RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 IGF2-ASQ6U949 168 aa7.67□□□□□ -1.18
PRPF38B-201ENST00000370021 IGHV4-61A0A0C4DH41 118 aa7.66□□□□□ -1.18
PRPF38B-201ENST00000370021 IGHV4-59P01825 116 aa7.66□□□□□ -1.18
PRPF38B-201ENST00000370021 AMELXQ99217 191 aa7.66□□□□□ -1.18
PRPF38B-201ENST00000370021 A0A087WVE0 104 aa7.66□□□□□ -1.18
PRPF38B-201ENST00000370021 ADORA2A-AS1P86434 159 aa7.66□□□□□ -1.18
PRPF38B-201ENST00000370021 SBSPONQ8IVN8 264 aa7.66□□□□□ -1.18
PRPF38B-201ENST00000370021 TRGV2A0A075B6R0 118 aa7.65□□□□□ -1.18
PRPF38B-201ENST00000370021 A0A0J9YX75 114 aa7.65□□□□□ -1.18
PRPF38B-201ENST00000370021 Q8N2B8 174 aa7.65□□□□□ -1.18
PRPF38B-201ENST00000370021 LMO4P61968 165 aa7.65□□□□□ -1.18
PRPF38B-201ENST00000370021 FAM110AQ9BQ89 295 aa7.65□□□□□ -1.18
PRPF38B-201ENST00000370021 ITPR1Q14643 2758 aa7.65□□□□□ -1.19
PRPF38B-201ENST00000370021 LINC00308Q8TCZ7 52 aa7.65□□□□□ -1.19
PRPF38B-201ENST00000370021 NRGNQ92686 78 aa7.65□□□□□ -1.19
PRPF38B-201ENST00000370021 KLLNB2CW77 178 aa7.64□□□□□ -1.19
PRPF38B-201ENST00000370021 PIMREGQ9BSJ6 248 aa7.64□□□□□ -1.19
PRPF38B-201ENST00000370021 VPREB3Q9UKI3 123 aa7.64□□□□□ -1.19
PRPF38B-201ENST00000370021 MED14OSP0DP75 135 aa7.64□□□□□ -1.19
PRPF38B-201ENST00000370021 CLPSL2Q6UWE3 100 aa7.64□□□□□ -1.19
PRPF38B-201ENST00000370021 PEMTQ9UBM1 199 aa7.64□□□□□ -1.19
PRPF38B-201ENST00000370021 TRACP01848 142 aa7.64□□□□□ -1.19
PRPF38B-201ENST00000370021 TIRAPP58753 221 aa7.64□□□□□ -1.19
PRPF38B-201ENST00000370021 COX6A2Q02221 97 aa7.64□□□□□ -1.19
PRPF38B-201ENST00000370021 Q6ZSN1 163 aa7.64□□□□□ -1.19
PRPF38B-201ENST00000370021 C5orf38Q86SI9 138 aa7.64□□□□□ -1.19
PRPF38B-201ENST00000370021 WFDC9Q8NEX5 89 aa7.64□□□□□ -1.19
PRPF38B-201ENST00000370021 SLURP1P55000 103 aa7.63□□□□□ -1.19
PRPF38B-201ENST00000370021 RPL36AP83881 106 aaKnown RBP7.63□□□□□ -1.19
PRPF38B-201ENST00000370021 RPL36ALQ969Q0 106 aaKnown RBP7.63□□□□□ -1.19
PRPF38B-201ENST00000370021 ACANP16112 2415 aa7.63□□□□□ -1.19
PRPF38B-201ENST00000370021 TMEM126AQ9H061 195 aa7.63□□□□□ -1.19
PRPF38B-201ENST00000370021 LECT2O14960 151 aa7.63□□□□□ -1.19
PRPF38B-201ENST00000370021 ZNF415Q09FC8 603 aa7.63□□□□□ -1.19
PRPF38B-201ENST00000370021 CCL19Q99731 98 aa7.63□□□□□ -1.19
PRPF38B-201ENST00000370021 SOCS3O14543 225 aa7.62□□□□□ -1.19
PRPF38B-201ENST00000370021 LINC00643Q86TS7 51 aa7.62□□□□□ -1.19
PRPF38B-201ENST00000370021 C3orf22Q8N5N4 141 aa7.62□□□□□ -1.19
PRPF38B-201ENST00000370021 MIR7-3HGQ8N6C7 128 aa7.62□□□□□ -1.19
PRPF38B-201ENST00000370021 DCANP1Q8TF63 244 aa7.62□□□□□ -1.19
PRPF38B-201ENST00000370021 COX7A2LO14548 114 aa7.62□□□□□ -1.19
PRPF38B-201ENST00000370021 NCR3O14931 201 aa7.62□□□□□ -1.19
PRPF38B-201ENST00000370021 SND1-IT1Q9HBX3 110 aa7.62□□□□□ -1.19
PRPF38B-201ENST00000370021 TRBV6-5A0A0K0K1A5 114 aa7.61□□□□□ -1.19
PRPF38B-201ENST00000370021 INAFM2P0DMQ5 153 aa7.61□□□□□ -1.19
PRPF38B-201ENST00000370021 DSCR8Q96T75 97 aa7.61□□□□□ -1.19
PRPF38B-201ENST00000370021 A0A096LPF7 62 aa7.61□□□□□ -1.19
PRPF38B-201ENST00000370021 C6orf226Q5I0X4 101 aa7.6□□□□□ -1.19
PRPF38B-201ENST00000370021 Q6Q795 121 aa7.6□□□□□ -1.19
PRPF38B-201ENST00000370021 RNF152Q8N8N0 203 aa7.6□□□□□ -1.19
PRPF38B-201ENST00000370021 COPS9Q8WXC6 57 aa7.6□□□□□ -1.19
PRPF38B-201ENST00000370021 TRAV23DV6A0A075B6W5 121 aa7.6□□□□□ -1.19
PRPF38B-201ENST00000370021 K7ENP7 123 aa7.6□□□□□ -1.19
PRPF38B-201ENST00000370021 IGHG2P01859 326 aa7.6□□□□□ -1.19
PRPF38B-201ENST00000370021 MRPS36P82909 103 aaKnown RBP7.6□□□□□ -1.19
PRPF38B-201ENST00000370021 UQCRQO14949 82 aa7.6□□□□□ -1.19
PRPF38B-201ENST00000370021 RPL35AP18077 110 aaKnown RBP7.6□□□□□ -1.19
PRPF38B-201ENST00000370021 DEFB112Q30KQ8 113 aa7.6□□□□□ -1.19
PRPF38B-201ENST00000370021 STHQ8IWL8 128 aa7.6□□□□□ -1.19
PRPF38B-201ENST00000370021 C9orf85Q96MD7 179 aa7.6□□□□□ -1.19
PRPF38B-201ENST00000370021 SPANXA1Q9NS26 97 aa7.6□□□□□ -1.19
PRPF38B-201ENST00000370021 UBE2D4Q9Y2X8 147 aa7.59□□□□□ -1.19
PRPF38B-201ENST00000370021 IGHV4-30-2A0A087WSY4 118 aa7.58□□□□□ -1.2
PRPF38B-201ENST00000370021 TRGV4A0A0C4DH28 118 aa7.58□□□□□ -1.2
PRPF38B-201ENST00000370021 J3KT08 172 aa7.58□□□□□ -1.2
PRPF38B-201ENST00000370021 ACYP1P07311 99 aa7.58□□□□□ -1.2
PRPF38B-201ENST00000370021 MALP21145 153 aa7.58□□□□□ -1.2
PRPF38B-201ENST00000370021 FAM19A5Q7Z5A7 132 aaPredicted RBP7.58□□□□□ -1.2
PRPF38B-201ENST00000370021 SMCR5Q8TEV8 140 aa7.58□□□□□ -1.2
PRPF38B-201ENST00000370021 CITED2Q99967 270 aaPredicted RBP7.58□□□□□ -1.2
PRPF38B-201ENST00000370021 C11orf71Q6IPW1 123 aa7.58□□□□□ -1.2
PRPF38B-201ENST00000370021 C18orf65Q6ZTR6 163 aa7.58□□□□□ -1.2
PRPF38B-201ENST00000370021 HRNRQ86YZ3 2850 aaPredicted RBP7.58□□□□□ -1.2
PRPF38B-201ENST00000370021 NBEAL2Q6ZNJ1 2754 aa7.58□□□□□ -1.2
PRPF38B-201ENST00000370021 GNLYP22749 145 aa7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 NOP10Q9NPE3 64 aaKnown RBP7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 ZANQ9Y493 2812 aa7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 K7EQG2 157 aa7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 HAMPP81172 84 aa7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 FAM218AQ96MZ4 157 aa7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 LITAFQ99732 161 aa7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 SPANXDQ9BXN6 97 aa7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 SPANXCQ9NY87 97 aa7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 CHD6Q8TD26 2715 aa7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 C19orf84I3L1E1 186 aa7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 DEFB130BP0DP73 79 aa7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 DEFB130AP0DP74 79 aa7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 KIR2DL5BQ8NHK3 375 aa7.57□□□□□ -1.2
PRPF38B-201ENST00000370021 MSMBP08118 114 aa7.56□□□□□ -1.2
PRPF38B-201ENST00000370021 RBMY1A1P0DJD3 496 aaKnown RBP7.56□□□□□ -1.2
PRPF38B-201ENST00000370021 RBMY1CP0DJD4 496 aa7.56□□□□□ -1.2
PRPF38B-201ENST00000370021 RBMY1FQ15415 496 aaKnown RBP7.56□□□□□ -1.2
PRPF38B-201ENST00000370021 ANKRD17O75179 2603 aaKnown RBP7.56□□□□□ -1.2
PRPF38B-201ENST00000370021 RBMY1BA6NDE4 496 aaKnown RBP7.56□□□□□ -1.2
PRPF38B-201ENST00000370021 RBMY1EA6NEQ0 496 aaKnown RBP7.56□□□□□ -1.2
PRPF38B-201ENST00000370021 RBMY1DP0C7P1 496 aaKnown RBP7.56□□□□□ -1.2
PRPF38B-201ENST00000370021 XCL1P47992 114 aa7.56□□□□□ -1.2
PRPF38B-201ENST00000370021 C10orf105Q8TEF2 133 aa7.56□□□□□ -1.2
PRPF38B-201ENST00000370021 SOSTDC1Q6X4U4 206 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms