RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 COX19Q49B96 90 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 Q6ZN92 141 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 SH2D6Q7Z4S9 175 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 ATP5L2Q7Z4Y8 100 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 URB1-AS1Q96HZ7 61 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 MRPL18Q9H0U6 180 aaKnown RBP2.76□□□□□ -1.97
LIG4-201ENST00000356922 MAP1LC3AQ9H492 121 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 LAMTOR2Q9Y2Q5 125 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 TRAV9-2A0A087WT02 112 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 SCGB1A1P11684 91 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 AMTP48728 403 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 UBE2D3P61077 147 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 UBE2D2P62837 147 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 PET117Q6UWS5 81 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 KRTAP1-5Q9BYS1 174 aa2.76□□□□□ -1.97
LIG4-201ENST00000356922 TRBV25-1A0A075B6N4 114 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 SDHAF1A6NFY7 115 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 PSCAO43653 123 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 IGHV3-30P01768 117 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 IGHV3-33P01772 117 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 CRPP02741 224 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 MT-ND6P03923 174 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 IGHV3-30-3P0DP02 117 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 IGHV3-30-5P0DP03 117 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 POLR2KP53803 58 aaKnown RBP2.75□□□□□ -1.97
LIG4-201ENST00000356922 GTF2H5Q6ZYL4 71 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 TMEM101Q96IK0 257 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 UQCR10Q9UDW1 63 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 TNFRSF6BO95407 300 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 WFDC10BQ8IUB3 73 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 MRAP2Q96G30 205 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 TMEM70Q9BUB7 260 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 GNB1LQ9BYB4 327 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 VCYO14598 125 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 NUPR1O60356 82 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 EIF4EBP3O60516 100 aaPredicted RBP2.75□□□□□ -1.97
LIG4-201ENST00000356922 CKS1BP61024 79 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 GAGE6Q13070 117 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 STPG4Q8N801 248 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 FAM104AQ969W3 186 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 Q9HAA7 133 aa2.75□□□□□ -1.97
LIG4-201ENST00000356922 TRAV9-1A0A075B6T8 112 aa2.74□□□□□ -1.97
LIG4-201ENST00000356922 TRBV10-1A0A0K0K1A3 114 aa2.74□□□□□ -1.97
LIG4-201ENST00000356922 HINT1P49773 126 aaPredicted RBP2.74□□□□□ -1.97
LIG4-201ENST00000356922 LINC00310P59036 64 aa2.74□□□□□ -1.97
LIG4-201ENST00000356922 SMAGPQ0VAQ4 97 aa2.74□□□□□ -1.97
LIG4-201ENST00000356922 GTSF1LQ9H1H1 148 aa2.74□□□□□ -1.97
LIG4-201ENST00000356922 H3BNG1 76 aa2.74□□□□□ -1.97
LIG4-201ENST00000356922 I3L3M4 83 aa2.74□□□□□ -1.97
LIG4-201ENST00000356922 TSHBP01222 138 aa2.74□□□□□ -1.97
LIG4-201ENST00000356922 ANGP03950 147 aaKnown RBP2.74□□□□□ -1.97
LIG4-201ENST00000356922 IFI27P40305 119 aaPredicted RBP2.74□□□□□ -1.97
LIG4-201ENST00000356922 SUMO2P61956 95 aaKnown RBP2.74□□□□□ -1.97
LIG4-201ENST00000356922 COA6Q5JTJ3 125 aaKnown RBP2.74□□□□□ -1.97
LIG4-201ENST00000356922 DAZ4Q86SG3 579 aaKnown RBP2.74□□□□□ -1.97
LIG4-201ENST00000356922 Q8N976 141 aa2.74□□□□□ -1.97
LIG4-201ENST00000356922 SIGMAR1Q99720 223 aa2.74□□□□□ -1.97
LIG4-201ENST00000356922 DAZ3Q9NR90 486 aaKnown RBP2.74□□□□□ -1.97
LIG4-201ENST00000356922 IGHV1-24A0A0C4DH33 117 aa2.74□□□□□ -1.97
LIG4-201ENST00000356922 HSBP1O75506 76 aa2.74□□□□□ -1.97
LIG4-201ENST00000356922 TMEM243Q9BU79 118 aa2.74□□□□□ -1.97
LIG4-201ENST00000356922 TRBV27A0A0K0K1C4 114 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 SIVA1O15304 175 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 RPL39P62891 51 aaKnown RBP2.73□□□□□ -1.97
LIG4-201ENST00000356922 TMEM97Q5BJF2 176 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 CLPSL2Q6UWE3 100 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.73□□□□□ -1.97
LIG4-201ENST00000356922 TRBV6-5A0A0K0K1A5 114 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 IGKV2-29A2NJV5 120 aaPredicted RBP2.73□□□□□ -1.97
LIG4-201ENST00000356922 J3QR89 54 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 TCTAP57738 103 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 PMCHL1Q16048 86 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 C18orf32Q8TCD1 76 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 LINC00476Q8WZB0 136 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 UBE2WQ96B02 151 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 OPRPNQ99935 248 aaPredicted RBP2.73□□□□□ -1.97
LIG4-201ENST00000356922 CHCHD7Q9BUK0 85 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 Q9H8V8 135 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 IGLV4-60A0A075B6I1 120 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 A0A096LNJ9 63 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 TRBV6-8A0A0A6YYG3 113 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 ESDP10768 282 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 SPATA45Q537H7 98 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 OR5A1Q8NGJ0 315 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 HERV-K104P63124 156 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 ZC2HC1BQ5TFG8 222 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 NXT2Q9NPJ8 142 aaKnown RBP2.73□□□□□ -1.97
LIG4-201ENST00000356922 KLK12Q9UKR0 248 aa2.73□□□□□ -1.97
LIG4-201ENST00000356922 LRP1BQ9NZR2 4599 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 DYNC1H1Q14204 4646 aaKnown RBP2.72□□□□□ -1.97
LIG4-201ENST00000356922 IGKV2D-24A0A075B6R9 120 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 PRSS1P07477 247 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 MPV17L2Q567V2 206 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 TEX43Q6ZNM6 134 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 AP5S1Q9NUS5 200 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 GAGE10A6NGK3 116 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 KRTDAPP60985 99 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 RNASE13Q5GAN3 156 aaKnown RBP2.72□□□□□ -1.97
LIG4-201ENST00000356922 Q6ZVH6 145 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 C20orf78Q9BR46 151 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms