RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 UBE2D4Q9Y2X8 147 aa9.5□□□□□ -0.89
HOXA1-202ENST00000355633 TRBV6-8A0A0A6YYG3 113 aa9.49□□□□□ -0.89
HOXA1-202ENST00000355633 TRAV12-1A0A0B4J245 112 aa9.49□□□□□ -0.89
HOXA1-202ENST00000355633 MRPL23Q16540 153 aaKnown RBP9.49□□□□□ -0.89
HOXA1-202ENST00000355633 TMEM243Q9BU79 118 aa9.49□□□□□ -0.89
HOXA1-202ENST00000355633 SPANXA1Q9NS26 97 aa9.49□□□□□ -0.89
HOXA1-202ENST00000355633 ICOSQ9Y6W8 199 aa9.49□□□□□ -0.89
HOXA1-202ENST00000355633 A0A087WX48 190 aa9.49□□□□□ -0.89
HOXA1-202ENST00000355633 VAMP8Q9BV40 100 aa9.49□□□□□ -0.89
HOXA1-202ENST00000355633 IGLV4-3A0A075B6K6 122 aa9.48□□□□□ -0.89
HOXA1-202ENST00000355633 CEMP1Q6PRD7 247 aaPredicted RBP9.48□□□□□ -0.89
HOXA1-202ENST00000355633 OPRPNQ99935 248 aaPredicted RBP9.48□□□□□ -0.89
HOXA1-202ENST00000355633 DNHD1Q96M86 4753 aa9.48□□□□□ -0.89
HOXA1-202ENST00000355633 TENM3Q9P273 2699 aa9.48□□□□□ -0.89
HOXA1-202ENST00000355633 DEFB131BA0A096LNP1 70 aa9.48□□□□□ -0.89
HOXA1-202ENST00000355633 PRSS29PA6NIE9 313 aa9.48□□□□□ -0.89
HOXA1-202ENST00000355633 UBE2L6O14933 153 aa9.48□□□□□ -0.89
HOXA1-202ENST00000355633 PMVKQ15126 192 aa9.48□□□□□ -0.89
HOXA1-202ENST00000355633 PAPPA-AS1Q5QFB9 102 aa9.48□□□□□ -0.89
HOXA1-202ENST00000355633 TIMM21Q9BVV7 248 aa9.48□□□□□ -0.89
HOXA1-202ENST00000355633 H3BNG1 76 aa9.47□□□□□ -0.89
HOXA1-202ENST00000355633 SH2D6Q7Z4S9 175 aa9.47□□□□□ -0.89
HOXA1-202ENST00000355633 MRPL35Q9NZE8 188 aaKnown RBP9.47□□□□□ -0.89
HOXA1-202ENST00000355633 PAM16Q9Y3D7 125 aa9.47□□□□□ -0.89
HOXA1-202ENST00000355633 COX11Q9Y6N1 276 aa9.47□□□□□ -0.89
HOXA1-202ENST00000355633 H7C423 109 aa9.46□□□□□ -0.89
HOXA1-202ENST00000355633 K7ERU9 68 aa9.46□□□□□ -0.89
HOXA1-202ENST00000355633 FGF6P10767 208 aa9.46□□□□□ -0.89
HOXA1-202ENST00000355633 SMAGPQ0VAQ4 97 aa9.46□□□□□ -0.89
HOXA1-202ENST00000355633 ZC2HC1BQ5TFG8 222 aa9.46□□□□□ -0.89
HOXA1-202ENST00000355633 DGAT2L7PQ6IED9 249 aa9.46□□□□□ -0.89
HOXA1-202ENST00000355633 VCX2Q9H322 139 aa9.46□□□□□ -0.89
HOXA1-202ENST00000355633 HUWE1Q7Z6Z7 4374 aaKnown RBP9.46□□□□□ -0.89
HOXA1-202ENST00000355633 TRAV9-2A0A087WT02 112 aa9.46□□□□□ -0.9
HOXA1-202ENST00000355633 F8VRH5 84 aa9.46□□□□□ -0.9
HOXA1-202ENST00000355633 DPM2O94777 84 aa9.46□□□□□ -0.9
HOXA1-202ENST00000355633 CHCHD5Q9BSY4 110 aa9.46□□□□□ -0.9
HOXA1-202ENST00000355633 CST9LQ9H4G1 147 aa9.46□□□□□ -0.9
HOXA1-202ENST00000355633 TRAV10A0A0B4J240 114 aa9.45□□□□□ -0.9
HOXA1-202ENST00000355633 IGKCP01834 107 aa9.45□□□□□ -0.9
HOXA1-202ENST00000355633 NHLRC4P0CG21 123 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-202ENST00000355633 OCIAD2Q56VL3 154 aa9.45□□□□□ -0.9
HOXA1-202ENST00000355633 AMMECR1LQ6DCA0 310 aa9.45□□□□□ -0.9
HOXA1-202ENST00000355633 Q6ZUT4 128 aa9.45□□□□□ -0.9
HOXA1-202ENST00000355633 FAM104AQ969W3 186 aa9.45□□□□□ -0.9
HOXA1-202ENST00000355633 CSDC2Q9Y534 153 aaKnown RBP9.45□□□□□ -0.9
HOXA1-202ENST00000355633 hDV102S1A0JD36 115 aa9.44□□□□□ -0.9
HOXA1-202ENST00000355633 UQCR10Q9UDW1 63 aa9.44□□□□□ -0.9
HOXA1-202ENST00000355633 PLNP26678 52 aa9.44□□□□□ -0.9
HOXA1-202ENST00000355633 MRPS36P82909 103 aaKnown RBP9.44□□□□□ -0.9
HOXA1-202ENST00000355633 GAGE6Q13070 117 aa9.44□□□□□ -0.9
HOXA1-202ENST00000355633 SPATA45Q537H7 98 aa9.44□□□□□ -0.9
HOXA1-202ENST00000355633 RNASE13Q5GAN3 156 aaKnown RBP9.44□□□□□ -0.9
HOXA1-202ENST00000355633 AMELXQ99217 191 aa9.44□□□□□ -0.9
HOXA1-202ENST00000355633 OR5A1Q8NGJ0 315 aa9.43□□□□□ -0.9
HOXA1-202ENST00000355633 TMEM101Q96IK0 257 aa9.43□□□□□ -0.9
HOXA1-202ENST00000355633 IGLV4-69A0A075B6H9 119 aa9.42□□□□□ -0.9
HOXA1-202ENST00000355633 STPG4Q8N801 248 aa9.42□□□□□ -0.9
HOXA1-202ENST00000355633 HNRNPA3P51991 378 aaKnown RBP9.41□□□□□ -0.9
HOXA1-202ENST00000355633 CDC42SE2Q9NRR3 84 aa9.41□□□□□ -0.9
HOXA1-202ENST00000355633 TMEM262E9PQX1 116 aa9.41□□□□□ -0.9
HOXA1-202ENST00000355633 LELP1Q5T871 98 aa9.41□□□□□ -0.9
HOXA1-202ENST00000355633 LYPD5Q6UWN5 251 aa9.4□□□□□ -0.9
HOXA1-202ENST00000355633 DNAH9Q9NYC9 4486 aa9.4□□□□□ -0.9
HOXA1-202ENST00000355633 C11orf86A6NJI1 115 aa9.39□□□□□ -0.91
HOXA1-202ENST00000355633 MRPS16Q9Y3D3 137 aaKnown RBP9.39□□□□□ -0.91
HOXA1-202ENST00000355633 IGLV4-60A0A075B6I1 120 aa9.39□□□□□ -0.91
HOXA1-202ENST00000355633 TIRAPP58753 221 aa9.39□□□□□ -0.91
HOXA1-202ENST00000355633 A0A0J9YXV3 536 aa9.38□□□□□ -0.91
HOXA1-202ENST00000355633 IGLC3P0DOY3 106 aa9.38□□□□□ -0.91
HOXA1-202ENST00000355633 SCGB1A1P11684 91 aa9.38□□□□□ -0.91
HOXA1-202ENST00000355633 NFE4Q86UQ8 179 aa9.38□□□□□ -0.91
HOXA1-202ENST00000355633 C15orf53Q8NAA6 179 aa9.38□□□□□ -0.91
HOXA1-202ENST00000355633 CHAC1Q9BUX1 264 aa9.38□□□□□ -0.91
HOXA1-202ENST00000355633 A0A1B0GUV1 79 aa9.38□□□□□ -0.91
HOXA1-202ENST00000355633 UBE2D1P51668 147 aa9.38□□□□□ -0.91
HOXA1-202ENST00000355633 TCTAP57738 103 aa9.38□□□□□ -0.91
HOXA1-202ENST00000355633 MPV17L2Q567V2 206 aa9.38□□□□□ -0.91
HOXA1-202ENST00000355633 VAMP3Q15836 100 aa9.37□□□□□ -0.91
HOXA1-202ENST00000355633 TMEM170BQ5T4T1 132 aa9.36□□□□□ -0.91
HOXA1-202ENST00000355633 TRAV8-6A0A0B4J262 113 aa9.36□□□□□ -0.91
HOXA1-202ENST00000355633 A0A1B0GV72 72 aa9.36□□□□□ -0.91
HOXA1-202ENST00000355633 TRAV13-1A0A0B4J241 112 aa9.35□□□□□ -0.91
HOXA1-202ENST00000355633 TINCRA0A1B0GVN0 87 aa9.35□□□□□ -0.91
HOXA1-202ENST00000355633 IGLL5B9A064 214 aa9.35□□□□□ -0.91
HOXA1-202ENST00000355633 ESRGQ1W209 222 aa9.35□□□□□ -0.91
HOXA1-202ENST00000355633 ZNF22P17026 224 aaPredicted RBP9.34□□□□□ -0.91
HOXA1-202ENST00000355633 GEMIN7Q9H840 131 aaKnown RBP9.34□□□□□ -0.91
HOXA1-202ENST00000355633 NMUP48645 174 aa9.34□□□□□ -0.91
HOXA1-202ENST00000355633 SEC11AP67812 179 aa9.34□□□□□ -0.91
HOXA1-202ENST00000355633 COL7A1Q02388 2944 aa9.33□□□□□ -0.92
HOXA1-202ENST00000355633 IGKV2D-26A0A0A0MRZ7 120 aa9.33□□□□□ -0.92
HOXA1-202ENST00000355633 IGKV3OR2-268A0A0C4DH90 116 aa9.33□□□□□ -0.92
HOXA1-202ENST00000355633 HERVK_113P61574 105 aa9.33□□□□□ -0.92
HOXA1-202ENST00000355633 FAM19A3Q7Z5A8 133 aa9.33□□□□□ -0.92
HOXA1-202ENST00000355633 LINC00242Q5T6M2 205 aa9.32□□□□□ -0.92
HOXA1-202ENST00000355633 Q8N3U1 123 aa9.32□□□□□ -0.92
HOXA1-202ENST00000355633 E9PLD3 99 aa9.32□□□□□ -0.92
HOXA1-202ENST00000355633 ANGP03950 147 aaKnown RBP9.32□□□□□ -0.92
HOXA1-202ENST00000355633 COX8AP10176 69 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms