879 RPL28P46779 137 aaKnown RBP14.81□□□□□ -0.04
TMEFF1-201ENST00000374879 MRAPQ8TCY5 172 aa14.81□□□□□ -0.04
TMEFF1-201ENST00000374879 ABCA2Q9BZC7 2435 aa14.8□□□□□ -0.04
TMEFF1-201ENST00000374879 DOPEY2Q9Y3R5 2298 aa14.8□□□□□ -0.04
TMEFF1-201ENST00000374879 SORL1Q92673 2214 aa14.79□□□□□ -0.04
TMEFF1-201ENST00000374879 IGHV3OR16-12A0A075B7B8 117 aa14.79□□□□□ -0.04
TMEFF1-201ENST00000374879 HILS1P60008 231 aa14.79□□□□□ -0.04
TMEFF1-201ENST00000374879 LINC00242Q5T6M2 205 aa14.79□□□□□ -0.04
TMEFF1-201ENST00000374879 ITPR1Q14643 2758 aa14.79□□□□□ -0.04
TMEFF1-201ENST00000374879 SMIM1B2RUZ4 78 aa14.78□□□□□ -0.04
TMEFF1-201ENST00000374879 LY6EQ16553 131 aa14.78□□□□□ -0.04
TMEFF1-201ENST00000374879 OBSCN-AS1Q96MR7 158 aa14.78□□□□□ -0.04
TMEFF1-201ENST00000374879 PRM2P04554 102 aa14.78□□□□□ -0.04
TMEFF1-201ENST00000374879 NCR3O14931 201 aa14.77□□□□□ -0.04
TMEFF1-201ENST00000374879 DGAT2L7PQ6IED9 249 aa14.77□□□□□ -0.04
TMEFF1-201ENST00000374879 LINC00337Q8N6G1 96 aa14.77□□□□□ -0.04
TMEFF1-201ENST00000374879 USMG5Q96IX5 58 aa14.77□□□□□ -0.04
TMEFF1-201ENST00000374879 GNLYP22749 145 aa14.77□□□□□ -0.05
TMEFF1-201ENST00000374879 IGHV4-61A0A0C4DH41 118 aa14.76□□□□□ -0.05
TMEFF1-201ENST00000374879 TRAV13-2A0A0B4J235 113 aa14.76□□□□□ -0.05
TMEFF1-201ENST00000374879 RBMY1A1P0DJD3 496 aaKnown RBP14.75□□□□□ -0.05
TMEFF1-201ENST00000374879 RBMY1CP0DJD4 496 aa14.75□□□□□ -0.05
TMEFF1-201ENST00000374879 IGHV4-38-2P0DP08 117 aa14.75□□□□□ -0.05
TMEFF1-201ENST00000374879 RBMY1FQ15415 496 aaKnown RBP14.75□□□□□ -0.05
TMEFF1-201ENST00000374879 PRORYQ9H606 182 aa14.75□□□□□ -0.05
TMEFF1-201ENST00000374879 CELSR2Q9HCU4 2923 aa14.75□□□□□ -0.05
TMEFF1-201ENST00000374879 CRPP02741 224 aa14.75□□□□□ -0.05
TMEFF1-201ENST00000374879 WFDC9Q8NEX5 89 aa14.75□□□□□ -0.05
TMEFF1-201ENST00000374879 SPG11Q96JI7 2443 aa14.74□□□□□ -0.05
TMEFF1-201ENST00000374879 GHRHP01286 108 aa14.74□□□□□ -0.05
TMEFF1-201ENST00000374879 PFN2P35080 140 aa14.74□□□□□ -0.05
TMEFF1-201ENST00000374879 PIMREGQ9BSJ6 248 aa14.74□□□□□ -0.05
TMEFF1-201ENST00000374879 CRYBG3Q68DQ2 2970 aa14.73□□□□□ -0.05
TMEFF1-201ENST00000374879 SMIM11BQ8TCY0 68 aa14.73□□□□□ -0.05
TMEFF1-201ENST00000374879 IGKV2-28A0A075B6P5 120 aa14.73□□□□□ -0.05
TMEFF1-201ENST00000374879 H3BUX3 64 aa14.73□□□□□ -0.05
TMEFF1-201ENST00000374879 IGKV2D-28P01615 120 aa14.73□□□□□ -0.05
TMEFF1-201ENST00000374879 PF4P02776 101 aa14.73□□□□□ -0.05
TMEFF1-201ENST00000374879 NDUFC2O95298 119 aa14.72□□□□□ -0.05
TMEFF1-201ENST00000374879 TRAV23DV6A0A075B6W5 121 aa14.72□□□□□ -0.05
TMEFF1-201ENST00000374879 OVOL2Q9BRP0 275 aa14.72□□□□□ -0.05
TMEFF1-201ENST00000374879 SNRPD3P62318 126 aaKnown RBP14.71□□□□□ -0.05
TMEFF1-201ENST00000374879 LINC00336Q6ZUF6 198 aa14.71□□□□□ -0.05
TMEFF1-201ENST00000374879 TMEM243Q9BU79 118 aa14.71□□□□□ -0.05
TMEFF1-201ENST00000374879 NDUFC2-KCTD14E9PQ53 114 aa14.71□□□□□ -0.06
TMEFF1-201ENST00000374879 BLCAPP62952 87 aa14.71□□□□□ -0.06
TMEFF1-201ENST00000374879 LECT2O14960 151 aa14.7□□□□□ -0.06
TMEFF1-201ENST00000374879 SLPIP03973 132 aa14.7□□□□□ -0.06
TMEFF1-201ENST00000374879 C20orf197Q8N268 126 aa14.7□□□□□ -0.06
TMEFF1-201ENST00000374879 K7EMT4 169 aa14.69□□□□□ -0.06
TMEFF1-201ENST00000374879 CCL19Q99731 98 aa14.69□□□□□ -0.06
TMEFF1-201ENST00000374879 UTP20O75691 2785 aaKnown RBP14.69□□□□□ -0.06
TMEFF1-201ENST00000374879 A6NDX4 124 aa14.68□□□□□ -0.06
TMEFF1-201ENST00000374879 H3BUA1 57 aa14.68□□□□□ -0.06
TMEFF1-201ENST00000374879 SND1-IT1Q9HBX3 110 aa14.68□□□□□ -0.06
TMEFF1-201ENST00000374879 PRO0628Q9UI54 55 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms