RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 Q6ZUT4 128 aa11.81□□□□□ -0.52
TPM1-205ENST00000357980 CHTOPQ9Y3Y2 248 aaKnown RBP11.81□□□□□ -0.52
TPM1-205ENST00000357980 PRKDCP78527 4128 aaKnown RBP11.81□□□□□ -0.52
TPM1-205ENST00000357980 hDV102S1A0JD36 115 aa11.8□□□□□ -0.52
TPM1-205ENST00000357980 UBE2L6O14933 153 aa11.8□□□□□ -0.52
TPM1-205ENST00000357980 IGKCP01834 107 aa11.8□□□□□ -0.52
TPM1-205ENST00000357980 PLNP26678 52 aa11.8□□□□□ -0.52
TPM1-205ENST00000357980 VCX2Q9H322 139 aa11.8□□□□□ -0.52
TPM1-205ENST00000357980 IGLV4-69A0A075B6H9 119 aa11.79□□□□□ -0.52
TPM1-205ENST00000357980 TRAV10A0A0B4J240 114 aa11.79□□□□□ -0.52
TPM1-205ENST00000357980 NHLRC4P0CG21 123 aaPredicted RBP11.79□□□□□ -0.52
TPM1-205ENST00000357980 SMAGPQ0VAQ4 97 aa11.79□□□□□ -0.52
TPM1-205ENST00000357980 SPATA45Q537H7 98 aa11.79□□□□□ -0.52
TPM1-205ENST00000357980 RNASE13Q5GAN3 156 aaKnown RBP11.79□□□□□ -0.52
TPM1-205ENST00000357980 CHCHD5Q9BSY4 110 aa11.79□□□□□ -0.52
TPM1-205ENST00000357980 ZNF25P17030 456 aaPredicted RBP11.78□□□□□ -0.52
TPM1-205ENST00000357980 GAGE6Q13070 117 aa11.78□□□□□ -0.52
TPM1-205ENST00000357980 DGAT2L7PQ6IED9 249 aa11.78□□□□□ -0.52
TPM1-205ENST00000357980 AMMECR1LQ6DCA0 310 aa11.77□□□□□ -0.52
TPM1-205ENST00000357980 PRO1933Q9H354 126 aa11.77□□□□□ -0.52
TPM1-205ENST00000357980 PKIAP61925 76 aa11.76□□□□□ -0.53
TPM1-205ENST00000357980 OR5A1Q8NGJ0 315 aa11.76□□□□□ -0.53
TPM1-205ENST00000357980 CDC42SE2Q9NRR3 84 aa11.76□□□□□ -0.53
TPM1-205ENST00000357980 HSBP1L1C9JCN9 74 aa11.76□□□□□ -0.53
TPM1-205ENST00000357980 STPG4Q8N801 248 aa11.76□□□□□ -0.53
TPM1-205ENST00000357980 C11orf86A6NJI1 115 aa11.75□□□□□ -0.53
TPM1-205ENST00000357980 TIRAPP58753 221 aa11.75□□□□□ -0.53
TPM1-205ENST00000357980 IGLC3P0DOY3 106 aa11.74□□□□□ -0.53
TPM1-205ENST00000357980 LELP1Q5T871 98 aa11.74□□□□□ -0.53
TPM1-205ENST00000357980 LYPD5Q6UWN5 251 aa11.74□□□□□ -0.53
TPM1-205ENST00000357980 NFE4Q86UQ8 179 aa11.74□□□□□ -0.53
TPM1-205ENST00000357980 TMEM101Q96IK0 257 aa11.74□□□□□ -0.53
TPM1-205ENST00000357980 IGLV4-60A0A075B6I1 120 aa11.74□□□□□ -0.53
TPM1-205ENST00000357980 TSTD3H0UI37 97 aa11.74□□□□□ -0.53
TPM1-205ENST00000357980 ANKRD39Q53RE8 183 aa11.74□□□□□ -0.53
TPM1-205ENST00000357980 C2orf88Q9BSF0 95 aa11.74□□□□□ -0.53
TPM1-205ENST00000357980 A0A1B0GUV1 79 aa11.73□□□□□ -0.53
TPM1-205ENST00000357980 UBE2D1P51668 147 aa11.73□□□□□ -0.53
TPM1-205ENST00000357980 A0A0J9YXV3 536 aa11.72□□□□□ -0.53
TPM1-205ENST00000357980 MPV17L2Q567V2 206 aa11.72□□□□□ -0.53
TPM1-205ENST00000357980 PCP4L1A6NKN8 68 aa11.72□□□□□ -0.53
TPM1-205ENST00000357980 RBX1P62877 108 aa11.72□□□□□ -0.53
TPM1-205ENST00000357980 CHAC1Q9BUX1 264 aa11.72□□□□□ -0.53
TPM1-205ENST00000357980 TMEM262E9PQX1 116 aa11.7□□□□□ -0.54
TPM1-205ENST00000357980 C15orf53Q8NAA6 179 aa11.7□□□□□ -0.54
TPM1-205ENST00000357980 TINCRA0A1B0GVN0 87 aa11.7□□□□□ -0.54
TPM1-205ENST00000357980 FAM19A3Q7Z5A8 133 aa11.7□□□□□ -0.54
TPM1-205ENST00000357980 TCTAP57738 103 aa11.69□□□□□ -0.54
TPM1-205ENST00000357980 ESRGQ1W209 222 aa11.69□□□□□ -0.54
TPM1-205ENST00000357980 C14orf144Q96I85 54 aa11.69□□□□□ -0.54
TPM1-205ENST00000357980 IGKV2D-26A0A0A0MRZ7 120 aa11.68□□□□□ -0.54
TPM1-205ENST00000357980 ZNF22P17026 224 aaPredicted RBP11.68□□□□□ -0.54
TPM1-205ENST00000357980 Q8N3U1 123 aa11.68□□□□□ -0.54
TPM1-205ENST00000357980 TMEM170BQ5T4T1 132 aa11.67□□□□□ -0.54
TPM1-205ENST00000357980 LINC00242Q5T6M2 205 aa11.67□□□□□ -0.54
TPM1-205ENST00000357980 MIEN1Q9BRT3 115 aa11.67□□□□□ -0.54
TPM1-205ENST00000357980 FBN3Q75N90 2809 aa11.67□□□□□ -0.54
TPM1-205ENST00000357980 TRAV13-1A0A0B4J241 112 aa11.67□□□□□ -0.54
TPM1-205ENST00000357980 COX8AP10176 69 aa11.66□□□□□ -0.54
TPM1-205ENST00000357980 DDTP30046 118 aa11.66□□□□□ -0.54
TPM1-205ENST00000357980 UQCR10Q9UDW1 63 aa11.66□□□□□ -0.54
TPM1-205ENST00000357980 IGLV5-45A0A087WSX0 123 aa11.65□□□□□ -0.54
TPM1-205ENST00000357980 TRAV8-6A0A0B4J262 113 aa11.65□□□□□ -0.54
TPM1-205ENST00000357980 E9PLD3 99 aa11.65□□□□□ -0.54
TPM1-205ENST00000357980 TP73-AS1Q9UF72 201 aa11.65□□□□□ -0.54
TPM1-205ENST00000357980 IGLL5B9A064 214 aa11.65□□□□□ -0.55
TPM1-205ENST00000357980 NMUP48645 174 aa11.65□□□□□ -0.55
TPM1-205ENST00000357980 COX6A2Q02221 97 aa11.65□□□□□ -0.55
TPM1-205ENST00000357980 TMEM223A0PJW6 202 aa11.64□□□□□ -0.55
TPM1-205ENST00000357980 SEC11AP67812 179 aa11.64□□□□□ -0.55
TPM1-205ENST00000357980 WFDC10BQ8IUB3 73 aa11.64□□□□□ -0.55
TPM1-205ENST00000357980 GEMIN7Q9H840 131 aaKnown RBP11.64□□□□□ -0.55
TPM1-205ENST00000357980 HERVK_113P63121 156 aa11.63□□□□□ -0.55
TPM1-205ENST00000357980 PCP2Q8IVA1 136 aa11.63□□□□□ -0.55
TPM1-205ENST00000357980 HERVK_113P61574 105 aa11.63□□□□□ -0.55
TPM1-205ENST00000357980 SLC25A34Q6PIV7 304 aa11.63□□□□□ -0.55
TPM1-205ENST00000357980 LINC00469Q8N7U9 141 aa11.63□□□□□ -0.55
TPM1-205ENST00000357980 CDKN2A-AS1Q9UH64 79 aa11.63□□□□□ -0.55
TPM1-205ENST00000357980 IGKV3OR2-268A0A0C4DH90 116 aa11.62□□□□□ -0.55
TPM1-205ENST00000357980 LINC00959A0A1B0GUT2 108 aa11.62□□□□□ -0.55
TPM1-205ENST00000357980 ANGP03950 147 aaKnown RBP11.62□□□□□ -0.55
TPM1-205ENST00000357980 BOD1L2Q8IYS8 172 aa11.62□□□□□ -0.55
TPM1-205ENST00000357980 LINC00269Q8N2A0 174 aa11.62□□□□□ -0.55
TPM1-205ENST00000357980 CSMD3Q7Z407 3707 aa11.61□□□□□ -0.55
TPM1-205ENST00000357980 TTTY13Q9BZ97 58 aa11.61□□□□□ -0.55
TPM1-205ENST00000357980 DLEU1O43261 78 aa11.6□□□□□ -0.55
TPM1-205ENST00000357980 CLPSL2Q6UWE3 100 aa11.6□□□□□ -0.55
TPM1-205ENST00000357980 DYNC2H1Q8NCM8 4307 aaKnown RBP11.6□□□□□ -0.55
TPM1-205ENST00000357980 LINC00587B1AMM8 73 aa11.6□□□□□ -0.55
TPM1-205ENST00000357980 REG3AQ06141 175 aa11.59□□□□□ -0.55
TPM1-205ENST00000357980 PRR34Q9NV39 138 aa11.59□□□□□ -0.55
TPM1-205ENST00000357980 LINC00588Q9Y4M8 146 aa11.59□□□□□ -0.55
TPM1-205ENST00000357980 TSPEAR-AS2P59090 65 aa11.58□□□□□ -0.56
TPM1-205ENST00000357980 MRPS16Q9Y3D3 137 aaKnown RBP11.58□□□□□ -0.56
TPM1-205ENST00000357980 DNAH7Q8WXX0 4024 aa11.58□□□□□ -0.56
TPM1-205ENST00000357980 IGHV3OR16-9A0A0B4J2B5 98 aa11.58□□□□□ -0.56
TPM1-205ENST00000357980 H3BRM9 83 aa11.58□□□□□ -0.56
TPM1-205ENST00000357980 IGHV3-30P01768 117 aa11.58□□□□□ -0.56
TPM1-205ENST00000357980 IGHV3-33P01772 117 aa11.58□□□□□ -0.56
TPM1-205ENST00000357980 SPINK8P0C7L1 97 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms