RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 VAMP8Q9BV40 100 aa9.66□□□□□ -0.86
PDLIM5-203ENST00000359265 TIMM21Q9BVV7 248 aa9.66□□□□□ -0.86
PDLIM5-203ENST00000359265 A0A087WX48 190 aa9.65□□□□□ -0.86
PDLIM5-203ENST00000359265 H7C423 109 aa9.65□□□□□ -0.86
PDLIM5-203ENST00000359265 UBE2L6O14933 153 aa9.65□□□□□ -0.86
PDLIM5-203ENST00000359265 NANOS2P60321 138 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-203ENST00000359265 PMCHL2Q9BQD1 86 aa9.65□□□□□ -0.86
PDLIM5-203ENST00000359265 TRBV6-8A0A0A6YYG3 113 aa9.64□□□□□ -0.87
PDLIM5-203ENST00000359265 H3BNG1 76 aa9.64□□□□□ -0.87
PDLIM5-203ENST00000359265 PMVKQ15126 192 aa9.64□□□□□ -0.87
PDLIM5-203ENST00000359265 ATOH7Q8N100 152 aa9.64□□□□□ -0.87
PDLIM5-203ENST00000359265 UBE2D4Q9Y2X8 147 aa9.64□□□□□ -0.87
PDLIM5-203ENST00000359265 IGLV4-3A0A075B6K6 122 aa9.63□□□□□ -0.87
PDLIM5-203ENST00000359265 TRAV9-2A0A087WT02 112 aa9.63□□□□□ -0.87
PDLIM5-203ENST00000359265 F8VRH5 84 aa9.63□□□□□ -0.87
PDLIM5-203ENST00000359265 DGAT2L7PQ6IED9 249 aa9.63□□□□□ -0.87
PDLIM5-203ENST00000359265 MUC7Q8TAX7 377 aa9.63□□□□□ -0.87
PDLIM5-203ENST00000359265 CHTOPQ9Y3Y2 248 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-203ENST00000359265 DEFB131BA0A096LNP1 70 aa9.62□□□□□ -0.87
PDLIM5-203ENST00000359265 TRAV10A0A0B4J240 114 aa9.62□□□□□ -0.87
PDLIM5-203ENST00000359265 HSBP1L1C9JCN9 74 aa9.62□□□□□ -0.87
PDLIM5-203ENST00000359265 DPM2O94777 84 aa9.62□□□□□ -0.87
PDLIM5-203ENST00000359265 FGF6P10767 208 aa9.62□□□□□ -0.87
PDLIM5-203ENST00000359265 AMMECR1LQ6DCA0 310 aa9.62□□□□□ -0.87
PDLIM5-203ENST00000359265 MRPL52Q86TS9 123 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-203ENST00000359265 MRPL35Q9NZE8 188 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-203ENST00000359265 PAM16Q9Y3D7 125 aa9.62□□□□□ -0.87
PDLIM5-203ENST00000359265 A0A096LPF7 62 aa9.61□□□□□ -0.87
PDLIM5-203ENST00000359265 PRSS29PA6NIE9 313 aa9.61□□□□□ -0.87
PDLIM5-203ENST00000359265 IGKCP01834 107 aa9.61□□□□□ -0.87
PDLIM5-203ENST00000359265 PLNP26678 52 aa9.61□□□□□ -0.87
PDLIM5-203ENST00000359265 MRPS36P82909 103 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-203ENST00000359265 OPRPNQ99935 248 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-203ENST00000359265 CHCHD5Q9BSY4 110 aa9.61□□□□□ -0.87
PDLIM5-203ENST00000359265 VCX2Q9H322 139 aa9.61□□□□□ -0.87
PDLIM5-203ENST00000359265 CSDC2Q9Y534 153 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-203ENST00000359265 ZNF25P17030 456 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-203ENST00000359265 CEMP1Q6PRD7 247 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-203ENST00000359265 Q6ZUT4 128 aa9.6□□□□□ -0.87
PDLIM5-203ENST00000359265 OR5A1Q8NGJ0 315 aa9.6□□□□□ -0.87
PDLIM5-203ENST00000359265 TMEM101Q96IK0 257 aa9.6□□□□□ -0.87
PDLIM5-203ENST00000359265 C2orf88Q9BSF0 95 aa9.6□□□□□ -0.87
PDLIM5-203ENST00000359265 CST9LQ9H4G1 147 aa9.6□□□□□ -0.87
PDLIM5-203ENST00000359265 STARD9Q9P2P6 4700 aa9.6□□□□□ -0.87
PDLIM5-203ENST00000359265 TSTD3H0UI37 97 aa9.59□□□□□ -0.87
PDLIM5-203ENST00000359265 GAGE6Q13070 117 aa9.59□□□□□ -0.87
PDLIM5-203ENST00000359265 SPATA45Q537H7 98 aa9.59□□□□□ -0.87
PDLIM5-203ENST00000359265 ZNF664Q8N3J9 261 aa9.59□□□□□ -0.87
PDLIM5-203ENST00000359265 AMELXQ99217 191 aa9.59□□□□□ -0.87
PDLIM5-203ENST00000359265 STAB2Q8WWQ8 2551 aa9.59□□□□□ -0.87
PDLIM5-203ENST00000359265 FRAS1Q86XX4 4008 aa9.58□□□□□ -0.88
PDLIM5-203ENST00000359265 hDV102S1A0JD36 115 aa9.58□□□□□ -0.88
PDLIM5-203ENST00000359265 PKIAP61925 76 aa9.58□□□□□ -0.88
PDLIM5-203ENST00000359265 ZC2HC1BQ5TFG8 222 aa9.58□□□□□ -0.88
PDLIM5-203ENST00000359265 J3QL48 77 aa9.57□□□□□ -0.88
PDLIM5-203ENST00000359265 TIRAPP58753 221 aa9.57□□□□□ -0.88
PDLIM5-203ENST00000359265 MAJINQ3KP22 176 aa9.57□□□□□ -0.88
PDLIM5-203ENST00000359265 LELP1Q5T871 98 aa9.57□□□□□ -0.88
PDLIM5-203ENST00000359265 FAM104AQ969W3 186 aa9.57□□□□□ -0.88
PDLIM5-203ENST00000359265 IGLV4-69A0A075B6H9 119 aa9.56□□□□□ -0.88
PDLIM5-203ENST00000359265 RNASE13Q5GAN3 156 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-203ENST00000359265 C15orf53Q8NAA6 179 aa9.56□□□□□ -0.88
PDLIM5-203ENST00000359265 PRO1933Q9H354 126 aa9.56□□□□□ -0.88
PDLIM5-203ENST00000359265 IGLC3P0DOY3 106 aa9.55□□□□□ -0.88
PDLIM5-203ENST00000359265 CHAC1Q9BUX1 264 aa9.55□□□□□ -0.88
PDLIM5-203ENST00000359265 CDC42SE2Q9NRR3 84 aa9.55□□□□□ -0.88
PDLIM5-203ENST00000359265 C11orf86A6NJI1 115 aa9.54□□□□□ -0.88
PDLIM5-203ENST00000359265 TMEM262E9PQX1 116 aa9.54□□□□□ -0.88
PDLIM5-203ENST00000359265 NFE4Q86UQ8 179 aa9.54□□□□□ -0.88
PDLIM5-203ENST00000359265 TRAV8-6A0A0B4J262 113 aa9.53□□□□□ -0.88
PDLIM5-203ENST00000359265 A0A1B0GUV1 79 aa9.53□□□□□ -0.88
PDLIM5-203ENST00000359265 PCP4L1A6NKN8 68 aa9.53□□□□□ -0.88
PDLIM5-203ENST00000359265 ANKRD39Q53RE8 183 aa9.53□□□□□ -0.88
PDLIM5-203ENST00000359265 LYPD5Q6UWN5 251 aa9.53□□□□□ -0.88
PDLIM5-203ENST00000359265 STPG4Q8N801 248 aa9.53□□□□□ -0.88
PDLIM5-203ENST00000359265 A0A0J9YXV3 536 aa9.52□□□□□ -0.89
PDLIM5-203ENST00000359265 UBE2D1P51668 147 aa9.52□□□□□ -0.89
PDLIM5-203ENST00000359265 HERVK_113P61574 105 aa9.52□□□□□ -0.89
PDLIM5-203ENST00000359265 SEC11AP67812 179 aa9.52□□□□□ -0.89
PDLIM5-203ENST00000359265 MPV17L2Q567V2 206 aa9.52□□□□□ -0.89
PDLIM5-203ENST00000359265 ZFAND6Q6FIF0 208 aa9.52□□□□□ -0.89
PDLIM5-203ENST00000359265 IGLV4-60A0A075B6I1 120 aa9.51□□□□□ -0.89
PDLIM5-203ENST00000359265 TINCRA0A1B0GVN0 87 aa9.51□□□□□ -0.89
PDLIM5-203ENST00000359265 NUPR2A6NF83 97 aa9.51□□□□□ -0.89
PDLIM5-203ENST00000359265 RBX1P62877 108 aa9.51□□□□□ -0.89
PDLIM5-203ENST00000359265 PLECQ15149 4684 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-203ENST00000359265 TMEM170BQ5T4T1 132 aa9.51□□□□□ -0.89
PDLIM5-203ENST00000359265 GEMIN7Q9H840 131 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-203ENST00000359265 UQCR10Q9UDW1 63 aa9.51□□□□□ -0.89
PDLIM5-203ENST00000359265 KIAA1109Q2LD37 5005 aa9.51□□□□□ -0.89
PDLIM5-203ENST00000359265 ZNF22P17026 224 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-203ENST00000359265 FAM19A3Q7Z5A8 133 aa9.5□□□□□ -0.89
PDLIM5-203ENST00000359265 TRAV13-1A0A0B4J241 112 aa9.49□□□□□ -0.89
PDLIM5-203ENST00000359265 NMUP48645 174 aa9.49□□□□□ -0.89
PDLIM5-203ENST00000359265 HERVK_113P63121 156 aa9.49□□□□□ -0.89
PDLIM5-203ENST00000359265 MIEN1Q9BRT3 115 aa9.49□□□□□ -0.89
PDLIM5-203ENST00000359265 KLK5Q9Y337 293 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-203ENST00000359265 IGLL5B9A064 214 aa9.48□□□□□ -0.89
PDLIM5-203ENST00000359265 COX8AP10176 69 aa9.48□□□□□ -0.89
PDLIM5-203ENST00000359265 TCTAP57738 103 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms