RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 XCL2Q9UBD3 114 aa3.68□□□□□ -1.82
UBE3D-202ENST00000369746 TIMM8BQ9Y5J9 83 aaPredicted RBP3.68□□□□□ -1.82
UBE3D-202ENST00000369746 SPENQ96T58 3664 aaKnown RBP3.68□□□□□ -1.82
UBE3D-202ENST00000369746 C17orf98A8MV24 154 aa3.67□□□□□ -1.82
UBE3D-202ENST00000369746 IGKV1-16P04430 117 aa3.67□□□□□ -1.82
UBE3D-202ENST00000369746 CCKP06307 115 aa3.67□□□□□ -1.82
UBE3D-202ENST00000369746 PRB4P10163 310 aaPredicted RBP3.67□□□□□ -1.82
UBE3D-202ENST00000369746 CD24P25063 80 aa3.67□□□□□ -1.82
UBE3D-202ENST00000369746 XCL1P47992 114 aa3.67□□□□□ -1.82
UBE3D-202ENST00000369746 HOXA4Q00056 320 aaPredicted RBP3.67□□□□□ -1.82
UBE3D-202ENST00000369746 C2orf83Q53S99 150 aa3.67□□□□□ -1.82
UBE3D-202ENST00000369746 LINC00322Q6ZN03 302 aaPredicted RBP3.67□□□□□ -1.82
UBE3D-202ENST00000369746 FLNAP21333 2647 aaKnown RBP3.67□□□□□ -1.82
UBE3D-202ENST00000369746 IGHV4-61A0A0C4DH41 118 aa3.67□□□□□ -1.82
UBE3D-202ENST00000369746 IQCF6A8MYZ5 107 aa3.67□□□□□ -1.82
UBE3D-202ENST00000369746 KIAA0087Q14695 138 aa3.67□□□□□ -1.82
UBE3D-202ENST00000369746 LYPD1Q8N2G4 141 aa3.67□□□□□ -1.82
UBE3D-202ENST00000369746 PRRC2CQ9Y520 2896 aaKnown RBP3.67□□□□□ -1.82
UBE3D-202ENST00000369746 TRAV7A0A075B6U4 112 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 IGHV3OR16-9A0A0B4J2B5 98 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 E7EQL1 145 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 NXPH4O95158 308 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 IGHV3-13P01766 116 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 PROK1P58294 105 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 NKAPP1Q8N9T2 125 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 TMEM14CQ9P0S9 112 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 UBE2D4Q9Y2X8 147 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 ICOSQ9Y6W8 199 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 CENPEQ02224 2701 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 ADGRG4Q8IZF6 3080 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 TRAV13-2A0A0B4J235 113 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 C11orf86A6NJI1 115 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 PLGLAQ15195 96 aa3.66□□□□□ -1.82
UBE3D-202ENST00000369746 JMJD1CQ15652 2540 aa3.65□□□□□ -1.82
UBE3D-202ENST00000369746 PSPHP1O15172 72 aa3.65□□□□□ -1.82
UBE3D-202ENST00000369746 BSPH1Q075Z2 132 aa3.65□□□□□ -1.82
UBE3D-202ENST00000369746 C10orf113Q5VZT2 155 aa3.65□□□□□ -1.82
UBE3D-202ENST00000369746 CELA1Q9UNI1 258 aa3.65□□□□□ -1.82
UBE3D-202ENST00000369746 MXRA5Q9NR99 2828 aa3.65□□□□□ -1.82
UBE3D-202ENST00000369746 CELSR3Q9NYQ7 3312 aa3.65□□□□□ -1.82
UBE3D-202ENST00000369746 IGHV3-20A0A0C4DH32 117 aa3.65□□□□□ -1.83
UBE3D-202ENST00000369746 DNAJC9-AS1A6NH13 148 aa3.65□□□□□ -1.83
UBE3D-202ENST00000369746 ERC2-IT1O76042 136 aa3.65□□□□□ -1.83
UBE3D-202ENST00000369746 CLPSP04118 112 aa3.65□□□□□ -1.83
UBE3D-202ENST00000369746 ZNF876PQ49A33 203 aa3.65□□□□□ -1.83
UBE3D-202ENST00000369746 LINC01554Q52M75 96 aa3.65□□□□□ -1.83
UBE3D-202ENST00000369746 SOSTDC1Q6X4U4 206 aa3.65□□□□□ -1.83
UBE3D-202ENST00000369746 ZNF826PQ6ZT77 177 aa3.65□□□□□ -1.83
UBE3D-202ENST00000369746 PHF5AQ7RTV0 110 aaKnown RBP3.65□□□□□ -1.83
UBE3D-202ENST00000369746 TMEM61Q8N0U2 210 aa3.65□□□□□ -1.83
UBE3D-202ENST00000369746 TMEM14BQ9NUH8 114 aa3.65□□□□□ -1.83
UBE3D-202ENST00000369746 INTS1Q8N201 2190 aaKnown RBP3.65□□□□□ -1.83
UBE3D-202ENST00000369746 USF3Q68DE3 2245 aa3.65□□□□□ -1.83
UBE3D-202ENST00000369746 COL6A5A8TX70 2615 aa3.65□□□□□ -1.83
UBE3D-202ENST00000369746 IGLV1-44P01699 117 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 RNASE2P10153 161 aaKnown RBP3.64□□□□□ -1.83
UBE3D-202ENST00000369746 RHOHQ15669 191 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 DEFB134Q4QY38 66 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 MPLKIPQ8TAP9 179 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 MEGF8Q7Z7M0 2845 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 A0A0J9YXY3 114 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 IGLV2-11P01706 119 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 FAM27BQ5VT28 67 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 LYPD5Q6UWN5 251 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 DYNAPQ8N1N2 210 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 MUC7Q8TAX7 377 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 AMELXQ99217 191 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 SND1-IT1Q9HBX3 110 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 CCDC168Q8NDH2 2452 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 WDFY3Q8IZQ1 3526 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 ABCA4P78363 2273 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 IGHV3OR16-13A0A075B7E8 117 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 IGHV3OR16-10A0A075B7F0 116 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 NDUFA3O95167 84 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 FUSP35637 526 aaKnown RBP eCLIP3.64□□□□□ -1.83
UBE3D-202ENST00000369746 UBE2BP63146 152 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 Q1T7F1 81 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 Q6YL49 198 aa3.64□□□□□ -1.83
UBE3D-202ENST00000369746 DNAH3Q8TD57 4116 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 Q1RN00 199 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 LYZL1Q6UWQ5 148 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 VMO1Q7Z5L0 202 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 GGNQ86UU5 652 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 ZNF575Q86XF7 245 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 ZNF524Q96C55 264 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 MSRB1Q9NZV6 116 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 FAM223BA6NKX1 122 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 LEPROTO15243 131 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 PPP1R17O96001 155 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 PRCDQ00LT1 54 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 SFTA2Q6UW10 78 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 OBSCN-AS1Q96MR7 158 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 SCGB3A1Q96QR1 104 aa3.63□□□□□ -1.83
UBE3D-202ENST00000369746 OPRPNQ99935 248 aaPredicted RBP3.63□□□□□ -1.83
UBE3D-202ENST00000369746 NACAE9PAV3 2078 aa3.62□□□□□ -1.83
UBE3D-202ENST00000369746 C7orf65Q6ZTY9 151 aa3.62□□□□□ -1.83
UBE3D-202ENST00000369746 DYNLRB2Q8TF09 96 aa3.62□□□□□ -1.83
UBE3D-202ENST00000369746 TMEM141Q96I45 108 aa3.62□□□□□ -1.83
UBE3D-202ENST00000369746 BPESC1Q9GZL8 116 aa3.62□□□□□ -1.83
UBE3D-202ENST00000369746 ACANP16112 2415 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms