RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 TRBV6-8A0A0A6YYG3 113 aa4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 ODF3Q96PU9 254 aa4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 NUP210Q8TEM1 1887 aaPredicted RBP4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 TRAV10A0A0B4J240 114 aa4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 LY6LH3BQJ8 138 aa4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 FAM30AQ9NZY2 134 aa4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 PRYO14603 147 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 LOXL1Q08397 574 aaPredicted RBP4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 FAM19A3Q7Z5A8 133 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 ZNF106Q9H2Y7 1883 aaKnown RBP4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 DEFB114Q30KQ6 69 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 IGF2-ASQ6U949 168 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 E7EUB6 86 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 DHRS4-AS1Q9P1J3 65 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 SIP14410 1827 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 SPATA12Q7Z6I5 190 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 WFDC13Q8IUB5 93 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 CDKN2A-AS1Q9UH64 79 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 C6orf99Q4VX62 202 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 SERP2Q8N6R1 65 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 SPRY4Q9C004 299 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 NEXN-AS1Q8NBZ9 246 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 RNASE8Q8TDE3 154 aaKnown RBP4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 NAV2Q8IVL1 2488 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 ATG2AQ2TAZ0 1938 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 SHISA2Q6UWI4 295 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 MT-ATP8P03928 68 aa4.35□□□□□ -1.71
SRGAP1-201ENST00000355086 RETNQ9HD89 108 aa4.34□□□□□ -1.71
SRGAP1-201ENST00000355086 TNFRSF13BO14836 293 aaPredicted RBP4.34□□□□□ -1.71
SRGAP1-201ENST00000355086 IGLV1-47P01700 117 aa4.34□□□□□ -1.71
SRGAP1-201ENST00000355086 KRTAP27-1Q3LI81 207 aa4.34□□□□□ -1.71
SRGAP1-201ENST00000355086 C19orf71A6NCJ1 209 aa4.34□□□□□ -1.71
SRGAP1-201ENST00000355086 LRRK2Q5S007 2527 aa4.34□□□□□ -1.71
SRGAP1-201ENST00000355086 ACANP16112 2415 aa4.34□□□□□ -1.71
SRGAP1-201ENST00000355086 PRR4Q16378 134 aa4.34□□□□□ -1.71
SRGAP1-201ENST00000355086 TMEM223A0PJW6 202 aa4.34□□□□□ -1.72
SRGAP1-201ENST00000355086 LINC00308Q8TCZ7 52 aa4.34□□□□□ -1.72
SRGAP1-201ENST00000355086 X6R8D5 127 aa4.34□□□□□ -1.72
SRGAP1-201ENST00000355086 TRBV6-5A0A0K0K1A5 114 aa4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 Q6YL49 198 aa4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 PLAC8L1A1L4L8 177 aa4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 JMJD1CQ15652 2540 aa4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 IGLV4-3A0A075B6K6 122 aa4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 TRIAP1O43715 76 aa4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 CFAP126Q5VTH2 177 aa4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 KPRPQ5T749 579 aaPredicted RBP4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 LINC00474Q9P2X8 69 aa4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 M0R378 163 aa4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 RPL37AP8A6NKH3 93 aa4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 C10orf25Q5T742 122 aa4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 TRBV27A0A0K0K1C4 114 aa4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 CCDC140Q96MF4 163 aa4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 IGLV4-69A0A075B6H9 119 aa4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 BBC3Q96PG8 261 aaPredicted RBP4.33□□□□□ -1.72
SRGAP1-201ENST00000355086 LINC00482Q8N8I6 264 aa4.32□□□□□ -1.72
SRGAP1-201ENST00000355086 TLN1Q9Y490 2541 aaKnown RBP4.32□□□□□ -1.72
SRGAP1-201ENST00000355086 Q8N976 141 aa4.32□□□□□ -1.72
SRGAP1-201ENST00000355086 CIRBP-AS1Q8TBR5 109 aa4.32□□□□□ -1.72
SRGAP1-201ENST00000355086 TIMM17BO60830 172 aa4.32□□□□□ -1.72
SRGAP1-201ENST00000355086 LOC107984640A0A0U1RRK4 108 aa4.32□□□□□ -1.72
SRGAP1-201ENST00000355086 ZNF22P17026 224 aaPredicted RBP4.32□□□□□ -1.72
SRGAP1-201ENST00000355086 IGLV2-14P01704 120 aa4.32□□□□□ -1.72
SRGAP1-201ENST00000355086 ZNF80P51504 273 aaPredicted RBP4.32□□□□□ -1.72
SRGAP1-201ENST00000355086 CD164L2Q6UWJ8 174 aa4.32□□□□□ -1.72
SRGAP1-201ENST00000355086 LRRC75A-AS1Q8N1F1 130 aa4.31□□□□□ -1.72
SRGAP1-201ENST00000355086 C20orf173Q96LM9 149 aa4.31□□□□□ -1.72
SRGAP1-201ENST00000355086 K7EQG2 157 aa4.31□□□□□ -1.72
SRGAP1-201ENST00000355086 PIEZO2Q9H5I5 2752 aa4.31□□□□□ -1.72
SRGAP1-201ENST00000355086 LELP1Q5T871 98 aa4.31□□□□□ -1.72
SRGAP1-201ENST00000355086 Q6ZQY7 126 aa4.31□□□□□ -1.72
SRGAP1-201ENST00000355086 TRBV6-4A0A1B0GX49 114 aa4.31□□□□□ -1.72
SRGAP1-201ENST00000355086 THSD7BQ9C0I4 1608 aa4.31□□□□□ -1.72
SRGAP1-201ENST00000355086 TRBV30A0A0K0K1B3 111 aa4.31□□□□□ -1.72
SRGAP1-201ENST00000355086 FRMD6-AS1P0C7T7 363 aa4.31□□□□□ -1.72
SRGAP1-201ENST00000355086 LINC00526Q96FQ7 95 aa4.31□□□□□ -1.72
SRGAP1-201ENST00000355086 LTBP1Q14766 1721 aa4.31□□□□□ -1.72
SRGAP1-201ENST00000355086 C22orf34Q6ZV56 151 aa4.31□□□□□ -1.72
SRGAP1-201ENST00000355086 A0A1B0GXF2 115 aa4.3□□□□□ -1.72
SRGAP1-201ENST00000355086 IGF1P05019 195 aa4.3□□□□□ -1.72
SRGAP1-201ENST00000355086 FBXL19-AS1Q494R0 122 aa4.3□□□□□ -1.72
SRGAP1-201ENST00000355086 CLUHP3Q96NS8 147 aa4.3□□□□□ -1.72
SRGAP1-201ENST00000355086 LOC100131303A0A0U1RQF7 123 aa4.3□□□□□ -1.72
SRGAP1-201ENST00000355086 TANC1Q9C0D5 1861 aa4.3□□□□□ -1.72
SRGAP1-201ENST00000355086 NUPR2A6NF83 97 aa4.3□□□□□ -1.72
SRGAP1-201ENST00000355086 PROK1P58294 105 aa4.3□□□□□ -1.72
SRGAP1-201ENST00000355086 WFDC10AQ9H1F0 79 aa4.3□□□□□ -1.72
SRGAP1-201ENST00000355086 WDR87Q6ZQQ6 2873 aa4.3□□□□□ -1.72
SRGAP1-201ENST00000355086 ESRGQ1W209 222 aa4.3□□□□□ -1.72
SRGAP1-201ENST00000355086 ZNF462Q96JM2 2506 aa4.3□□□□□ -1.72
SRGAP1-201ENST00000355086 C1orf195Q5TG92 126 aa4.3□□□□□ -1.72
SRGAP1-201ENST00000355086 Q6ZSV7 163 aa4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 PLA2G2EQ9NZK7 142 aa4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 ODF3BA8MYP8 253 aa4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 CEP192Q8TEP8 1941 aa4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 M0QY20 66 aa4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 RPL28P46779 137 aaKnown RBP4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 COX17Q14061 63 aa4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 NDUFA7O95182 113 aa4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 MRPS12O15235 138 aaKnown RBP4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 LMO4P61968 165 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms