RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 TIMM17AQ99595 171 aa7.85□□□□□ -1.15
CSNK1E-202ENST00000366216 TEX48A0A1B0GUV7 120 aa7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 IGIPA6NJ69 53 aa7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 TSTD3H0UI37 97 aa7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 H0Y8G0 127 aa7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 PRSS1P07477 247 aa7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 DEFB130BP0DP73 79 aa7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 DEFB130AP0DP74 79 aa7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 UBE2D3P61077 147 aa7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 UBE2D2P62837 147 aa7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 COTL1Q14019 142 aa7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 ANKRD39Q53RE8 183 aa7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 Q6ZN92 141 aa7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 DAZ4Q86SG3 579 aaKnown RBP7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 ZNRF2Q8NHG8 242 aa7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 PRADC1Q9BSG0 188 aa7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 DAZ3Q9NR90 486 aaKnown RBP7.84□□□□□ -1.15
CSNK1E-202ENST00000366216 SRRM2Q9UQ35 2752 aaKnown RBP7.83□□□□□ -1.16
CSNK1E-202ENST00000366216 A0A087WX48 190 aa7.83□□□□□ -1.16
CSNK1E-202ENST00000366216 ODF1Q14990 250 aa7.83□□□□□ -1.16
CSNK1E-202ENST00000366216 PAM16Q9Y3D7 125 aa7.83□□□□□ -1.16
CSNK1E-202ENST00000366216 PCP4L1A6NKN8 68 aa7.82□□□□□ -1.16
CSNK1E-202ENST00000366216 C16orf90A8MZG2 172 aa7.82□□□□□ -1.16
CSNK1E-202ENST00000366216 DEFB4AO15263 64 aa7.82□□□□□ -1.16
CSNK1E-202ENST00000366216 NPSP0C0P6 89 aa7.82□□□□□ -1.16
CSNK1E-202ENST00000366216 SPART-AS1P0CW21 52 aa7.82□□□□□ -1.16
CSNK1E-202ENST00000366216 RPL39P62891 51 aaKnown RBP7.82□□□□□ -1.16
CSNK1E-202ENST00000366216 SPATA45Q537H7 98 aa7.82□□□□□ -1.16
CSNK1E-202ENST00000366216 ATOH7Q8N100 152 aa7.82□□□□□ -1.16
CSNK1E-202ENST00000366216 CHCHD7Q9BUK0 85 aa7.82□□□□□ -1.16
CSNK1E-202ENST00000366216 PRO1933Q9H354 126 aa7.82□□□□□ -1.16
CSNK1E-202ENST00000366216 HHLA3Q9XRX5 114 aa7.82□□□□□ -1.16
CSNK1E-202ENST00000366216 PYGO1Q9Y3Y4 419 aa7.82□□□□□ -1.16
CSNK1E-202ENST00000366216 GAGE12JA6NER3 117 aa7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 HSBP1L1C9JCN9 74 aa7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 LINC00694P0DN24 101 aa7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 LORP23490 312 aaPredicted RBP7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 DAD1P61803 113 aa7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 GAGE1Q13065 139 aa7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 GAGE4Q13068 117 aa7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 GAGE5Q13069 117 aa7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 GAGE13Q4V321 117 aa7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 DEFB104AQ8WTQ1 72 aa7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 BAALCQ8WXS3 180 aa7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 PMCHL2Q9BQD1 86 aa7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 GTSF1LQ9H1H1 148 aa7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 PRO0255Q9UI72 69 aa7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 FAT1Q14517 4588 aa7.81□□□□□ -1.16
CSNK1E-202ENST00000366216 IGHV3-38A0A0C4DH36 116 aa7.8□□□□□ -1.16
CSNK1E-202ENST00000366216 DPM2O94777 84 aa7.8□□□□□ -1.16
CSNK1E-202ENST00000366216 CRYBA4P53673 196 aa7.8□□□□□ -1.16
CSNK1E-202ENST00000366216 CELA1Q9UNI1 258 aa7.8□□□□□ -1.16
CSNK1E-202ENST00000366216 F8VRH5 84 aa7.79□□□□□ -1.16
CSNK1E-202ENST00000366216 IGKCP01834 107 aa7.79□□□□□ -1.16
CSNK1E-202ENST00000366216 ATP5G1P05496 136 aa7.79□□□□□ -1.16
CSNK1E-202ENST00000366216 PLNP26678 52 aa7.79□□□□□ -1.16
CSNK1E-202ENST00000366216 PMVKQ15126 192 aa7.79□□□□□ -1.16
CSNK1E-202ENST00000366216 MAJINQ3KP22 176 aa7.79□□□□□ -1.16
CSNK1E-202ENST00000366216 TMEM97Q5BJF2 176 aa7.79□□□□□ -1.16
CSNK1E-202ENST00000366216 PAPPA-AS1Q5QFB9 102 aa7.79□□□□□ -1.16
CSNK1E-202ENST00000366216 TIMM21Q9BVV7 248 aa7.79□□□□□ -1.16
CSNK1E-202ENST00000366216 SPANXA1Q9NS26 97 aa7.79□□□□□ -1.16
CSNK1E-202ENST00000366216 MRPL35Q9NZE8 188 aaKnown RBP7.79□□□□□ -1.16
CSNK1E-202ENST00000366216 CHTOPQ9Y3Y2 248 aaKnown RBP7.79□□□□□ -1.16
CSNK1E-202ENST00000366216 FLG2Q5D862 2391 aaPredicted RBP7.79□□□□□ -1.16
CSNK1E-202ENST00000366216 MYCBP2O75592 4640 aa7.78□□□□□ -1.16
CSNK1E-202ENST00000366216 TRAV10A0A0B4J240 114 aa7.78□□□□□ -1.16
CSNK1E-202ENST00000366216 LOC100131303A0A0U1RQF7 123 aa7.78□□□□□ -1.16
CSNK1E-202ENST00000366216 hDV102S1A0JD36 115 aa7.78□□□□□ -1.16
CSNK1E-202ENST00000366216 DDTP30046 118 aa7.78□□□□□ -1.16
CSNK1E-202ENST00000366216 Q6ZR54 194 aa7.78□□□□□ -1.16
CSNK1E-202ENST00000366216 MIEN1Q9BRT3 115 aa7.78□□□□□ -1.16
CSNK1E-202ENST00000366216 CST9LQ9H4G1 147 aa7.78□□□□□ -1.16
CSNK1E-202ENST00000366216 UBE2D4Q9Y2X8 147 aa7.78□□□□□ -1.16
CSNK1E-202ENST00000366216 IGLV4-3A0A075B6K6 122 aa7.77□□□□□ -1.17
CSNK1E-202ENST00000366216 H7C423 109 aa7.77□□□□□ -1.17
CSNK1E-202ENST00000366216 PAX4O43316 350 aa7.77□□□□□ -1.17
CSNK1E-202ENST00000366216 IGLC3P0DOY3 106 aa7.77□□□□□ -1.17
CSNK1E-202ENST00000366216 SMAGPQ0VAQ4 97 aa7.77□□□□□ -1.17
CSNK1E-202ENST00000366216 NTM-AS1Q6ZSK4 140 aa7.77□□□□□ -1.17
CSNK1E-202ENST00000366216 Q6ZTC4 211 aa7.77□□□□□ -1.17
CSNK1E-202ENST00000366216 VPS13BQ7Z7G8 4022 aa7.76□□□□□ -1.17
CSNK1E-202ENST00000366216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.76□□□□□ -1.17
CSNK1E-202ENST00000366216 IGKV2-29A2NJV5 120 aaPredicted RBP7.76□□□□□ -1.17
CSNK1E-202ENST00000366216 GYPEP15421 78 aa7.76□□□□□ -1.17
CSNK1E-202ENST00000366216 MRPS36P82909 103 aaKnown RBP7.76□□□□□ -1.17
CSNK1E-202ENST00000366216 C1orf134Q5TEV5 83 aa7.76□□□□□ -1.17
CSNK1E-202ENST00000366216 MRPL52Q86TS9 123 aaKnown RBP7.76□□□□□ -1.17
CSNK1E-202ENST00000366216 FAM104AQ969W3 186 aa7.76□□□□□ -1.17
CSNK1E-202ENST00000366216 AMELXQ99217 191 aa7.76□□□□□ -1.17
CSNK1E-202ENST00000366216 VCX2Q9H322 139 aa7.76□□□□□ -1.17
CSNK1E-202ENST00000366216 UQCR10Q9UDW1 63 aa7.76□□□□□ -1.17
CSNK1E-202ENST00000366216 CSDC2Q9Y534 153 aaKnown RBP7.76□□□□□ -1.17
CSNK1E-202ENST00000366216 TRBV25-1A0A075B6N4 114 aa7.75□□□□□ -1.17
CSNK1E-202ENST00000366216 C12orf74Q32Q52 190 aa7.75□□□□□ -1.17
CSNK1E-202ENST00000366216 ATP6V0E2Q8NHE4 81 aa7.75□□□□□ -1.17
CSNK1E-202ENST00000366216 VSIG2Q96IQ7 327 aa7.75□□□□□ -1.17
CSNK1E-202ENST00000366216 TMEM243Q9BU79 118 aa7.75□□□□□ -1.17
CSNK1E-202ENST00000366216 UBR4Q5T4S7 5183 aa7.74□□□□□ -1.17
CSNK1E-202ENST00000366216 IGLV4-69A0A075B6H9 119 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms