RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PEMTQ9UBM1 199 aa6.92□□□□□ -1.3
SMG6-202ENST00000354901 SDHAF1A6NFY7 115 aa6.92□□□□□ -1.3
SMG6-202ENST00000354901 ADAMTSL4-AS1Q5T5F5 129 aa6.92□□□□□ -1.3
SMG6-202ENST00000354901 DPH3Q96FX2 82 aa6.92□□□□□ -1.3
SMG6-202ENST00000354901 TRBV30A0A0K0K1B3 111 aa6.92□□□□□ -1.3
SMG6-202ENST00000354901 PFN2P35080 140 aa6.92□□□□□ -1.3
SMG6-202ENST00000354901 DAZ2Q13117 558 aaKnown RBP6.92□□□□□ -1.3
SMG6-202ENST00000354901 DAZ4Q86SG3 579 aaKnown RBP6.92□□□□□ -1.3
SMG6-202ENST00000354901 LINC00643Q86TS7 51 aa6.92□□□□□ -1.3
SMG6-202ENST00000354901 DAZ3Q9NR90 486 aaKnown RBP6.92□□□□□ -1.3
SMG6-202ENST00000354901 HIST2H2BDQ6DRA6 164 aa6.91□□□□□ -1.3
SMG6-202ENST00000354901 FAM19A4Q96LR4 140 aa6.91□□□□□ -1.3
SMG6-202ENST00000354901 AMELXQ99217 191 aa6.91□□□□□ -1.3
SMG6-202ENST00000354901 Q9HAA7 133 aa6.91□□□□□ -1.3
SMG6-202ENST00000354901 SPINK13Q1W4C9 94 aa6.91□□□□□ -1.3
SMG6-202ENST00000354901 ZNF843Q8N446 348 aa6.91□□□□□ -1.3
SMG6-202ENST00000354901 MXRA5Q9NR99 2828 aa6.91□□□□□ -1.3
SMG6-202ENST00000354901 SYNJ2BPP57105 145 aa6.91□□□□□ -1.3
SMG6-202ENST00000354901 DEFB112Q30KQ8 113 aa6.91□□□□□ -1.3
SMG6-202ENST00000354901 TIMM21Q9BVV7 248 aa6.91□□□□□ -1.3
SMG6-202ENST00000354901 PRO0628Q9UI54 55 aa6.91□□□□□ -1.3
SMG6-202ENST00000354901 EPG5Q9HCE0 2579 aa6.9□□□□□ -1.3
SMG6-202ENST00000354901 RNF223E7ERA6 249 aa6.9□□□□□ -1.3
SMG6-202ENST00000354901 LST1O00453 97 aa6.9□□□□□ -1.3
SMG6-202ENST00000354901 LEPROTO15243 131 aa6.9□□□□□ -1.3
SMG6-202ENST00000354901 SUMO4Q6EEV6 95 aa6.9□□□□□ -1.3
SMG6-202ENST00000354901 NDUFA12Q9UI09 145 aa6.9□□□□□ -1.3
SMG6-202ENST00000354901 PYGO1Q9Y3Y4 419 aa6.9□□□□□ -1.3
SMG6-202ENST00000354901 C1orf195Q5TG92 126 aa6.9□□□□□ -1.31
SMG6-202ENST00000354901 LINC00336Q6ZUF6 198 aa6.9□□□□□ -1.31
SMG6-202ENST00000354901 TEX15Q9BXT5 2789 aa6.9□□□□□ -1.31
SMG6-202ENST00000354901 IGHV3-30-3P0DP02 117 aa6.89□□□□□ -1.31
SMG6-202ENST00000354901 IGHV3-73A0A0B4J1V6 119 aa6.89□□□□□ -1.31
SMG6-202ENST00000354901 IGIPA6NJ69 53 aa6.89□□□□□ -1.31
SMG6-202ENST00000354901 RPS28P62857 69 aaKnown RBP6.89□□□□□ -1.31
SMG6-202ENST00000354901 DCANP1Q8TF63 244 aa6.89□□□□□ -1.31
SMG6-202ENST00000354901 DNAL4O96015 105 aa6.89□□□□□ -1.31
SMG6-202ENST00000354901 IGLV1-40P01703 118 aa6.89□□□□□ -1.31
SMG6-202ENST00000354901 PRM2P04554 102 aa6.89□□□□□ -1.31
SMG6-202ENST00000354901 BAALC-AS2P0C853 105 aa6.89□□□□□ -1.31
SMG6-202ENST00000354901 FAM240AA0A1B0GVK7 77 aa6.88□□□□□ -1.31
SMG6-202ENST00000354901 ATOX1O00244 68 aa6.88□□□□□ -1.31
SMG6-202ENST00000354901 MALP21145 153 aa6.88□□□□□ -1.31
SMG6-202ENST00000354901 ZNF876PQ49A33 203 aa6.88□□□□□ -1.31
SMG6-202ENST00000354901 B4DSR2 109 aa6.88□□□□□ -1.31
SMG6-202ENST00000354901 CD28P10747 220 aa6.88□□□□□ -1.31
SMG6-202ENST00000354901 JMJD1CQ15652 2540 aa6.88□□□□□ -1.31
SMG6-202ENST00000354901 TIRAPP58753 221 aa6.88□□□□□ -1.31
SMG6-202ENST00000354901 LINC00315P59091 139 aa6.88□□□□□ -1.31
SMG6-202ENST00000354901 DEFB136Q30KP8 78 aa6.88□□□□□ -1.31
SMG6-202ENST00000354901 WFDC9Q8NEX5 89 aa6.88□□□□□ -1.31
SMG6-202ENST00000354901 KLLNB2CW77 178 aa6.87□□□□□ -1.31
SMG6-202ENST00000354901 H3BUA1 57 aa6.87□□□□□ -1.31
SMG6-202ENST00000354901 VCYO14598 125 aa6.87□□□□□ -1.31
SMG6-202ENST00000354901 TMEM258P61165 79 aa6.87□□□□□ -1.31
SMG6-202ENST00000354901 KIF25-AS1Q9Y6Z4 181 aa6.87□□□□□ -1.31
SMG6-202ENST00000354901 FBN2P35556 2912 aa6.87□□□□□ -1.31
SMG6-202ENST00000354901 SNRPD3P62318 126 aaKnown RBP6.86□□□□□ -1.31
SMG6-202ENST00000354901 KHDC1LQ5JSQ8 128 aa6.86□□□□□ -1.31
SMG6-202ENST00000354901 TMEM141Q96I45 108 aa6.86□□□□□ -1.31
SMG6-202ENST00000354901 BBC3Q96PG8 261 aaPredicted RBP6.86□□□□□ -1.31
SMG6-202ENST00000354901 IMUPQ9GZP8 106 aa6.86□□□□□ -1.31
SMG6-202ENST00000354901 C14orf132Q9NPU4 83 aa6.86□□□□□ -1.31
SMG6-202ENST00000354901 KNCNA6PVL3 124 aa6.86□□□□□ -1.31
SMG6-202ENST00000354901 PRB1P04280 392 aa6.86□□□□□ -1.31
SMG6-202ENST00000354901 CRYGAP11844 174 aa6.86□□□□□ -1.31
SMG6-202ENST00000354901 PSMB8P28062 276 aa6.86□□□□□ -1.31
SMG6-202ENST00000354901 C2orf48Q96LS8 159 aa6.86□□□□□ -1.31
SMG6-202ENST00000354901 IGHV4OR15-8A0A075B7B6 117 aa6.85□□□□□ -1.31
SMG6-202ENST00000354901 A0A087WW49 117 aa6.85□□□□□ -1.31
SMG6-202ENST00000354901 SPANXCQ9NY87 97 aa6.85□□□□□ -1.31
SMG6-202ENST00000354901 PPP1R17O96001 155 aa6.85□□□□□ -1.31
SMG6-202ENST00000354901 POLR2KP53803 58 aaKnown RBP6.85□□□□□ -1.31
SMG6-202ENST00000354901 A0A0J9YX75 114 aa6.85□□□□□ -1.31
SMG6-202ENST00000354901 ACYP1P07311 99 aa6.85□□□□□ -1.31
SMG6-202ENST00000354901 MED14OSP0DP75 135 aa6.85□□□□□ -1.31
SMG6-202ENST00000354901 RPL18AQ02543 176 aaKnown RBP6.85□□□□□ -1.31
SMG6-202ENST00000354901 CFHR3Q02985 330 aa6.85□□□□□ -1.31
SMG6-202ENST00000354901 APRG1Q8IVJ8 170 aa6.85□□□□□ -1.31
SMG6-202ENST00000354901 TMEM61Q8N0U2 210 aa6.85□□□□□ -1.31
SMG6-202ENST00000354901 TMEM243Q9BU79 118 aa6.85□□□□□ -1.31
SMG6-202ENST00000354901 CHD6Q8TD26 2715 aa6.85□□□□□ -1.31
SMG6-202ENST00000354901 MTORP42345 2549 aa6.85□□□□□ -1.31
SMG6-202ENST00000354901 NF1P21359 2839 aa6.85□□□□□ -1.31
SMG6-202ENST00000354901 IGHV3-16A0A0C4DH30 117 aa6.84□□□□□ -1.31
SMG6-202ENST00000354901 A0A1W2PRX2 142 aa6.84□□□□□ -1.31
SMG6-202ENST00000354901 C18orf65Q6ZTR6 163 aa6.84□□□□□ -1.31
SMG6-202ENST00000354901 C20orf197Q8N268 126 aa6.84□□□□□ -1.31
SMG6-202ENST00000354901 TRAV23DV6A0A075B6W5 121 aa6.84□□□□□ -1.31
SMG6-202ENST00000354901 S100A7L2Q5SY68 101 aa6.84□□□□□ -1.31
SMG6-202ENST00000354901 Q5XG85 94 aa6.84□□□□□ -1.31
SMG6-202ENST00000354901 IL17DQ8TAD2 202 aa6.84□□□□□ -1.31
SMG6-202ENST00000354901 ACANP16112 2415 aa6.84□□□□□ -1.31
SMG6-202ENST00000354901 IGHV1OR15-1A0A075B7D0 117 aa6.84□□□□□ -1.32
SMG6-202ENST00000354901 K7EMT4 169 aa6.84□□□□□ -1.32
SMG6-202ENST00000354901 PROK1P58294 105 aa6.84□□□□□ -1.32
SMG6-202ENST00000354901 HILS1P60008 231 aa6.84□□□□□ -1.32
SMG6-202ENST00000354901 TIMM17AQ99595 171 aa6.84□□□□□ -1.32
SMG6-202ENST00000354901 RETNQ9HD89 108 aa6.83□□□□□ -1.32
SMG6-202ENST00000354901 USP17L23D6RBM5 183 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms