RNA–Protein interactions for RNA: ENST00000356205.8

SLC39A1-202, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-202ENST00000356205 LEPROTO15243 131 aa11.71□□□□□ -0.53
SLC39A1-202ENST00000356205 SMCPP49901 116 aaPredicted RBP11.71□□□□□ -0.53
SLC39A1-202ENST00000356205 SBSPONQ8IVN8 264 aa11.71□□□□□ -0.53
SLC39A1-202ENST00000356205 KIR2DL5BQ8NHK3 375 aa11.71□□□□□ -0.53
SLC39A1-202ENST00000356205 TMEM223A0PJW6 202 aa11.71□□□□□ -0.54
SLC39A1-202ENST00000356205 APOC4P55056 127 aa11.71□□□□□ -0.54
SLC39A1-202ENST00000356205 FOXI1Q12951 378 aa11.71□□□□□ -0.54
SLC39A1-202ENST00000356205 C10orf126Q8N4M7 172 aa11.71□□□□□ -0.54
SLC39A1-202ENST00000356205 C20orf203Q8NBC4 194 aa11.71□□□□□ -0.54
SLC39A1-202ENST00000356205 C16orf74Q96GX8 76 aa11.71□□□□□ -0.54
SLC39A1-202ENST00000356205 APOMO95445 188 aa11.7□□□□□ -0.54
SLC39A1-202ENST00000356205 TMEM170BQ5T4T1 132 aa11.7□□□□□ -0.54
SLC39A1-202ENST00000356205 CFC1BP0CG36 223 aa11.69□□□□□ -0.54
SLC39A1-202ENST00000356205 CFC1P0CG37 223 aa11.69□□□□□ -0.54
SLC39A1-202ENST00000356205 P0DMU3 169 aa11.69□□□□□ -0.54
SLC39A1-202ENST00000356205 FAM231AP0DMU4 169 aa11.69□□□□□ -0.54
SLC39A1-202ENST00000356205 FAM231CP0DMU5 169 aa11.69□□□□□ -0.54
SLC39A1-202ENST00000356205 CRYBA4P53673 196 aa11.69□□□□□ -0.54
SLC39A1-202ENST00000356205 KRTAP10-11P60412 298 aa11.69□□□□□ -0.54
SLC39A1-202ENST00000356205 ZNF56Q15929 161 aa11.69□□□□□ -0.54
SLC39A1-202ENST00000356205 FAM74A4Q5TZK3 123 aa11.69□□□□□ -0.54
SLC39A1-202ENST00000356205 A8MWV9 139 aa11.69□□□□□ -0.54
SLC39A1-202ENST00000356205 I3L3M4 83 aa11.69□□□□□ -0.54
SLC39A1-202ENST00000356205 IGHV4-30-4P0DP06 118 aa11.68□□□□□ -0.54
SLC39A1-202ENST00000356205 LGALS3P17931 250 aaKnown RBP11.68□□□□□ -0.54
SLC39A1-202ENST00000356205 EMP1P54849 157 aa11.68□□□□□ -0.54
SLC39A1-202ENST00000356205 GTSF1LQ9H1H1 148 aa11.68□□□□□ -0.54
SLC39A1-202ENST00000356205 PYGO1Q9Y3Y4 419 aa11.68□□□□□ -0.54
SLC39A1-202ENST00000356205 M0QXV9 152 aa11.67□□□□□ -0.54
SLC39A1-202ENST00000356205 ZNF22P17026 224 aaPredicted RBP11.66□□□□□ -0.54
SLC39A1-202ENST00000356205 DAZ2Q13117 558 aaKnown RBP11.66□□□□□ -0.54
SLC39A1-202ENST00000356205 VCX2Q9H322 139 aa11.66□□□□□ -0.54
SLC39A1-202ENST00000356205 PRO1854Q9UHT4 67 aa11.66□□□□□ -0.54
SLC39A1-202ENST00000356205 A0A0B4J2C4 111 aa11.66□□□□□ -0.54
SLC39A1-202ENST00000356205 LOC107984156A0A0G2JMH3 177 aa11.66□□□□□ -0.54
SLC39A1-202ENST00000356205 PLAC8L1A1L4L8 177 aa11.66□□□□□ -0.54
SLC39A1-202ENST00000356205 RHODO00212 210 aa11.66□□□□□ -0.54
SLC39A1-202ENST00000356205 PSMB2P49721 201 aa11.66□□□□□ -0.54
SLC39A1-202ENST00000356205 ARL17AQ8IVW1 177 aa11.66□□□□□ -0.54
SLC39A1-202ENST00000356205 MTURNQ8N3F0 131 aa11.66□□□□□ -0.54
SLC39A1-202ENST00000356205 IGLV4-3A0A075B6K6 122 aa11.65□□□□□ -0.54
SLC39A1-202ENST00000356205 TRGV1A0A0A0MS02 117 aa11.65□□□□□ -0.54
SLC39A1-202ENST00000356205 TEN1Q86WV5 123 aa11.65□□□□□ -0.54
SLC39A1-202ENST00000356205 TCL1BO95988 128 aa11.64□□□□□ -0.55
SLC39A1-202ENST00000356205 SMIM9A6NGZ8 99 aa11.64□□□□□ -0.55
SLC39A1-202ENST00000356205 RS1O15537 224 aa11.64□□□□□ -0.55
SLC39A1-202ENST00000356205 SMAGPQ0VAQ4 97 aa11.64□□□□□ -0.55
SLC39A1-202ENST00000356205 PPDPFLQ8WWR9 84 aa11.64□□□□□ -0.55
SLC39A1-202ENST00000356205 NOP10Q9NPE3 64 aaKnown RBP11.64□□□□□ -0.55
SLC39A1-202ENST00000356205 X6R8D5 127 aa11.63□□□□□ -0.55
SLC39A1-202ENST00000356205 DNAH3Q8TD57 4116 aa11.63□□□□□ -0.55
SLC39A1-202ENST00000356205 DEFB135Q30KP9 77 aa11.63□□□□□ -0.55
SLC39A1-202ENST00000356205 Q6ZTI0 123 aa11.63□□□□□ -0.55
SLC39A1-202ENST00000356205 LINC01600Q96MT4 127 aa11.63□□□□□ -0.55
SLC39A1-202ENST00000356205 OVOL2Q9BRP0 275 aa11.63□□□□□ -0.55
SLC39A1-202ENST00000356205 A8MZ25 164 aa11.62□□□□□ -0.55
SLC39A1-202ENST00000356205 MRPS36P82909 103 aaKnown RBP11.62□□□□□ -0.55
SLC39A1-202ENST00000356205 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.61□□□□□ -0.55
SLC39A1-202ENST00000356205 IGHV3-73A0A0B4J1V6 119 aa11.61□□□□□ -0.55
SLC39A1-202ENST00000356205 CIDEAO60543 219 aa11.61□□□□□ -0.55
SLC39A1-202ENST00000356205 IGHV3-33P01772 117 aa11.61□□□□□ -0.55
SLC39A1-202ENST00000356205 OPRPNQ99935 248 aaPredicted RBP11.61□□□□□ -0.55
SLC39A1-202ENST00000356205 CDIP1Q9H305 208 aa11.61□□□□□ -0.55
SLC39A1-202ENST00000356205 A4D1N5 150 aa11.61□□□□□ -0.55
SLC39A1-202ENST00000356205 FAM104AQ969W3 186 aa11.61□□□□□ -0.55
SLC39A1-202ENST00000356205 NACAE9PAV3 2078 aa11.6□□□□□ -0.55
SLC39A1-202ENST00000356205 DEFB104AQ8WTQ1 72 aa11.6□□□□□ -0.55
SLC39A1-202ENST00000356205 TRAV4A0A0B4J268 109 aa11.59□□□□□ -0.55
SLC39A1-202ENST00000356205 EIF4EBP3O60516 100 aaPredicted RBP11.59□□□□□ -0.55
SLC39A1-202ENST00000356205 PKD1L1Q8TDX9 2849 aa11.59□□□□□ -0.55
SLC39A1-202ENST00000356205 CARD19Q96LW7 228 aa11.59□□□□□ -0.55
SLC39A1-202ENST00000356205 A0A0J9YXV3 536 aa11.59□□□□□ -0.55
SLC39A1-202ENST00000356205 A0A0J9YXY3 114 aa11.58□□□□□ -0.56
SLC39A1-202ENST00000356205 A0A1B0GV72 72 aa11.58□□□□□ -0.56
SLC39A1-202ENST00000356205 GAGE7O76087 117 aa11.58□□□□□ -0.56
SLC39A1-202ENST00000356205 IGHV3-53P01767 116 aa11.58□□□□□ -0.56
SLC39A1-202ENST00000356205 GAGE12FP0CL80 117 aa11.58□□□□□ -0.56
SLC39A1-202ENST00000356205 GAGE12GP0CL81 117 aa11.58□□□□□ -0.56
SLC39A1-202ENST00000356205 GAGE12IP0CL82 117 aa11.58□□□□□ -0.56
SLC39A1-202ENST00000356205 RNF183Q96D59 192 aa11.58□□□□□ -0.56
SLC39A1-202ENST00000356205 MUSTN1Q8IVN3 82 aa11.57□□□□□ -0.56
SLC39A1-202ENST00000356205 SPANXA1Q9NS26 97 aa11.57□□□□□ -0.56
SLC39A1-202ENST00000356205 ERG28Q9UKR5 140 aa11.57□□□□□ -0.56
SLC39A1-202ENST00000356205 TRGV2A0A075B6R0 118 aa11.56□□□□□ -0.56
SLC39A1-202ENST00000356205 IGHV3-30-3P0DP02 117 aa11.56□□□□□ -0.56
SLC39A1-202ENST00000356205 SFTA2Q6UW10 78 aa11.56□□□□□ -0.56
SLC39A1-202ENST00000356205 Q6ZSN1 163 aa11.56□□□□□ -0.56
SLC39A1-202ENST00000356205 LITAFQ99732 161 aa11.56□□□□□ -0.56
SLC39A1-202ENST00000356205 SPANXDQ9BXN6 97 aa11.56□□□□□ -0.56
SLC39A1-202ENST00000356205 SPANXCQ9NY87 97 aa11.56□□□□□ -0.56
SLC39A1-202ENST00000356205 IGHV1-58A0A0C4DH39 117 aa11.56□□□□□ -0.56
SLC39A1-202ENST00000356205 MIFP14174 115 aa11.56□□□□□ -0.56
SLC39A1-202ENST00000356205 TIMM21Q9BVV7 248 aa11.56□□□□□ -0.56
SLC39A1-202ENST00000356205 TINCRA0A1B0GVN0 87 aa11.55□□□□□ -0.56
SLC39A1-202ENST00000356205 SCGB1C2P0DMR2 95 aa11.55□□□□□ -0.56
SLC39A1-202ENST00000356205 IGHV4-28A0A0C4DH34 117 aa11.55□□□□□ -0.56
SLC39A1-202ENST00000356205 TRBV30A0A0K0K1B3 111 aa11.55□□□□□ -0.56
SLC39A1-202ENST00000356205 LINC00612Q8N6U2 182 aa11.55□□□□□ -0.56
SLC39A1-202ENST00000356205 DNAJC30Q96LL9 226 aa11.55□□□□□ -0.56
SLC39A1-202ENST00000356205 Q8NAQ8 132 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms