RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 NDUFV3P56181 108 aaKnown RBP7.64□□□□□ -1.19
CLIP1-202ENST00000358808 DEFB114Q30KQ6 69 aa7.64□□□□□ -1.19
CLIP1-202ENST00000358808 ATP5EP2Q5VTU8 51 aa7.64□□□□□ -1.19
CLIP1-202ENST00000358808 CIRBP-AS1Q8TBR5 109 aa7.64□□□□□ -1.19
CLIP1-202ENST00000358808 LINC00474Q9P2X8 69 aa7.64□□□□□ -1.19
CLIP1-202ENST00000358808 LY6G6DO95868 133 aa7.64□□□□□ -1.19
CLIP1-202ENST00000358808 FBXL19-AS1Q494R0 122 aa7.64□□□□□ -1.19
CLIP1-202ENST00000358808 ZFHX2Q9C0A1 2572 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-202ENST00000358808 TECTAO75443 2155 aa7.63□□□□□ -1.19
CLIP1-202ENST00000358808 C6orf99Q4VX62 202 aa7.63□□□□□ -1.19
CLIP1-202ENST00000358808 BBC3Q96PG8 261 aaPredicted RBP7.63□□□□□ -1.19
CLIP1-202ENST00000358808 TRBV6-8A0A0A6YYG3 113 aa7.63□□□□□ -1.19
CLIP1-202ENST00000358808 IBA57-AS1B1ANH7 110 aa7.63□□□□□ -1.19
CLIP1-202ENST00000358808 IGLC6P0CF74 106 aa7.63□□□□□ -1.19
CLIP1-202ENST00000358808 FAM30AQ9NZY2 134 aa7.63□□□□□ -1.19
CLIP1-202ENST00000358808 SNURFQ9Y675 71 aa7.63□□□□□ -1.19
CLIP1-202ENST00000358808 DENND4AQ7Z401 1863 aa7.63□□□□□ -1.19
CLIP1-202ENST00000358808 IGLV4-69A0A075B6H9 119 aa7.63□□□□□ -1.19
CLIP1-202ENST00000358808 KRTAP27-1Q3LI81 207 aa7.63□□□□□ -1.19
CLIP1-202ENST00000358808 NEXN-AS1Q8NBZ9 246 aa7.63□□□□□ -1.19
CLIP1-202ENST00000358808 PTPN13Q12923 2485 aa7.62□□□□□ -1.19
CLIP1-202ENST00000358808 KPRPQ5T749 579 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-202ENST00000358808 LINC00526Q96FQ7 95 aa7.62□□□□□ -1.19
CLIP1-202ENST00000358808 M0R378 163 aa7.62□□□□□ -1.19
CLIP1-202ENST00000358808 TMEM223A0PJW6 202 aa7.62□□□□□ -1.19
CLIP1-202ENST00000358808 C10orf25Q5T742 122 aa7.62□□□□□ -1.19
CLIP1-202ENST00000358808 CCDC140Q96MF4 163 aa7.61□□□□□ -1.19
CLIP1-202ENST00000358808 CDKN2A-AS1Q9UH64 79 aa7.61□□□□□ -1.19
CLIP1-202ENST00000358808 FAM19A3Q7Z5A8 133 aa7.61□□□□□ -1.19
CLIP1-202ENST00000358808 PLXNB3Q9ULL4 1909 aa7.61□□□□□ -1.19
CLIP1-202ENST00000358808 TRBV27A0A0K0K1C4 114 aa7.61□□□□□ -1.19
CLIP1-202ENST00000358808 ESRGQ1W209 222 aa7.61□□□□□ -1.19
CLIP1-202ENST00000358808 FAM167A-AS1Q96KT0 104 aa7.61□□□□□ -1.19
CLIP1-202ENST00000358808 Q8N976 141 aa7.61□□□□□ -1.19
CLIP1-202ENST00000358808 NCKAP5O14513 1909 aa7.61□□□□□ -1.19
CLIP1-202ENST00000358808 ODF3Q96PU9 254 aa7.6□□□□□ -1.19
CLIP1-202ENST00000358808 CLUHP3Q96NS8 147 aa7.6□□□□□ -1.19
CLIP1-202ENST00000358808 MUC22E2RYF6 1773 aaPredicted RBP7.6□□□□□ -1.19
CLIP1-202ENST00000358808 IGLV5-52A0A0A0MRZ9 124 aa7.6□□□□□ -1.19
CLIP1-202ENST00000358808 C19orf71A6NCJ1 209 aa7.6□□□□□ -1.19
CLIP1-202ENST00000358808 PLXNB1O43157 2135 aa7.6□□□□□ -1.19
CLIP1-202ENST00000358808 UQCRQO14949 82 aa7.6□□□□□ -1.19
CLIP1-202ENST00000358808 SPINK1P00995 79 aa7.6□□□□□ -1.19
CLIP1-202ENST00000358808 IGLV1-47P01700 117 aa7.59□□□□□ -1.19
CLIP1-202ENST00000358808 RPL28P46779 137 aaKnown RBP7.59□□□□□ -1.19
CLIP1-202ENST00000358808 NANOS2P60321 138 aaKnown RBP7.59□□□□□ -1.19
CLIP1-202ENST00000358808 DOPEY1Q5JWR5 2465 aa7.59□□□□□ -1.19
CLIP1-202ENST00000358808 ATP5EP56381 51 aaPredicted RBP7.59□□□□□ -1.19
CLIP1-202ENST00000358808 CFAP126Q5VTH2 177 aa7.59□□□□□ -1.19
CLIP1-202ENST00000358808 LINC00308Q8TCZ7 52 aa7.59□□□□□ -1.19
CLIP1-202ENST00000358808 Q6ZSV7 163 aa7.58□□□□□ -1.2
CLIP1-202ENST00000358808 E7EUB6 86 aa7.58□□□□□ -1.2
CLIP1-202ENST00000358808 TRBV6-4A0A1B0GX49 114 aa7.58□□□□□ -1.2
CLIP1-202ENST00000358808 Q6ZQY7 126 aa7.58□□□□□ -1.2
CLIP1-202ENST00000358808 TRBV6-5A0A0K0K1A5 114 aa7.58□□□□□ -1.2
CLIP1-202ENST00000358808 PLA2G1BP04054 148 aaKnown RBP7.57□□□□□ -1.2
CLIP1-202ENST00000358808 PRR14LQ5THK1 2151 aa7.57□□□□□ -1.2
CLIP1-202ENST00000358808 K7EQG2 157 aa7.57□□□□□ -1.2
CLIP1-202ENST00000358808 WISP2O76076 250 aa7.57□□□□□ -1.2
CLIP1-202ENST00000358808 IGHV6-1A0A0B4J1U7 121 aa7.57□□□□□ -1.2
CLIP1-202ENST00000358808 ZNF80P51504 273 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-202ENST00000358808 LOC100131303A0A0U1RQF7 123 aa7.56□□□□□ -1.2
CLIP1-202ENST00000358808 IGLV2-8P01709 118 aa7.56□□□□□ -1.2
CLIP1-202ENST00000358808 CD164L2Q6UWJ8 174 aa7.56□□□□□ -1.2
CLIP1-202ENST00000358808 C20orf173Q96LM9 149 aa7.56□□□□□ -1.2
CLIP1-202ENST00000358808 IGLV4-3A0A075B6K6 122 aa7.56□□□□□ -1.2
CLIP1-202ENST00000358808 NDUFC1O43677 76 aa7.56□□□□□ -1.2
CLIP1-202ENST00000358808 LELP1Q5T871 98 aa7.56□□□□□ -1.2
CLIP1-202ENST00000358808 ODF3BA8MYP8 253 aa7.56□□□□□ -1.2
CLIP1-202ENST00000358808 A0A1B0GXF2 115 aa7.56□□□□□ -1.2
CLIP1-202ENST00000358808 M0QXV9 152 aa7.56□□□□□ -1.2
CLIP1-202ENST00000358808 PROK1P58294 105 aa7.56□□□□□ -1.2
CLIP1-202ENST00000358808 RBX1P62877 108 aa7.56□□□□□ -1.2
CLIP1-202ENST00000358808 WFDC10AQ9H1F0 79 aa7.56□□□□□ -1.2
CLIP1-202ENST00000358808 LST1O00453 97 aa7.55□□□□□ -1.2
CLIP1-202ENST00000358808 TIMM17BO60830 172 aa7.55□□□□□ -1.2
CLIP1-202ENST00000358808 IGLV2-11P01706 119 aa7.55□□□□□ -1.2
CLIP1-202ENST00000358808 LMO4P61968 165 aa7.55□□□□□ -1.2
CLIP1-202ENST00000358808 ZNF22P17026 224 aaPredicted RBP7.55□□□□□ -1.2
CLIP1-202ENST00000358808 TMEM131Q92545 1883 aa7.55□□□□□ -1.2
CLIP1-202ENST00000358808 TRBV7-6A0A0J9YX20 115 aa7.55□□□□□ -1.2
CLIP1-202ENST00000358808 C22orf34Q6ZV56 151 aa7.55□□□□□ -1.2
CLIP1-202ENST00000358808 ZNF106Q9H2Y7 1883 aaKnown RBP7.55□□□□□ -1.2
CLIP1-202ENST00000358808 ANKHD1Q8IWZ3 2542 aaKnown RBP7.54□□□□□ -1.2
CLIP1-202ENST00000358808 POM121L12Q8N7R1 296 aa7.54□□□□□ -1.2
CLIP1-202ENST00000358808 CEP192Q8TEP8 1941 aa7.54□□□□□ -1.2
CLIP1-202ENST00000358808 MT-ATP8P03928 68 aa7.54□□□□□ -1.2
CLIP1-202ENST00000358808 TRIAP1O43715 76 aa7.53□□□□□ -1.2
CLIP1-202ENST00000358808 PLA2G2AP14555 144 aa7.53□□□□□ -1.2
CLIP1-202ENST00000358808 LINC00337Q8N6G1 96 aa7.53□□□□□ -1.2
CLIP1-202ENST00000358808 ZNF73O43830 326 aaPredicted RBP7.53□□□□□ -1.2
CLIP1-202ENST00000358808 Q6ZSR3 168 aa7.53□□□□□ -1.2
CLIP1-202ENST00000358808 TP73-AS1Q9UF72 201 aa7.53□□□□□ -1.2
CLIP1-202ENST00000358808 CELA1Q9UNI1 258 aa7.52□□□□□ -1.2
CLIP1-202ENST00000358808 IGLV2-14P01704 120 aa7.52□□□□□ -1.21
CLIP1-202ENST00000358808 MSMPQ1L6U9 139 aa7.52□□□□□ -1.21
CLIP1-202ENST00000358808 C1orf137Q5JT78 98 aa7.52□□□□□ -1.21
CLIP1-202ENST00000358808 LINC00959A0A1B0GUT2 108 aa7.52□□□□□ -1.21
CLIP1-202ENST00000358808 LINC01556Q5JQF7 62 aa7.52□□□□□ -1.21
CLIP1-202ENST00000358808 C10orf99Q6UWK7 81 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms