RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 USP17L23D6RBM5 183 aa7.9□□□□□ -1.14
HDAC8-201ENST00000373554 S100PP25815 95 aa7.9□□□□□ -1.14
HDAC8-201ENST00000373554 KRTAP26-1Q6PEX3 210 aa7.9□□□□□ -1.14
HDAC8-201ENST00000373554 TMEM136Q6ZRR5 245 aa7.9□□□□□ -1.14
HDAC8-201ENST00000373554 MRPL52Q86TS9 123 aaKnown RBP7.9□□□□□ -1.14
HDAC8-201ENST00000373554 TMEM18Q96B42 140 aa7.9□□□□□ -1.14
HDAC8-201ENST00000373554 LAMTOR2Q9Y2Q5 125 aa7.9□□□□□ -1.14
HDAC8-201ENST00000373554 CARHSP1Q9Y2V2 147 aaKnown RBP7.9□□□□□ -1.14
HDAC8-201ENST00000373554 LRP1BQ9NZR2 4599 aa7.9□□□□□ -1.15
HDAC8-201ENST00000373554 RHEBQ15382 184 aa7.89□□□□□ -1.15
HDAC8-201ENST00000373554 C10orf91Q5T1B1 145 aa7.89□□□□□ -1.15
HDAC8-201ENST00000373554 DGAT2L7PQ6IED9 249 aa7.89□□□□□ -1.15
HDAC8-201ENST00000373554 DNAH5Q8TE73 4624 aa7.88□□□□□ -1.15
HDAC8-201ENST00000373554 NDUFA5Q16718 116 aa7.88□□□□□ -1.15
HDAC8-201ENST00000373554 GAGE12HA6NDE8 117 aa7.87□□□□□ -1.15
HDAC8-201ENST00000373554 RAB5AP20339 215 aa7.87□□□□□ -1.15
HDAC8-201ENST00000373554 ZNF664Q8N3J9 261 aa7.87□□□□□ -1.15
HDAC8-201ENST00000373554 CLRN3Q8NCR9 226 aa7.87□□□□□ -1.15
HDAC8-201ENST00000373554 CHCHD10Q8WYQ3 142 aaPredicted RBP7.87□□□□□ -1.15
HDAC8-201ENST00000373554 MAP1LC3AQ9H492 121 aa7.87□□□□□ -1.15
HDAC8-201ENST00000373554 RPS10P5Q9NQ39 176 aa7.87□□□□□ -1.15
HDAC8-201ENST00000373554 CDC42SE2Q9NRR3 84 aa7.87□□□□□ -1.15
HDAC8-201ENST00000373554 UBE2D4Q9Y2X8 147 aa7.87□□□□□ -1.15
HDAC8-201ENST00000373554 CSDC2Q9Y534 153 aaKnown RBP7.87□□□□□ -1.15
HDAC8-201ENST00000373554 TIMM21Q9BVV7 248 aa7.86□□□□□ -1.15
HDAC8-201ENST00000373554 LINC00959A0A1B0GUT2 108 aa7.85□□□□□ -1.15
HDAC8-201ENST00000373554 APOC3P02656 99 aa7.85□□□□□ -1.15
HDAC8-201ENST00000373554 PRSS1P07477 247 aa7.85□□□□□ -1.15
HDAC8-201ENST00000373554 SS18Q15532 418 aa7.85□□□□□ -1.15
HDAC8-201ENST00000373554 LOC389332A0A1B0GUA5 103 aa7.84□□□□□ -1.15
HDAC8-201ENST00000373554 hDV102S1A0JD36 115 aa7.84□□□□□ -1.15
HDAC8-201ENST00000373554 PRSS47A8MTI9 375 aa7.84□□□□□ -1.15
HDAC8-201ENST00000373554 CCL25O15444 150 aa7.84□□□□□ -1.15
HDAC8-201ENST00000373554 SNAPINO95295 136 aa7.84□□□□□ -1.15
HDAC8-201ENST00000373554 XCL1P47992 114 aa7.84□□□□□ -1.15
HDAC8-201ENST00000373554 RPL39P62891 51 aaKnown RBP7.84□□□□□ -1.15
HDAC8-201ENST00000373554 COX19Q49B96 90 aa7.84□□□□□ -1.15
HDAC8-201ENST00000373554 LINC01620Q4KN68 170 aa7.84□□□□□ -1.15
HDAC8-201ENST00000373554 CFAP161Q6P656 301 aa7.84□□□□□ -1.15
HDAC8-201ENST00000373554 SVBPQ8N300 66 aa7.84□□□□□ -1.15
HDAC8-201ENST00000373554 SPANXA1Q9NS26 97 aa7.84□□□□□ -1.15
HDAC8-201ENST00000373554 XGP55808 180 aa7.83□□□□□ -1.16
HDAC8-201ENST00000373554 Q6ZUT4 128 aa7.83□□□□□ -1.16
HDAC8-201ENST00000373554 Q8N8P6 123 aa7.83□□□□□ -1.16
HDAC8-201ENST00000373554 GNB1LQ9BYB4 327 aa7.83□□□□□ -1.16
HDAC8-201ENST00000373554 AP5S1Q9NUS5 200 aa7.83□□□□□ -1.16
HDAC8-201ENST00000373554 APOBP04114 4563 aaKnown RBP7.83□□□□□ -1.16
HDAC8-201ENST00000373554 MT-ND6P03923 174 aa7.82□□□□□ -1.16
HDAC8-201ENST00000373554 IFI27P40305 119 aaPredicted RBP7.82□□□□□ -1.16
HDAC8-201ENST00000373554 FOXI1Q12951 378 aa7.82□□□□□ -1.16
HDAC8-201ENST00000373554 RNASE13Q5GAN3 156 aaKnown RBP7.82□□□□□ -1.16
HDAC8-201ENST00000373554 Q8N1X5 172 aa7.82□□□□□ -1.16
HDAC8-201ENST00000373554 NXT2Q9NPJ8 142 aaKnown RBP7.82□□□□□ -1.16
HDAC8-201ENST00000373554 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.81□□□□□ -1.16
HDAC8-201ENST00000373554 TRAV13-1A0A0B4J241 112 aa7.81□□□□□ -1.16
HDAC8-201ENST00000373554 C1orf196B1AJZ1 125 aa7.81□□□□□ -1.16
HDAC8-201ENST00000373554 K7EMI3 77 aa7.81□□□□□ -1.16
HDAC8-201ENST00000373554 CNBPP62633 177 aaKnown RBP7.81□□□□□ -1.16
HDAC8-201ENST00000373554 HAMPP81172 84 aa7.81□□□□□ -1.16
HDAC8-201ENST00000373554 KIAA1644Q3SXP7 199 aa7.81□□□□□ -1.16
HDAC8-201ENST00000373554 ORMDL2Q53FV1 153 aa7.81□□□□□ -1.16
HDAC8-201ENST00000373554 CD164L2Q6UWJ8 174 aa7.81□□□□□ -1.16
HDAC8-201ENST00000373554 Q6ZSA8 131 aa7.81□□□□□ -1.16
HDAC8-201ENST00000373554 C15orf56Q8N910 161 aa7.81□□□□□ -1.16
HDAC8-201ENST00000373554 FAM30AQ9NZY2 134 aa7.81□□□□□ -1.16
HDAC8-201ENST00000373554 HSPG2P98160 4391 aa7.8□□□□□ -1.16
HDAC8-201ENST00000373554 MRPS36P82909 103 aaKnown RBP7.8□□□□□ -1.16
HDAC8-201ENST00000373554 C9orf163Q8N9P6 203 aa7.8□□□□□ -1.16
HDAC8-201ENST00000373554 CYSLTR1Q9Y271 337 aa7.8□□□□□ -1.16
HDAC8-201ENST00000373554 GVQW2A0A096LPI5 108 aaPredicted RBP7.79□□□□□ -1.16
HDAC8-201ENST00000373554 IGHV1-58A0A0C4DH39 117 aa7.79□□□□□ -1.16
HDAC8-201ENST00000373554 HIGD2BQ4VC39 106 aa7.79□□□□□ -1.16
HDAC8-201ENST00000373554 MRPL18Q9H0U6 180 aaKnown RBP7.79□□□□□ -1.16
HDAC8-201ENST00000373554 PYGO1Q9Y3Y4 419 aa7.79□□□□□ -1.16
HDAC8-201ENST00000373554 IFITM10A6NMD0 228 aa7.78□□□□□ -1.16
HDAC8-201ENST00000373554 G0S2P27469 103 aa7.78□□□□□ -1.16
HDAC8-201ENST00000373554 C2orf66Q6UXQ4 117 aa7.78□□□□□ -1.16
HDAC8-201ENST00000373554 TGIF2-C20orf24A0A0A6YYL0 155 aa7.77□□□□□ -1.17
HDAC8-201ENST00000373554 EPM2AB3EWF7 344 aa7.77□□□□□ -1.17
HDAC8-201ENST00000373554 COX7A2LO14548 114 aa7.77□□□□□ -1.17
HDAC8-201ENST00000373554 MALP21145 153 aa7.77□□□□□ -1.17
HDAC8-201ENST00000373554 FABP9Q0Z7S8 132 aa7.77□□□□□ -1.17
HDAC8-201ENST00000373554 Q6ZN92 141 aa7.77□□□□□ -1.17
HDAC8-201ENST00000373554 PRSS3P2Q8NHM4 247 aa7.77□□□□□ -1.17
HDAC8-201ENST00000373554 TMEM141Q96I45 108 aa7.77□□□□□ -1.17
HDAC8-201ENST00000373554 OPRPNQ99935 248 aaPredicted RBP7.77□□□□□ -1.17
HDAC8-201ENST00000373554 ALKBH7Q9BT30 221 aaPredicted RBP7.77□□□□□ -1.17
HDAC8-201ENST00000373554 IGLV4-3A0A075B6K6 122 aa7.76□□□□□ -1.17
HDAC8-201ENST00000373554 IGHV3-64A0A075B6Q5 118 aa7.76□□□□□ -1.17
HDAC8-201ENST00000373554 SMR3BP02814 79 aaPredicted RBP7.76□□□□□ -1.17
HDAC8-201ENST00000373554 TEX43Q6ZNM6 134 aa7.76□□□□□ -1.17
HDAC8-201ENST00000373554 SCXQ7RTU7 201 aa7.76□□□□□ -1.17
HDAC8-201ENST00000373554 FAM104AQ969W3 186 aa7.76□□□□□ -1.17
HDAC8-201ENST00000373554 CHAC1Q9BUX1 264 aa7.76□□□□□ -1.17
HDAC8-201ENST00000373554 FAM229AH3BQW9 127 aa7.75□□□□□ -1.17
HDAC8-201ENST00000373554 ZNF561-AS1K7EIQ3 104 aa7.75□□□□□ -1.17
HDAC8-201ENST00000373554 SLPIP03973 132 aa7.75□□□□□ -1.17
HDAC8-201ENST00000373554 NPSP0C0P6 89 aa7.75□□□□□ -1.17
HDAC8-201ENST00000373554 Q5VSD8 79 aa7.75□□□□□ -1.17
HDAC8-201ENST00000373554 C2orf88Q9BSF0 95 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms