RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 TRAV13-2A0A0B4J235 113 aa11.67□□□□□ -0.54
CHD1L-203ENST00000369259 K7EQG2 157 aa11.67□□□□□ -0.54
CHD1L-203ENST00000369259 USP17L23D6RBM5 183 aa11.66□□□□□ -0.54
CHD1L-203ENST00000369259 LMO4P61968 165 aa11.66□□□□□ -0.54
CHD1L-203ENST00000369259 PIK3CD-AS1Q5SR53 167 aa11.66□□□□□ -0.54
CHD1L-203ENST00000369259 LINC01561Q8N1V8 128 aa11.66□□□□□ -0.54
CHD1L-203ENST00000369259 IGLV1-40P01703 118 aa11.65□□□□□ -0.54
CHD1L-203ENST00000369259 RBMY1A1P0DJD3 496 aaKnown RBP11.65□□□□□ -0.54
CHD1L-203ENST00000369259 RBMY1CP0DJD4 496 aa11.65□□□□□ -0.54
CHD1L-203ENST00000369259 RBMY1FQ15415 496 aaKnown RBP11.65□□□□□ -0.54
CHD1L-203ENST00000369259 LY6EQ16553 131 aa11.65□□□□□ -0.54
CHD1L-203ENST00000369259 C4orf26Q17RF5 130 aa11.65□□□□□ -0.54
CHD1L-203ENST00000369259 C9orf129Q5T035 196 aaKnown RBP11.65□□□□□ -0.54
CHD1L-203ENST00000369259 OBSCN-AS1Q96MR7 158 aa11.65□□□□□ -0.54
CHD1L-203ENST00000369259 SYNJ2BPP57105 145 aa11.64□□□□□ -0.55
CHD1L-203ENST00000369259 ATMQ13315 3056 aa11.64□□□□□ -0.55
CHD1L-203ENST00000369259 CRPP02741 224 aa11.64□□□□□ -0.55
CHD1L-203ENST00000369259 GVINP1Q7Z2Y8 2422 aa11.64□□□□□ -0.55
CHD1L-203ENST00000369259 CDSNQ15517 529 aa11.63□□□□□ -0.55
CHD1L-203ENST00000369259 Q5XG85 94 aa11.63□□□□□ -0.55
CHD1L-203ENST00000369259 FAM19A3Q7Z5A8 133 aa11.63□□□□□ -0.55
CHD1L-203ENST00000369259 SPTBN1Q01082 2364 aaKnown RBP11.63□□□□□ -0.55
CHD1L-203ENST00000369259 RELNP78509 3460 aa11.63□□□□□ -0.55
CHD1L-203ENST00000369259 A0A087WYN8 130 aa11.63□□□□□ -0.55
CHD1L-203ENST00000369259 BRD3OSQ6XYD6 125 aa11.63□□□□□ -0.55
CHD1L-203ENST00000369259 CCL21O00585 134 aa11.62□□□□□ -0.55
CHD1L-203ENST00000369259 BLCAPP62952 87 aa11.62□□□□□ -0.55
CHD1L-203ENST00000369259 HRCT1Q6UXD1 115 aa11.62□□□□□ -0.55
CHD1L-203ENST00000369259 OTOGLQ3ZCN5 2332 aa11.61□□□□□ -0.55
CHD1L-203ENST00000369259 DOPEY2Q9Y3R5 2298 aa11.61□□□□□ -0.55
CHD1L-203ENST00000369259 F5H768 121 aa11.61□□□□□ -0.55
CHD1L-203ENST00000369259 IGHV3-53P01767 116 aa11.61□□□□□ -0.55
CHD1L-203ENST00000369259 LINC00337Q8N6G1 96 aa11.61□□□□□ -0.55
CHD1L-203ENST00000369259 BPESC1Q9GZL8 116 aa11.61□□□□□ -0.55
CHD1L-203ENST00000369259 PIMREGQ9BSJ6 248 aa11.61□□□□□ -0.55
CHD1L-203ENST00000369259 H0YGX0 51 aa11.59□□□□□ -0.55
CHD1L-203ENST00000369259 PRM2P04554 102 aa11.59□□□□□ -0.55
CHD1L-203ENST00000369259 SMIM11BQ8TCY0 68 aa11.59□□□□□ -0.55
CHD1L-203ENST00000369259 HRNRQ86YZ3 2850 aaPredicted RBP11.59□□□□□ -0.55
CHD1L-203ENST00000369259 IGKV2-28A0A075B6P5 120 aa11.59□□□□□ -0.55
CHD1L-203ENST00000369259 A6NDX4 124 aa11.59□□□□□ -0.55
CHD1L-203ENST00000369259 IGKV2D-28P01615 120 aa11.59□□□□□ -0.55
CHD1L-203ENST00000369259 CFHR3Q02985 330 aa11.59□□□□□ -0.55
CHD1L-203ENST00000369259 H3BUX3 64 aa11.58□□□□□ -0.56
CHD1L-203ENST00000369259 FHL2Q14192 279 aa11.57□□□□□ -0.56
CHD1L-203ENST00000369259 SND1-IT1Q9HBX3 110 aa11.57□□□□□ -0.56
CHD1L-203ENST00000369259 A0A1W2PPR1 153 aa11.56□□□□□ -0.56
CHD1L-203ENST00000369259 NDUFC2-KCTD14E9PQ53 114 aa11.56□□□□□ -0.56
CHD1L-203ENST00000369259 NCR3O14931 201 aa11.56□□□□□ -0.56
CHD1L-203ENST00000369259 ASH1LQ9NR48 2969 aaKnown RBP11.56□□□□□ -0.56
CHD1L-203ENST00000369259 COL6A6A6NMZ7 2263 aa11.56□□□□□ -0.56
CHD1L-203ENST00000369259 NDUFC2O95298 119 aa11.55□□□□□ -0.56
CHD1L-203ENST00000369259 MIR7-3HGQ8N6C7 128 aa11.55□□□□□ -0.56
CHD1L-203ENST00000369259 AKAP13Q12802 2813 aa11.55□□□□□ -0.56
CHD1L-203ENST00000369259 LECT2O14960 151 aa11.55□□□□□ -0.56
CHD1L-203ENST00000369259 ZFHX3Q15911 3703 aa11.55□□□□□ -0.56
CHD1L-203ENST00000369259 PTPRZ1P23471 2315 aaPredicted RBP11.54□□□□□ -0.56
CHD1L-203ENST00000369259 ADORA2A-AS1P86434 159 aa11.54□□□□□ -0.56
CHD1L-203ENST00000369259 C10orf105Q8TEF2 133 aa11.54□□□□□ -0.56
CHD1L-203ENST00000369259 GHRHP01286 108 aa11.53□□□□□ -0.56
CHD1L-203ENST00000369259 MRAPQ8TCY5 172 aa11.53□□□□□ -0.56
CHD1L-203ENST00000369259 Q96MF0 132 aa11.53□□□□□ -0.56
CHD1L-203ENST00000369259 SORL1Q92673 2214 aa11.53□□□□□ -0.56
CHD1L-203ENST00000369259 K7ENP7 123 aa11.53□□□□□ -0.56
CHD1L-203ENST00000369259 PSMB8P28062 276 aa11.53□□□□□ -0.56
CHD1L-203ENST00000369259 CCKP06307 115 aa11.52□□□□□ -0.57
CHD1L-203ENST00000369259 IGHV4-38-2P0DP08 117 aa11.52□□□□□ -0.57
CHD1L-203ENST00000369259 HILS1P60008 231 aa11.52□□□□□ -0.57
CHD1L-203ENST00000369259 S100A7L2Q5SY68 101 aa11.52□□□□□ -0.57
CHD1L-203ENST00000369259 C11orf72Q8NBR9 251 aa11.51□□□□□ -0.57
CHD1L-203ENST00000369259 CDC42SE2Q9NRR3 84 aa11.51□□□□□ -0.57
CHD1L-203ENST00000369259 RBMY1BA6NDE4 496 aaKnown RBP11.5□□□□□ -0.57
CHD1L-203ENST00000369259 RBMY1EA6NEQ0 496 aaKnown RBP11.5□□□□□ -0.57
CHD1L-203ENST00000369259 SLPIP03973 132 aa11.5□□□□□ -0.57
CHD1L-203ENST00000369259 RBMY1DP0C7P1 496 aaKnown RBP11.5□□□□□ -0.57
CHD1L-203ENST00000369259 RPL36AP83881 106 aaKnown RBP11.5□□□□□ -0.57
CHD1L-203ENST00000369259 ATP5EP2Q5VTU8 51 aa11.5□□□□□ -0.57
CHD1L-203ENST00000369259 RPL36ALQ969Q0 106 aaKnown RBP11.5□□□□□ -0.57
CHD1L-203ENST00000369259 A8MTW9 85 aa11.49□□□□□ -0.57
CHD1L-203ENST00000369259 DEFB131AP59861 70 aa11.49□□□□□ -0.57
CHD1L-203ENST00000369259 COX7B2Q8TF08 81 aa11.49□□□□□ -0.57
CHD1L-203ENST00000369259 TLN1Q9Y490 2541 aaKnown RBP11.49□□□□□ -0.57
CHD1L-203ENST00000369259 TMEM243Q9BU79 118 aa11.49□□□□□ -0.57
CHD1L-203ENST00000369259 ORMDL1Q9P0S3 153 aa11.49□□□□□ -0.57
CHD1L-203ENST00000369259 TRAV23DV6A0A075B6W5 121 aa11.48□□□□□ -0.57
CHD1L-203ENST00000369259 CCL18P55774 89 aa11.48□□□□□ -0.57
CHD1L-203ENST00000369259 LINC00158P58513 81 aa11.48□□□□□ -0.57
CHD1L-203ENST00000369259 SS18Q15532 418 aa11.48□□□□□ -0.57
CHD1L-203ENST00000369259 C10orf99Q6UWK7 81 aa11.48□□□□□ -0.57
CHD1L-203ENST00000369259 NTM-AS1Q6ZSK4 140 aa11.48□□□□□ -0.57
CHD1L-203ENST00000369259 SPTAN1Q13813 2472 aaKnown RBP11.47□□□□□ -0.57
CHD1L-203ENST00000369259 TMEM89A2RUT3 159 aa11.47□□□□□ -0.57
CHD1L-203ENST00000369259 WFDC9Q8NEX5 89 aa11.47□□□□□ -0.57
CHD1L-203ENST00000369259 FAM236DA0A1B0GTK5 79 aa11.46□□□□□ -0.57
CHD1L-203ENST00000369259 FAM236CP0DP71 79 aa11.46□□□□□ -0.57
CHD1L-203ENST00000369259 C20orf197Q8N268 126 aa11.46□□□□□ -0.57
CHD1L-203ENST00000369259 FAM19A1Q7Z5A9 133 aa11.46□□□□□ -0.58
CHD1L-203ENST00000369259 TOMM7Q9P0U1 55 aa11.46□□□□□ -0.58
CHD1L-203ENST00000369259 PFN2P35080 140 aa11.45□□□□□ -0.58
CHD1L-203ENST00000369259 LYPD5Q6UWN5 251 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms