RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 CNOT1A5YKK6 2376 aaKnown RBP-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 FRYLO94915 3013 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 PPRC1Q5VV67 1664 aaKnown RBP-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 PKD1P98161 4303 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 AKAP6Q13023 2319 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 ZNF236Q9UL36 1845 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 HECTD4Q9Y4D8 3996 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 MYO7BQ6PIF6 2116 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 GVINP1Q7Z2Y8 2422 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 ZNF815PA8K554 130 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 C10orf142B7Z368 130 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 CFDP00746 253 aaPredicted RBP-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 SCGB1A1P11684 91 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 B2MP61769 119 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 RBM3P98179 157 aaKnown RBP-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 INSL4Q14641 139 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 LELP1Q5T871 98 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 SSBP3-AS1Q7Z2R9 100 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 UBE2DNLQ8IWF7 75 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 SPRR2FQ96RM1 72 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 PSMG3Q9BT73 122 aaPredicted RBP-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 SAR1AQ9NR31 198 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 BATF3Q9NR55 127 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 RPRMQ9NS64 109 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 FAM186AA6NE01 2351 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 DAPK1P53355 1430 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 ZZEF1O43149 2961 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 ANKRD30AQ9BXX3 1397 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 PSME4Q14997 1843 aa-0.08□□□□□ -2.42
RNU4-48P-201ENST00000365559 DNAH7Q8WXX0 4024 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 SPTBN1Q01082 2364 aaKnown RBP-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 SMG1Q96Q15 3661 aaKnown RBP-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 DNAH10Q8IVF4 4471 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 DISP2A7MBM2 1401 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 TRAV1-2A0A0B4J238 106 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 FAM236AA0A1B0GUQ0 79 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 FAM236BA0A1B0GV22 79 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 FAM92AA1XBS5 289 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 A6NIN4 97 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 J3QR89 54 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 IFNA17P01571 189 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 PIRTP0C851 137 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 IGLC6P0CF74 106 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 SMIM6P0DI80 62 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 ASIPP42127 132 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 EDDM3BP56851 147 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 HIST1H1AQ02539 215 aaPredicted RBP-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 Q5VSD8 79 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 AKAP14Q86UN6 197 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 C10orf82Q8WW14 230 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 PYDC1Q8WXC3 89 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 SMIM3Q9BZL3 60 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 GSKIPQ9P0R6 139 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 PRO0255Q9UI72 69 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 DNAH11Q96DT5 4516 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 FLGP20930 4061 aaPredicted RBP-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 NBASA2RRP1 2371 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 DNAH1Q9P2D7 4330 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 USF3Q68DE3 2245 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 ARHGEF10O15013 1369 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 IBTKQ9P2D0 1353 aaPredicted RBP-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 VPS13CQ709C8 3753 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 CEP250Q9BV73 2442 aa-0.09□□□□□ -2.42
RNU4-48P-201ENST00000365559 ARAP2Q8WZ64 1704 aa-0.1□□□□□ -2.42
RNU4-48P-201ENST00000365559 PKHD1L1Q86WI1 4243 aa-0.1□□□□□ -2.42
RNU4-48P-201ENST00000365559 FOCADQ5VW36 1801 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 CEP290O15078 2479 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 PRG4Q92954 1404 aaPredicted RBP-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 PDE4DIPQ5VU43 2346 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 ANK3Q12955 4377 aaKnown RBP-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 APOC4-APOC2K7ER74 178 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 IL5P05113 134 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 MT1BP07438 61 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 MT1HL1P0DM35 61 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 PIPP12273 146 aaPredicted RBP-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 CKS1BP61024 79 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 UBE2G1P62253 170 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 DR1Q01658 176 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 C9orf116Q5BN46 136 aaPredicted RBP-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 Q6ZUT4 128 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 LZICQ8WZA0 190 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 PKHD1P08F94 4074 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 DNAH6Q9C0G6 4158 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 TMEM2Q9UHN6 1383 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 DNAH8Q96JB1 4490 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 LRRC37A2A6NM11 1700 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 PHLPP1O60346 1717 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 DNAH2Q9P225 4427 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 APC2O95996 2303 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 BTAF1O14981 1849 aa-0.1□□□□□ -2.43
RNU4-48P-201ENST00000365559 DNAH3Q8TD57 4116 aa-0.11□□□□□ -2.43
RNU4-48P-201ENST00000365559 SPTA1P02549 2419 aa-0.11□□□□□ -2.43
RNU4-48P-201ENST00000365559 DNAH9Q9NYC9 4486 aa-0.11□□□□□ -2.43
RNU4-48P-201ENST00000365559 KIF21AQ7Z4S6 1674 aa-0.11□□□□□ -2.43
RNU4-48P-201ENST00000365559 FHAD1B1AJZ9 1412 aa-0.11□□□□□ -2.43
RNU4-48P-201ENST00000365559 ZNF609O15014 1411 aa-0.11□□□□□ -2.43
RNU4-48P-201ENST00000365559 MYOM3Q5VTT5 1437 aa-0.11□□□□□ -2.43
RNU4-48P-201ENST00000365559 WNK1Q9H4A3 2382 aa-0.11□□□□□ -2.43
RNU4-48P-201ENST00000365559 VPS13DQ5THJ4 4388 aa-0.11□□□□□ -2.43
RNU4-48P-201ENST00000365559 A0A0D9SFI3 127 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms