RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ATP5LO75964 103 aa6.17□□□□□ -1.42
TPM3-213ENST00000368545 MIFP14174 115 aa6.17□□□□□ -1.42
TPM3-213ENST00000368545 RHOHQ15669 191 aa6.17□□□□□ -1.42
TPM3-213ENST00000368545 LINC00173Q6ZV60 143 aa6.17□□□□□ -1.42
TPM3-213ENST00000368545 Q8N976 141 aa6.17□□□□□ -1.42
TPM3-213ENST00000368545 TOMM6Q96B49 74 aa6.17□□□□□ -1.42
TPM3-213ENST00000368545 FAM218AQ96MZ4 157 aa6.17□□□□□ -1.42
TPM3-213ENST00000368545 C18orf15Q96N68 181 aa6.17□□□□□ -1.42
TPM3-213ENST00000368545 LYRM9A8MSI8 78 aa6.17□□□□□ -1.42
TPM3-213ENST00000368545 I3L3M4 83 aa6.17□□□□□ -1.42
TPM3-213ENST00000368545 RPL36ALQ969Q0 106 aaKnown RBP6.17□□□□□ -1.42
TPM3-213ENST00000368545 K7EQD1 137 aa6.16□□□□□ -1.42
TPM3-213ENST00000368545 KRTAP10-2P60368 255 aa6.16□□□□□ -1.42
TPM3-213ENST00000368545 XP32Q5T750 250 aa6.16□□□□□ -1.42
TPM3-213ENST00000368545 LINC01545Q5VT33 79 aa6.16□□□□□ -1.42
TPM3-213ENST00000368545 LINC00612Q8N6U2 182 aa6.16□□□□□ -1.42
TPM3-213ENST00000368545 OR11H2Q8NH07 326 aa6.16□□□□□ -1.42
TPM3-213ENST00000368545 LGALS9CQ6DKI2 356 aa6.16□□□□□ -1.42
TPM3-213ENST00000368545 C2orf66Q6UXQ4 117 aa6.16□□□□□ -1.42
TPM3-213ENST00000368545 VAMP8Q9BV40 100 aa6.16□□□□□ -1.42
TPM3-213ENST00000368545 CYSLTR1Q9Y271 337 aa6.16□□□□□ -1.42
TPM3-213ENST00000368545 TP53TG1Q9Y2A0 90 aa6.16□□□□□ -1.42
TPM3-213ENST00000368545 TSTD3H0UI37 97 aa6.15□□□□□ -1.42
TPM3-213ENST00000368545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.15□□□□□ -1.42
TPM3-213ENST00000368545 EMP1P54849 157 aa6.15□□□□□ -1.42
TPM3-213ENST00000368545 XGP55808 180 aa6.15□□□□□ -1.42
TPM3-213ENST00000368545 PKIAP61925 76 aa6.15□□□□□ -1.42
TPM3-213ENST00000368545 ZFAND6Q6FIF0 208 aa6.15□□□□□ -1.42
TPM3-213ENST00000368545 NEGR1Q7Z3B1 354 aa6.15□□□□□ -1.42
TPM3-213ENST00000368545 DNAH3Q8TD57 4116 aa6.14□□□□□ -1.43
TPM3-213ENST00000368545 TRBV6-4A0A1B0GX49 114 aa6.14□□□□□ -1.43
TPM3-213ENST00000368545 P0DMU3 169 aa6.14□□□□□ -1.43
TPM3-213ENST00000368545 FAM231AP0DMU4 169 aa6.14□□□□□ -1.43
TPM3-213ENST00000368545 FAM231CP0DMU5 169 aa6.14□□□□□ -1.43
TPM3-213ENST00000368545 RPL36AP83881 106 aaKnown RBP6.14□□□□□ -1.43
TPM3-213ENST00000368545 Q8NAQ8 132 aa6.14□□□□□ -1.43
TPM3-213ENST00000368545 TRBV7-3A0A075B6L6 115 aa6.14□□□□□ -1.43
TPM3-213ENST00000368545 TRGV4A0A0C4DH28 118 aa6.14□□□□□ -1.43
TPM3-213ENST00000368545 TEX48A0A1B0GUV7 120 aa6.14□□□□□ -1.43
TPM3-213ENST00000368545 Q6ZN92 141 aa6.14□□□□□ -1.43
TPM3-213ENST00000368545 SCGB3A1Q96QR1 104 aa6.14□□□□□ -1.43
TPM3-213ENST00000368545 PRSS1P07477 247 aa6.13□□□□□ -1.43
TPM3-213ENST00000368545 FAM222AQ5U5X8 452 aa6.13□□□□□ -1.43
TPM3-213ENST00000368545 LINC00336Q6ZUF6 198 aa6.13□□□□□ -1.43
TPM3-213ENST00000368545 DAZ4Q86SG3 579 aaKnown RBP6.13□□□□□ -1.43
TPM3-213ENST00000368545 ZNF664Q8N3J9 261 aa6.13□□□□□ -1.43
TPM3-213ENST00000368545 SLC25A29Q8N8R3 303 aa6.13□□□□□ -1.43
TPM3-213ENST00000368545 TIMM17AQ99595 171 aa6.13□□□□□ -1.43
TPM3-213ENST00000368545 DAZ3Q9NR90 486 aaKnown RBP6.13□□□□□ -1.43
TPM3-213ENST00000368545 TRAV9-2A0A087WT02 112 aa6.13□□□□□ -1.43
TPM3-213ENST00000368545 DEFB130BP0DP73 79 aa6.13□□□□□ -1.43
TPM3-213ENST00000368545 DEFB130AP0DP74 79 aa6.13□□□□□ -1.43
TPM3-213ENST00000368545 TMEM141Q96I45 108 aa6.13□□□□□ -1.43
TPM3-213ENST00000368545 PRADC1Q9BSG0 188 aa6.13□□□□□ -1.43
TPM3-213ENST00000368545 TRAV12-1A0A0B4J245 112 aa6.12□□□□□ -1.43
TPM3-213ENST00000368545 C20orf203Q8NBC4 194 aa6.12□□□□□ -1.43
TPM3-213ENST00000368545 ZNRF2Q8NHG8 242 aa6.12□□□□□ -1.43
TPM3-213ENST00000368545 TM2D3Q9BRN9 247 aa6.12□□□□□ -1.43
TPM3-213ENST00000368545 SPART-AS1P0CW21 52 aa6.11□□□□□ -1.43
TPM3-213ENST00000368545 SPATA45Q537H7 98 aa6.11□□□□□ -1.43
TPM3-213ENST00000368545 ATOH7Q8N100 152 aa6.11□□□□□ -1.43
TPM3-213ENST00000368545 IGIPA6NJ69 53 aa6.11□□□□□ -1.43
TPM3-213ENST00000368545 UBE2D3P61077 147 aa6.11□□□□□ -1.43
TPM3-213ENST00000368545 DAD1P61803 113 aa6.11□□□□□ -1.43
TPM3-213ENST00000368545 UBE2D2P62837 147 aa6.11□□□□□ -1.43
TPM3-213ENST00000368545 BAALCQ8WXS3 180 aa6.11□□□□□ -1.43
TPM3-213ENST00000368545 A0A087WX48 190 aa6.1□□□□□ -1.43
TPM3-213ENST00000368545 PLNP26678 52 aa6.1□□□□□ -1.43
TPM3-213ENST00000368545 RPL39P62891 51 aaKnown RBP6.1□□□□□ -1.43
TPM3-213ENST00000368545 Q9UF83 564 aa6.1□□□□□ -1.43
TPM3-213ENST00000368545 HHLA3Q9XRX5 114 aa6.1□□□□□ -1.43
TPM3-213ENST00000368545 F8VRH5 84 aa6.1□□□□□ -1.43
TPM3-213ENST00000368545 SMAGPQ0VAQ4 97 aa6.1□□□□□ -1.43
TPM3-213ENST00000368545 PMCHL2Q9BQD1 86 aa6.1□□□□□ -1.43
TPM3-213ENST00000368545 GTSF1LQ9H1H1 148 aa6.1□□□□□ -1.43
TPM3-213ENST00000368545 PRO1933Q9H354 126 aa6.1□□□□□ -1.43
TPM3-213ENST00000368545 C11orf68Q9H3H3 251 aaKnown RBP6.1□□□□□ -1.43
TPM3-213ENST00000368545 SPANXA1Q9NS26 97 aa6.1□□□□□ -1.43
TPM3-213ENST00000368545 PRO0255Q9UI72 69 aa6.1□□□□□ -1.43
TPM3-213ENST00000368545 PYGO1Q9Y3Y4 419 aa6.1□□□□□ -1.43
TPM3-213ENST00000368545 DPM2O94777 84 aa6.09□□□□□ -1.43
TPM3-213ENST00000368545 IGKCP01834 107 aa6.09□□□□□ -1.43
TPM3-213ENST00000368545 LINC00694P0DN24 101 aa6.09□□□□□ -1.43
TPM3-213ENST00000368545 CRYBA4P53673 196 aa6.09□□□□□ -1.43
TPM3-213ENST00000368545 TMEM97Q5BJF2 176 aa6.09□□□□□ -1.43
TPM3-213ENST00000368545 NFE4Q86UQ8 179 aa6.09□□□□□ -1.43
TPM3-213ENST00000368545 DEFB104AQ8WTQ1 72 aa6.09□□□□□ -1.43
TPM3-213ENST00000368545 CHCHD7Q9BUK0 85 aa6.09□□□□□ -1.43
TPM3-213ENST00000368545 IGHV3-38A0A0C4DH36 116 aa6.08□□□□□ -1.44
TPM3-213ENST00000368545 DEFB4AO15263 64 aa6.08□□□□□ -1.44
TPM3-213ENST00000368545 ATP5G1P05496 136 aa6.08□□□□□ -1.44
TPM3-213ENST00000368545 DDTP30046 118 aa6.08□□□□□ -1.44
TPM3-213ENST00000368545 PMVKQ15126 192 aa6.08□□□□□ -1.44
TPM3-213ENST00000368545 C6orf226Q5I0X4 101 aa6.08□□□□□ -1.44
TPM3-213ENST00000368545 CELA1Q9UNI1 258 aa6.08□□□□□ -1.44
TPM3-213ENST00000368545 DLEU1O43261 78 aa6.08□□□□□ -1.44
TPM3-213ENST00000368545 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
TPM3-213ENST00000368545 Q9HAA7 133 aa6.08□□□□□ -1.44
TPM3-213ENST00000368545 MRPL35Q9NZE8 188 aaKnown RBP6.08□□□□□ -1.44
TPM3-213ENST00000368545 TENM2Q9NT68 2774 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms