RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 CCKP06307 115 aa4.9□□□□□ -1.63
TRIM38-201ENST00000357085 IGLV5-39A0A0G2JS06 123 aa4.89□□□□□ -1.63
TRIM38-201ENST00000357085 F8WDY8 70 aa4.89□□□□□ -1.63
TRIM38-201ENST00000357085 C5orf38Q86SI9 138 aa4.89□□□□□ -1.63
TRIM38-201ENST00000357085 WFDC11Q8NEX6 87 aa4.89□□□□□ -1.63
TRIM38-201ENST00000357085 UBE2BP63146 152 aa4.89□□□□□ -1.63
TRIM38-201ENST00000357085 HOXD3P31249 432 aaPredicted RBP4.89□□□□□ -1.63
TRIM38-201ENST00000357085 C4orf26Q17RF5 130 aa4.89□□□□□ -1.63
TRIM38-201ENST00000357085 MRPL55Q7Z7F7 128 aaKnown RBP4.89□□□□□ -1.63
TRIM38-201ENST00000357085 DEFB124Q8NES8 71 aa4.89□□□□□ -1.63
TRIM38-201ENST00000357085 Q9HAA7 133 aa4.89□□□□□ -1.63
TRIM38-201ENST00000357085 ZFHX2Q9C0A1 2572 aaPredicted RBP4.89□□□□□ -1.63
TRIM38-201ENST00000357085 IGKV3OR2-268A0A0C4DH90 116 aa4.89□□□□□ -1.63
TRIM38-201ENST00000357085 LINC01548A6NM66 108 aa4.89□□□□□ -1.63
TRIM38-201ENST00000357085 LECT2O14960 151 aa4.89□□□□□ -1.63
TRIM38-201ENST00000357085 DOPEY1Q5JWR5 2465 aa4.89□□□□□ -1.63
TRIM38-201ENST00000357085 SONP18583 2426 aaKnown RBP4.89□□□□□ -1.63
TRIM38-201ENST00000357085 UBE2E2Q96LR5 201 aa4.88□□□□□ -1.63
TRIM38-201ENST00000357085 PKD1L2Q7Z442 2459 aa4.88□□□□□ -1.63
TRIM38-201ENST00000357085 IGHV3-11P01762 117 aa4.88□□□□□ -1.63
TRIM38-201ENST00000357085 C11orf21Q9P2W6 132 aa4.88□□□□□ -1.63
TRIM38-201ENST00000357085 FAM19A3Q7Z5A8 133 aa4.88□□□□□ -1.63
TRIM38-201ENST00000357085 Q8N9W7 124 aa4.88□□□□□ -1.63
TRIM38-201ENST00000357085 CCDC168Q8NDH2 2452 aa4.88□□□□□ -1.63
TRIM38-201ENST00000357085 RUSC1-AS1Q66K80 236 aa4.88□□□□□ -1.63
TRIM38-201ENST00000357085 RNASE3P12724 160 aaKnown RBP4.88□□□□□ -1.63
TRIM38-201ENST00000357085 ENHOQ6UWT2 76 aa4.88□□□□□ -1.63
TRIM38-201ENST00000357085 SPTBN4Q9H254 2564 aa4.87□□□□□ -1.63
TRIM38-201ENST00000357085 A0A087WZ39 114 aa4.87□□□□□ -1.63
TRIM38-201ENST00000357085 CRYGDP07320 174 aa4.87□□□□□ -1.63
TRIM38-201ENST00000357085 RPL35AP18077 110 aaKnown RBP4.87□□□□□ -1.63
TRIM38-201ENST00000357085 IGHV3OR16-10A0A075B7F0 116 aa4.87□□□□□ -1.63
TRIM38-201ENST00000357085 TRBV12-3P01733 135 aa4.87□□□□□ -1.63
TRIM38-201ENST00000357085 SMAD5-AS1Q9Y6J3 95 aa4.87□□□□□ -1.63
TRIM38-201ENST00000357085 CLPSL1A2RUU4 121 aa4.86□□□□□ -1.63
TRIM38-201ENST00000357085 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.86□□□□□ -1.63
TRIM38-201ENST00000357085 IGKV2-29A2NJV5 120 aaPredicted RBP4.86□□□□□ -1.63
TRIM38-201ENST00000357085 TMEM105Q8N8V8 129 aa4.86□□□□□ -1.63
TRIM38-201ENST00000357085 NBL1P41271 181 aa4.86□□□□□ -1.63
TRIM38-201ENST00000357085 TRBV7-6A0A0J9YX20 115 aa4.86□□□□□ -1.63
TRIM38-201ENST00000357085 UBE2D4Q9Y2X8 147 aa4.86□□□□□ -1.63
TRIM38-201ENST00000357085 CEMP1Q6PRD7 247 aaPredicted RBP4.86□□□□□ -1.63
TRIM38-201ENST00000357085 LOC110117498A0A087WWA1 95 aa4.86□□□□□ -1.63
TRIM38-201ENST00000357085 UBE2AP49459 152 aa4.86□□□□□ -1.63
TRIM38-201ENST00000357085 SIRPDQ9H106 197 aa4.86□□□□□ -1.63
TRIM38-201ENST00000357085 SPINK13Q1W4C9 94 aa4.86□□□□□ -1.63
TRIM38-201ENST00000357085 ABCA12Q86UK0 2595 aa4.86□□□□□ -1.63
TRIM38-201ENST00000357085 DEFB123Q8N688 67 aa4.85□□□□□ -1.63
TRIM38-201ENST00000357085 MIFP14174 115 aa4.85□□□□□ -1.63
TRIM38-201ENST00000357085 H3BUX3 64 aa4.85□□□□□ -1.63
TRIM38-201ENST00000357085 FAM19A4Q96LR4 140 aa4.85□□□□□ -1.63
TRIM38-201ENST00000357085 MSMPQ1L6U9 139 aa4.85□□□□□ -1.63
TRIM38-201ENST00000357085 DEFB114Q30KQ6 69 aa4.85□□□□□ -1.63
TRIM38-201ENST00000357085 LINC01356Q8N9X3 169 aa4.85□□□□□ -1.63
TRIM38-201ENST00000357085 LINC01560Q8TB33 94 aa4.85□□□□□ -1.63
TRIM38-201ENST00000357085 NCR3O14931 201 aa4.84□□□□□ -1.63
TRIM38-201ENST00000357085 G3V318 75 aa4.84□□□□□ -1.63
TRIM38-201ENST00000357085 DAD1P61803 113 aa4.84□□□□□ -1.63
TRIM38-201ENST00000357085 LYNX1G3V0Z9 82 aa4.84□□□□□ -1.63
TRIM38-201ENST00000357085 LYNX1P0DP58 116 aa4.84□□□□□ -1.63
TRIM38-201ENST00000357085 ADAMTSL4-AS1Q5T5F5 129 aa4.84□□□□□ -1.63
TRIM38-201ENST00000357085 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.84□□□□□ -1.63
TRIM38-201ENST00000357085 A0A087WVE0 104 aa4.84□□□□□ -1.63
TRIM38-201ENST00000357085 TRBV6-4A0A1B0GX49 114 aa4.84□□□□□ -1.64
TRIM38-201ENST00000357085 Q8IZM0 81 aa4.84□□□□□ -1.64
TRIM38-201ENST00000357085 K7EQG2 157 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 NREPQ16612 68 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 PRR9Q5T870 116 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 MPLKIPQ8TAP9 179 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 C4orf3Q8WVX3 66 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 CDKN2A-AS1Q9UH64 79 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 KLKP1Q107X0 134 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 XCL1P47992 114 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 XCL2Q9UBD3 114 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 LY6EQ16553 131 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 BEAN1Q3B7T3 259 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 MIR7-3HGQ8N6C7 128 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 IGHV3OR16-12A0A075B7B8 117 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 MSMBP08118 114 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 DIRC1Q969H9 104 aa4.83□□□□□ -1.64
TRIM38-201ENST00000357085 IGHV3-38A0A0C4DH36 116 aa4.82□□□□□ -1.64
TRIM38-201ENST00000357085 KIF25-AS1Q9Y6Z4 181 aa4.82□□□□□ -1.64
TRIM38-201ENST00000357085 SEM1Q6ZVN7 128 aa4.82□□□□□ -1.64
TRIM38-201ENST00000357085 NKAPP1Q8N9T2 125 aa4.82□□□□□ -1.64
TRIM38-201ENST00000357085 SMCR5Q8TEV8 140 aa4.82□□□□□ -1.64
TRIM38-201ENST00000357085 RMI2Q96E14 147 aa4.82□□□□□ -1.64
TRIM38-201ENST00000357085 ABCA2Q9BZC7 2435 aa4.82□□□□□ -1.64
TRIM38-201ENST00000357085 VPREB1P12018 145 aa4.82□□□□□ -1.64
TRIM38-201ENST00000357085 SNURFQ9Y675 71 aa4.82□□□□□ -1.64
TRIM38-201ENST00000357085 COX7BP24311 80 aa4.82□□□□□ -1.64
TRIM38-201ENST00000357085 Q8N814 137 aa4.81□□□□□ -1.64
TRIM38-201ENST00000357085 MTORP42345 2549 aa4.81□□□□□ -1.64
TRIM38-201ENST00000357085 BPY2O14599 106 aa4.81□□□□□ -1.64
TRIM38-201ENST00000357085 IGLV1-40P01703 118 aa4.81□□□□□ -1.64
TRIM38-201ENST00000357085 SMIM1B2RUZ4 78 aa4.81□□□□□ -1.64
TRIM38-201ENST00000357085 DHRS4-AS1Q9P1J3 65 aa4.81□□□□□ -1.64
TRIM38-201ENST00000357085 GNLYP22749 145 aa4.81□□□□□ -1.64
TRIM38-201ENST00000357085 NDUFS5O43920 106 aa4.8□□□□□ -1.64
TRIM38-201ENST00000357085 HIGD2BQ4VC39 106 aa4.8□□□□□ -1.64
TRIM38-201ENST00000357085 FN1P02751 2386 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms