RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 PIK3CD-AS1Q5SR53 167 aa9.56□□□□□ -0.88
NLRC3-202ENST00000359128 LINC00526Q96FQ7 95 aa9.56□□□□□ -0.88
NLRC3-202ENST00000359128 C11orf1Q9H5F2 150 aa9.56□□□□□ -0.88
NLRC3-202ENST00000359128 NDUFC2O95298 119 aa9.56□□□□□ -0.88
NLRC3-202ENST00000359128 KRTAP10-9P60411 292 aa9.56□□□□□ -0.88
NLRC3-202ENST00000359128 BRWD1-AS2P59051 145 aa9.56□□□□□ -0.88
NLRC3-202ENST00000359128 C1orf158Q8N1D5 194 aa9.56□□□□□ -0.88
NLRC3-202ENST00000359128 COA6Q5JTJ3 125 aaKnown RBP9.56□□□□□ -0.88
NLRC3-202ENST00000359128 EIF4EBP1Q13541 118 aaPredicted RBP9.56□□□□□ -0.88
NLRC3-202ENST00000359128 SCXQ7RTU7 201 aa9.56□□□□□ -0.88
NLRC3-202ENST00000359128 FSHBP01225 129 aa9.55□□□□□ -0.88
NLRC3-202ENST00000359128 ZNF22P17026 224 aaPredicted RBP9.55□□□□□ -0.88
NLRC3-202ENST00000359128 TEX49A0A1B0GTD5 131 aa9.55□□□□□ -0.88
NLRC3-202ENST00000359128 A0A1B0GXF2 115 aa9.55□□□□□ -0.88
NLRC3-202ENST00000359128 WFDC2Q14508 124 aa9.55□□□□□ -0.88
NLRC3-202ENST00000359128 DSCAMO60469 2012 aa9.55□□□□□ -0.88
NLRC3-202ENST00000359128 LINC00959A0A1B0GUT2 108 aa9.55□□□□□ -0.88
NLRC3-202ENST00000359128 FRMD6-AS1P0C7T7 363 aa9.55□□□□□ -0.88
NLRC3-202ENST00000359128 CDSNQ15517 529 aa9.55□□□□□ -0.88
NLRC3-202ENST00000359128 TCL1BO95988 128 aa9.54□□□□□ -0.88
NLRC3-202ENST00000359128 MRGPRG-AS1Q2M3A8 158 aa9.54□□□□□ -0.88
NLRC3-202ENST00000359128 LINC00308Q8TCZ7 52 aa9.54□□□□□ -0.88
NLRC3-202ENST00000359128 ZFHX2Q9C0A1 2572 aaPredicted RBP9.54□□□□□ -0.88
NLRC3-202ENST00000359128 IGLV2-8P01709 118 aa9.54□□□□□ -0.88
NLRC3-202ENST00000359128 TDRG1Q3Y452 100 aa9.53□□□□□ -0.88
NLRC3-202ENST00000359128 CDPF1Q6NVV7 123 aa9.53□□□□□ -0.88
NLRC3-202ENST00000359128 B5MCH6 92 aa9.53□□□□□ -0.88
NLRC3-202ENST00000359128 C6orf99Q4VX62 202 aa9.53□□□□□ -0.88
NLRC3-202ENST00000359128 PCNX1Q96RV3 2341 aa9.52□□□□□ -0.89
NLRC3-202ENST00000359128 C3orf84H3BNL1 204 aa9.52□□□□□ -0.89
NLRC3-202ENST00000359128 RPL28P46779 137 aaKnown RBP9.52□□□□□ -0.89
NLRC3-202ENST00000359128 CCKP06307 115 aa9.52□□□□□ -0.89
NLRC3-202ENST00000359128 C16orf95Q9H693 158 aa9.51□□□□□ -0.89
NLRC3-202ENST00000359128 BRI3O95415 125 aa9.51□□□□□ -0.89
NLRC3-202ENST00000359128 NCOA6Q14686 2063 aaPredicted RBP9.51□□□□□ -0.89
NLRC3-202ENST00000359128 C3orf22Q8N5N4 141 aa9.51□□□□□ -0.89
NLRC3-202ENST00000359128 PRR15LQ9BU68 103 aa9.51□□□□□ -0.89
NLRC3-202ENST00000359128 AVPP01185 164 aa9.5□□□□□ -0.89
NLRC3-202ENST00000359128 TSHBP01222 138 aa9.5□□□□□ -0.89
NLRC3-202ENST00000359128 PRM2P04554 102 aa9.5□□□□□ -0.89
NLRC3-202ENST00000359128 CRIP1P50238 77 aa9.5□□□□□ -0.89
NLRC3-202ENST00000359128 C10orf25Q5T742 122 aa9.5□□□□□ -0.89
NLRC3-202ENST00000359128 C1orf134Q5TEV5 83 aa9.5□□□□□ -0.89
NLRC3-202ENST00000359128 COX17Q14061 63 aa9.5□□□□□ -0.89
NLRC3-202ENST00000359128 PYGO1Q9Y3Y4 419 aa9.5□□□□□ -0.89
NLRC3-202ENST00000359128 MLST8Q9BVC4 326 aa9.5□□□□□ -0.89
NLRC3-202ENST00000359128 ARHGAP21Q5T5U3 1957 aa9.5□□□□□ -0.89
NLRC3-202ENST00000359128 M0QXV9 152 aa9.5□□□□□ -0.89
NLRC3-202ENST00000359128 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.49□□□□□ -0.89
NLRC3-202ENST00000359128 Q6ZPA2 131 aa9.49□□□□□ -0.89
NLRC3-202ENST00000359128 LINC00643Q86TS7 51 aa9.49□□□□□ -0.89
NLRC3-202ENST00000359128 RNF185Q96GF1 192 aa9.49□□□□□ -0.89
NLRC3-202ENST00000359128 ABCA1O95477 2261 aa9.49□□□□□ -0.89
NLRC3-202ENST00000359128 TAX1BP3O14907 124 aa9.48□□□□□ -0.89
NLRC3-202ENST00000359128 CIRBP-AS1Q8TBR5 109 aa9.48□□□□□ -0.89
NLRC3-202ENST00000359128 TRBV6-5A0A0K0K1A5 114 aa9.48□□□□□ -0.89
NLRC3-202ENST00000359128 RNASE3P12724 160 aaKnown RBP9.48□□□□□ -0.89
NLRC3-202ENST00000359128 ENHOQ6UWT2 76 aa9.48□□□□□ -0.89
NLRC3-202ENST00000359128 TRBV27A0A0K0K1C4 114 aa9.47□□□□□ -0.89
NLRC3-202ENST00000359128 KLLNB2CW77 178 aa9.47□□□□□ -0.89
NLRC3-202ENST00000359128 SDIM1Q6ZPB5 146 aa9.47□□□□□ -0.89
NLRC3-202ENST00000359128 PRR9Q5T870 116 aa9.47□□□□□ -0.89
NLRC3-202ENST00000359128 PTH2Q96A98 100 aa9.47□□□□□ -0.89
NLRC3-202ENST00000359128 MRPS36P82909 103 aaKnown RBP9.46□□□□□ -0.89
NLRC3-202ENST00000359128 NHLRC4P0CG21 123 aaPredicted RBP9.46□□□□□ -0.9
NLRC3-202ENST00000359128 SVIPQ8NHG7 77 aa9.46□□□□□ -0.9
NLRC3-202ENST00000359128 ATP5EP2Q5VTU8 51 aa9.46□□□□□ -0.9
NLRC3-202ENST00000359128 SERP1Q9Y6X1 66 aa9.45□□□□□ -0.9
NLRC3-202ENST00000359128 A8MZ25 164 aa9.45□□□□□ -0.9
NLRC3-202ENST00000359128 J3KT08 172 aa9.45□□□□□ -0.9
NLRC3-202ENST00000359128 WFDC13Q8IUB5 93 aa9.45□□□□□ -0.9
NLRC3-202ENST00000359128 IGLV1-51P01701 117 aa9.45□□□□□ -0.9
NLRC3-202ENST00000359128 CRIP3Q6Q6R5 217 aa9.45□□□□□ -0.9
NLRC3-202ENST00000359128 REG3GQ6UW15 175 aa9.44□□□□□ -0.9
NLRC3-202ENST00000359128 Q6ZTC4 211 aa9.44□□□□□ -0.9
NLRC3-202ENST00000359128 Q8IZM0 81 aa9.44□□□□□ -0.9
NLRC3-202ENST00000359128 KIAA1549Q9HCM3 1950 aa9.44□□□□□ -0.9
NLRC3-202ENST00000359128 HIVEP2P31629 2446 aa9.44□□□□□ -0.9
NLRC3-202ENST00000359128 TRBV30A0A0K0K1B3 111 aa9.44□□□□□ -0.9
NLRC3-202ENST00000359128 CYSRT1A8MQ03 144 aa9.43□□□□□ -0.9
NLRC3-202ENST00000359128 ZNF73O43830 326 aaPredicted RBP9.43□□□□□ -0.9
NLRC3-202ENST00000359128 TIMM17BO60830 172 aa9.43□□□□□ -0.9
NLRC3-202ENST00000359128 MUC22E2RYF6 1773 aaPredicted RBP9.43□□□□□ -0.9
NLRC3-202ENST00000359128 EDN2P20800 178 aa9.43□□□□□ -0.9
NLRC3-202ENST00000359128 Q6ZQY7 126 aa9.43□□□□□ -0.9
NLRC3-202ENST00000359128 IGLV2-11P01706 119 aa9.43□□□□□ -0.9
NLRC3-202ENST00000359128 SPTSSBQ8NFR3 76 aa9.43□□□□□ -0.9
NLRC3-202ENST00000359128 TRIAP1O43715 76 aa9.43□□□□□ -0.9
NLRC3-202ENST00000359128 C1orf137Q5JT78 98 aa9.42□□□□□ -0.9
NLRC3-202ENST00000359128 LINC01556Q5JQF7 62 aa9.42□□□□□ -0.9
NLRC3-202ENST00000359128 ZNF295-AS1Q8N0V1 137 aa9.42□□□□□ -0.9
NLRC3-202ENST00000359128 MED12LQ86YW9 2145 aa9.42□□□□□ -0.9
NLRC3-202ENST00000359128 ODF3L2Q3SX64 289 aa9.42□□□□□ -0.9
NLRC3-202ENST00000359128 MUC7Q8TAX7 377 aa9.42□□□□□ -0.9
NLRC3-202ENST00000359128 FAM236DA0A1B0GTK5 79 aa9.41□□□□□ -0.9
NLRC3-202ENST00000359128 FAM236CP0DP71 79 aa9.41□□□□□ -0.9
NLRC3-202ENST00000359128 Q6ZVQ6 151 aa9.41□□□□□ -0.9
NLRC3-202ENST00000359128 C6orf223Q8N319 242 aa9.41□□□□□ -0.9
NLRC3-202ENST00000359128 CHCHD7Q9BUK0 85 aa9.41□□□□□ -0.9
NLRC3-202ENST00000359128 COL5A1P20908 1838 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms