RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 KRTAP1-4P0C5Y4 121 aa9.51□□□□□ -0.89
IFT20-202ENST00000357896 RGS21Q2M5E4 152 aa9.51□□□□□ -0.89
IFT20-202ENST00000357896 KCNRGQ8N5I3 272 aa9.51□□□□□ -0.89
IFT20-202ENST00000357896 C2orf48Q96LS8 159 aa9.51□□□□□ -0.89
IFT20-202ENST00000357896 A0A1B0GV50 99 aa9.5□□□□□ -0.89
IFT20-202ENST00000357896 I3L3M4 83 aa9.5□□□□□ -0.89
IFT20-202ENST00000357896 COX7A2LO14548 114 aa9.5□□□□□ -0.89
IFT20-202ENST00000357896 CENPWQ5EE01 88 aa9.5□□□□□ -0.89
IFT20-202ENST00000357896 RPL39LQ96EH5 51 aaKnown RBP9.5□□□□□ -0.89
IFT20-202ENST00000357896 FAM210AQ96ND0 272 aa9.5□□□□□ -0.89
IFT20-202ENST00000357896 CDC42SE2Q9NRR3 84 aa9.5□□□□□ -0.89
IFT20-202ENST00000357896 C1orf196B1AJZ1 125 aa9.49□□□□□ -0.89
IFT20-202ENST00000357896 BCL2L11O43521 198 aa9.49□□□□□ -0.89
IFT20-202ENST00000357896 PMCHP20382 165 aa9.49□□□□□ -0.89
IFT20-202ENST00000357896 CTRLP40313 264 aa9.49□□□□□ -0.89
IFT20-202ENST00000357896 RNF151Q2KHN1 245 aa9.49□□□□□ -0.89
IFT20-202ENST00000357896 FAM213BQ8TBF2 198 aa9.49□□□□□ -0.89
IFT20-202ENST00000357896 SMIM12Q96EX1 92 aa9.49□□□□□ -0.89
IFT20-202ENST00000357896 MRAP2Q96G30 205 aa9.49□□□□□ -0.89
IFT20-202ENST00000357896 CNFNQ9BYD5 112 aa9.49□□□□□ -0.89
IFT20-202ENST00000357896 CYTL1Q9NRR1 136 aa9.49□□□□□ -0.89
IFT20-202ENST00000357896 CARHSP1Q9Y2V2 147 aaKnown RBP9.49□□□□□ -0.89
IFT20-202ENST00000357896 UMAD1C9J7I0 102 aa9.48□□□□□ -0.89
IFT20-202ENST00000357896 ESDP10768 282 aa9.48□□□□□ -0.89
IFT20-202ENST00000357896 SMIM15Q7Z3B0 74 aa9.48□□□□□ -0.89
IFT20-202ENST00000357896 GNG4P50150 75 aa9.47□□□□□ -0.89
IFT20-202ENST00000357896 MRPL52Q86TS9 123 aaKnown RBP9.47□□□□□ -0.89
IFT20-202ENST00000357896 C11orf52Q96A22 123 aa9.47□□□□□ -0.89
IFT20-202ENST00000357896 OPRPNQ99935 248 aaPredicted RBP9.47□□□□□ -0.89
IFT20-202ENST00000357896 BIN3Q9NQY0 253 aa9.47□□□□□ -0.89
IFT20-202ENST00000357896 H2AFB1P0C5Y9 115 aa9.45□□□□□ -0.9
IFT20-202ENST00000357896 CCL20P78556 96 aa9.45□□□□□ -0.9
IFT20-202ENST00000357896 IMMP2LQ96T52 175 aa9.45□□□□□ -0.9
IFT20-202ENST00000357896 TRBV6-5A0A0K0K1A5 114 aa9.44□□□□□ -0.9
IFT20-202ENST00000357896 G3V3Q6 166 aa9.44□□□□□ -0.9
IFT20-202ENST00000357896 ARPC5O15511 151 aa9.44□□□□□ -0.9
IFT20-202ENST00000357896 TSPAN13O95857 204 aa9.44□□□□□ -0.9
IFT20-202ENST00000357896 KRTAP11-1Q8IUC1 163 aa9.44□□□□□ -0.9
IFT20-202ENST00000357896 MANBALQ9NQG1 85 aa9.44□□□□□ -0.9
IFT20-202ENST00000357896 TSHBP01222 138 aa9.43□□□□□ -0.9
IFT20-202ENST00000357896 MRPL35Q9NZE8 188 aaKnown RBP9.43□□□□□ -0.9
IFT20-202ENST00000357896 FAM168BA1KXE4 195 aa9.42□□□□□ -0.9
IFT20-202ENST00000357896 RAB19A4D1S5 217 aa9.42□□□□□ -0.9
IFT20-202ENST00000357896 F8WDY8 70 aa9.42□□□□□ -0.9
IFT20-202ENST00000357896 SPAG11BQ08648 103 aa9.42□□□□□ -0.9
IFT20-202ENST00000357896 ST20Q9HBF5 79 aa9.42□□□□□ -0.9
IFT20-202ENST00000357896 TMEM242Q9NWH2 141 aa9.42□□□□□ -0.9
IFT20-202ENST00000357896 C7orf77A4D0Y5 90 aa9.41□□□□□ -0.9
IFT20-202ENST00000357896 UBE2BP63146 152 aa9.41□□□□□ -0.9
IFT20-202ENST00000357896 SMAGPQ0VAQ4 97 aa9.41□□□□□ -0.9
IFT20-202ENST00000357896 FAM19A5Q7Z5A7 132 aaPredicted RBP9.41□□□□□ -0.9
IFT20-202ENST00000357896 C5orf38Q86SI9 138 aa9.41□□□□□ -0.9
IFT20-202ENST00000357896 NUDT10Q8NFP7 164 aa9.41□□□□□ -0.9
IFT20-202ENST00000357896 OR10D4PQ8NGN7 298 aa9.41□□□□□ -0.9
IFT20-202ENST00000357896 NUDT11Q96G61 164 aa9.41□□□□□ -0.9
IFT20-202ENST00000357896 GNG13Q9P2W3 67 aa9.41□□□□□ -0.9
IFT20-202ENST00000357896 FOXA3P55318 350 aaPredicted RBP9.4□□□□□ -0.9
IFT20-202ENST00000357896 CSDC2Q9Y534 153 aaKnown RBP9.4□□□□□ -0.9
IFT20-202ENST00000357896 TRAV13-1A0A0B4J241 112 aa9.39□□□□□ -0.91
IFT20-202ENST00000357896 TLX1NBP0CAT3 122 aa9.39□□□□□ -0.91
IFT20-202ENST00000357896 TMEM241Q24JQ0 296 aa9.39□□□□□ -0.91
IFT20-202ENST00000357896 RPP21Q9H633 154 aaKnown RBP9.39□□□□□ -0.91
IFT20-202ENST00000357896 NDUFA1O15239 70 aa9.38□□□□□ -0.91
IFT20-202ENST00000357896 PDE6DO43924 150 aa9.38□□□□□ -0.91
IFT20-202ENST00000357896 TRBV20OR9-2A0A075B6H5 130 aa9.37□□□□□ -0.91
IFT20-202ENST00000357896 TRBV27A0A0K0K1C4 114 aa9.37□□□□□ -0.91
IFT20-202ENST00000357896 M0QXV9 152 aa9.37□□□□□ -0.91
IFT20-202ENST00000357896 ZNF861PO60384 105 aa9.37□□□□□ -0.91
IFT20-202ENST00000357896 POLR2KP53803 58 aaKnown RBP9.37□□□□□ -0.91
IFT20-202ENST00000357896 RNASE7Q9H1E1 156 aaKnown RBP9.37□□□□□ -0.91
IFT20-202ENST00000357896 A0A1B0GVG6 124 aa9.36□□□□□ -0.91
IFT20-202ENST00000357896 GAGE2EQ4V326 116 aa9.36□□□□□ -0.91
IFT20-202ENST00000357896 MED9Q9NWA0 146 aa9.36□□□□□ -0.91
IFT20-202ENST00000357896 GAGE2DQ9UEU5 116 aa9.36□□□□□ -0.91
IFT20-202ENST00000357896 FCER1GP30273 86 aa9.35□□□□□ -0.91
IFT20-202ENST00000357896 ORAOV1Q8WV07 137 aa9.35□□□□□ -0.91
IFT20-202ENST00000357896 CDIP1Q9H305 208 aa9.35□□□□□ -0.91
IFT20-202ENST00000357896 UBE2D4Q9Y2X8 147 aa9.35□□□□□ -0.91
IFT20-202ENST00000357896 TEX46H3BTG2 121 aa9.34□□□□□ -0.91
IFT20-202ENST00000357896 ZNF345Q14585 488 aa9.34□□□□□ -0.91
IFT20-202ENST00000357896 RNASE13Q5GAN3 156 aaKnown RBP9.34□□□□□ -0.91
IFT20-202ENST00000357896 SMDT1Q9H4I9 107 aa9.34□□□□□ -0.91
IFT20-202ENST00000357896 VCYO14598 125 aa9.33□□□□□ -0.92
IFT20-202ENST00000357896 KRTAP7-1Q8IUC3 87 aa9.33□□□□□ -0.92
IFT20-202ENST00000357896 hCG_2014768A0A024R1R8 64 aa9.32□□□□□ -0.92
IFT20-202ENST00000357896 C10orf25Q5T742 122 aa9.32□□□□□ -0.92
IFT20-202ENST00000357896 UNQ6190/PRO20217Q6UXQ8 127 aa9.32□□□□□ -0.92
IFT20-202ENST00000357896 TYMSOSQ8TAI1 123 aa9.32□□□□□ -0.92
IFT20-202ENST00000357896 C6orf48Q9UBA6 75 aa9.32□□□□□ -0.92
IFT20-202ENST00000357896 CRYGAP11844 174 aa9.31□□□□□ -0.92
IFT20-202ENST00000357896 BORCS7Q96B45 105 aa9.31□□□□□ -0.92
IFT20-202ENST00000357896 CRCT1Q9UGL9 99 aa9.31□□□□□ -0.92
IFT20-202ENST00000357896 KANTRA0A1W2PQU2 76 aa9.3□□□□□ -0.92
IFT20-202ENST00000357896 TPRXLQ17RH7 258 aa9.3□□□□□ -0.92
IFT20-202ENST00000357896 TMEM18Q96B42 140 aa9.3□□□□□ -0.92
IFT20-202ENST00000357896 KIR2DL4Q99706 377 aa9.3□□□□□ -0.92
IFT20-202ENST00000357896 TIMM21Q9BVV7 248 aa9.3□□□□□ -0.92
IFT20-202ENST00000357896 A0A087X002 238 aa9.29□□□□□ -0.92
IFT20-202ENST00000357896 IGHV3OR16-9A0A0B4J2B5 98 aa9.29□□□□□ -0.92
IFT20-202ENST00000357896 A8MWL6 223 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms