RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 LINC00269Q8N2A0 174 aa10.74□□□□□ -0.69
FDPS-201ENST00000356657 CCL25O15444 150 aa10.73□□□□□ -0.69
FDPS-201ENST00000356657 MRPS36P82909 103 aaKnown RBP10.73□□□□□ -0.69
FDPS-201ENST00000356657 C2orf66Q6UXQ4 117 aa10.73□□□□□ -0.69
FDPS-201ENST00000356657 Q6ZRN7 208 aaPredicted RBP10.73□□□□□ -0.69
FDPS-201ENST00000356657 C1orf43Q9BWL3 253 aa10.73□□□□□ -0.69
FDPS-201ENST00000356657 Q9HAA7 133 aa10.73□□□□□ -0.69
FDPS-201ENST00000356657 CDC42SE2Q9NRR3 84 aa10.73□□□□□ -0.69
FDPS-201ENST00000356657 RTL8CO15255 209 aa10.72□□□□□ -0.69
FDPS-201ENST00000356657 LINC00614P0C842 121 aa10.72□□□□□ -0.69
FDPS-201ENST00000356657 ENHOQ6UWT2 76 aa10.72□□□□□ -0.69
FDPS-201ENST00000356657 ZNF664Q8N3J9 261 aa10.72□□□□□ -0.69
FDPS-201ENST00000356657 DNAH2Q9P225 4427 aa10.71□□□□□ -0.69
FDPS-201ENST00000356657 PSCAO43653 123 aa10.71□□□□□ -0.69
FDPS-201ENST00000356657 RPL39P62891 51 aaKnown RBP10.71□□□□□ -0.69
FDPS-201ENST00000356657 PAPPA-AS1Q5QFB9 102 aa10.71□□□□□ -0.69
FDPS-201ENST00000356657 CHCHD1Q96BP2 118 aaKnown RBP10.71□□□□□ -0.69
FDPS-201ENST00000356657 TMA7Q9Y2S6 64 aaKnown RBP10.71□□□□□ -0.69
FDPS-201ENST00000356657 TOMM6Q96B49 74 aa10.7□□□□□ -0.7
FDPS-201ENST00000356657 FRAS1Q86XX4 4008 aa10.7□□□□□ -0.7
FDPS-201ENST00000356657 IGKV2D-24A0A075B6R9 120 aa10.69□□□□□ -0.7
FDPS-201ENST00000356657 TIMM17AQ99595 171 aa10.69□□□□□ -0.7
FDPS-201ENST00000356657 Q6ZN92 141 aa10.68□□□□□ -0.7
FDPS-201ENST00000356657 ERASQ7Z444 233 aa10.68□□□□□ -0.7
FDPS-201ENST00000356657 BAGE3Q86Y29 109 aa10.68□□□□□ -0.7
FDPS-201ENST00000356657 TMEM141Q96I45 108 aa10.68□□□□□ -0.7
FDPS-201ENST00000356657 PRSS29PA6NIE9 313 aa10.67□□□□□ -0.7
FDPS-201ENST00000356657 EREGO14944 169 aa10.67□□□□□ -0.7
FDPS-201ENST00000356657 HBDP02042 147 aa10.67□□□□□ -0.7
FDPS-201ENST00000356657 CLPSL2Q6UWE3 100 aa10.67□□□□□ -0.7
FDPS-201ENST00000356657 Q6ZUT4 128 aa10.67□□□□□ -0.7
FDPS-201ENST00000356657 DNAH10Q8IVF4 4471 aa10.66□□□□□ -0.7
FDPS-201ENST00000356657 IGIPA6NJ69 53 aa10.66□□□□□ -0.7
FDPS-201ENST00000356657 C1orf196B1AJZ1 125 aa10.66□□□□□ -0.7
FDPS-201ENST00000356657 SS18Q15532 418 aa10.66□□□□□ -0.7
FDPS-201ENST00000356657 URB1-AS1Q96HZ7 61 aa10.66□□□□□ -0.7
FDPS-201ENST00000356657 IGLV4-3A0A075B6K6 122 aa10.65□□□□□ -0.7
FDPS-201ENST00000356657 TEX43Q6ZNM6 134 aa10.65□□□□□ -0.7
FDPS-201ENST00000356657 C2orf88Q9BSF0 95 aa10.65□□□□□ -0.7
FDPS-201ENST00000356657 LINC00959A0A1B0GUT2 108 aa10.64□□□□□ -0.71
FDPS-201ENST00000356657 SCGB3A1Q96QR1 104 aa10.64□□□□□ -0.71
FDPS-201ENST00000356657 HSBP1O75506 76 aa10.63□□□□□ -0.71
FDPS-201ENST00000356657 VCX2Q9H322 139 aa10.63□□□□□ -0.71
FDPS-201ENST00000356657 DNAH17Q9UFH2 4485 aa10.63□□□□□ -0.71
FDPS-201ENST00000356657 IGKV3OR2-268A0A0C4DH90 116 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.62□□□□□ -0.71
FDPS-201ENST00000356657 HIST1H2BKO60814 126 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 HIST1H2BJP06899 126 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 HIST1H2BOP23527 126 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 HIST1H2BBP33778 126 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 HIST1H2BDP58876 126 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 HIST1H2BCP62807 126 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 TNP2Q05952 138 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 HIST2H2BEQ16778 126 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 C14orf177Q52M58 125 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.62□□□□□ -0.71
FDPS-201ENST00000356657 CHCHD10Q8WYQ3 142 aaPredicted RBP10.62□□□□□ -0.71
FDPS-201ENST00000356657 HIST1H2BHQ93079 126 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 FAM104AQ969W3 186 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 HIST1H2BNQ99877 126 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 HIST1H2BMQ99879 126 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 BIRC6Q9NR09 4857 aa10.62□□□□□ -0.71
FDPS-201ENST00000356657 IGLV10-54A0A075B6I4 117 aa10.61□□□□□ -0.71
FDPS-201ENST00000356657 IFITM10A6NMD0 228 aa10.61□□□□□ -0.71
FDPS-201ENST00000356657 ATP5LO75964 103 aa10.61□□□□□ -0.71
FDPS-201ENST00000356657 KRTAP26-1Q6PEX3 210 aa10.61□□□□□ -0.71
FDPS-201ENST00000356657 CD164L2Q6UWJ8 174 aa10.61□□□□□ -0.71
FDPS-201ENST00000356657 AMELXQ99217 191 aa10.61□□□□□ -0.71
FDPS-201ENST00000356657 FAT2Q9NYQ8 4349 aa10.61□□□□□ -0.71
FDPS-201ENST00000356657 A0A087WTM6 91 aa10.61□□□□□ -0.71
FDPS-201ENST00000356657 A0A096LNJ9 63 aa10.61□□□□□ -0.71
FDPS-201ENST00000356657 SEC11AP67812 179 aa10.61□□□□□ -0.71
FDPS-201ENST00000356657 TRAV13-1A0A0B4J241 112 aa10.6□□□□□ -0.71
FDPS-201ENST00000356657 LRCOL1A6NCL2 159 aa10.6□□□□□ -0.71
FDPS-201ENST00000356657 PDZD11Q5EBL8 140 aa10.6□□□□□ -0.71
FDPS-201ENST00000356657 SERF1AO75920 110 aa10.59□□□□□ -0.71
FDPS-201ENST00000356657 RNASE13Q5GAN3 156 aaKnown RBP10.59□□□□□ -0.71
FDPS-201ENST00000356657 CFAP161Q6P656 301 aa10.59□□□□□ -0.71
FDPS-201ENST00000356657 OPRPNQ99935 248 aaPredicted RBP10.59□□□□□ -0.71
FDPS-201ENST00000356657 GAGE12HA6NDE8 117 aa10.58□□□□□ -0.72
FDPS-201ENST00000356657 XCL1P47992 114 aa10.58□□□□□ -0.72
FDPS-201ENST00000356657 FAM19A3Q7Z5A8 133 aa10.58□□□□□ -0.72
FDPS-201ENST00000356657 MAPKAPK5-AS1Q8N8E1 139 aa10.58□□□□□ -0.72
FDPS-201ENST00000356657 NTN5Q8WTR8 489 aaPredicted RBP10.58□□□□□ -0.72
FDPS-201ENST00000356657 FOXI1Q12951 378 aa10.57□□□□□ -0.72
FDPS-201ENST00000356657 COA6Q5JTJ3 125 aaKnown RBP10.57□□□□□ -0.72
FDPS-201ENST00000356657 CDPF1Q6NVV7 123 aa10.57□□□□□ -0.72
FDPS-201ENST00000356657 LINC00173Q6ZV60 143 aa10.57□□□□□ -0.72
FDPS-201ENST00000356657 HECTD4Q9Y4D8 3996 aa10.57□□□□□ -0.72
FDPS-201ENST00000356657 A0A1B0GVY2 172 aa10.56□□□□□ -0.72
FDPS-201ENST00000356657 UBE2D1P51668 147 aa10.56□□□□□ -0.72
FDPS-201ENST00000356657 PMVKQ15126 192 aa10.56□□□□□ -0.72
FDPS-201ENST00000356657 PMCHL1Q16048 86 aa10.56□□□□□ -0.72
FDPS-201ENST00000356657 BAALCQ8WXS3 180 aa10.56□□□□□ -0.72
FDPS-201ENST00000356657 LINC00310P59036 64 aa10.55□□□□□ -0.72
FDPS-201ENST00000356657 Q8N814 137 aa10.55□□□□□ -0.72
FDPS-201ENST00000356657 PACRGQ96M98 296 aaPredicted RBP10.55□□□□□ -0.72
FDPS-201ENST00000356657 PGPEP1Q9NXJ5 209 aa10.55□□□□□ -0.72
FDPS-201ENST00000356657 USP17L23D6RBM5 183 aa10.55□□□□□ -0.72
FDPS-201ENST00000356657 COX7A2LO14548 114 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms