RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 OVOL1O14753 267 aa7.44□□□□□ -1.22
SYNE1-203ENST00000354674 LGALS3P17931 250 aaKnown RBP7.44□□□□□ -1.22
SYNE1-203ENST00000354674 ZNF575Q86XF7 245 aa7.44□□□□□ -1.22
SYNE1-203ENST00000354674 LINC00526Q96FQ7 95 aa7.44□□□□□ -1.22
SYNE1-203ENST00000354674 DPH3Q96FX2 82 aa7.44□□□□□ -1.22
SYNE1-203ENST00000354674 CCL24O00175 119 aa7.44□□□□□ -1.22
SYNE1-203ENST00000354674 LINC00336Q6ZUF6 198 aa7.44□□□□□ -1.22
SYNE1-203ENST00000354674 NRACQ8N912 160 aa7.44□□□□□ -1.22
SYNE1-203ENST00000354674 C11orf21Q9P2W6 132 aa7.44□□□□□ -1.22
SYNE1-203ENST00000354674 TRBV6-1A0A0K0K1D8 114 aa7.43□□□□□ -1.22
SYNE1-203ENST00000354674 WIPF1O43516 503 aa7.43□□□□□ -1.22
SYNE1-203ENST00000354674 PSMG4Q5JS54 123 aa7.43□□□□□ -1.22
SYNE1-203ENST00000354674 MRPL53Q96EL3 112 aaKnown RBP7.43□□□□□ -1.22
SYNE1-203ENST00000354674 JPT2Q9H910 190 aa7.43□□□□□ -1.22
SYNE1-203ENST00000354674 PEMTQ9UBM1 199 aa7.43□□□□□ -1.22
SYNE1-203ENST00000354674 TMEM263Q8WUH6 116 aaKnown RBP7.43□□□□□ -1.22
SYNE1-203ENST00000354674 A0A1B0GX51 115 aa7.43□□□□□ -1.22
SYNE1-203ENST00000354674 A0A1W2PRX2 142 aa7.43□□□□□ -1.22
SYNE1-203ENST00000354674 SLC25A29Q8N8R3 303 aa7.42□□□□□ -1.22
SYNE1-203ENST00000354674 NIPBLQ6KC79 2804 aaeCLIP7.42□□□□□ -1.22
SYNE1-203ENST00000354674 J3QQQ9 107 aa7.42□□□□□ -1.22
SYNE1-203ENST00000354674 COX7CP15954 63 aa7.42□□□□□ -1.22
SYNE1-203ENST00000354674 DCANP1Q8TF63 244 aa7.42□□□□□ -1.22
SYNE1-203ENST00000354674 SMIM2Q9BVW6 85 aa7.42□□□□□ -1.22
SYNE1-203ENST00000354674 C2CD3Q4AC94 2353 aa7.42□□□□□ -1.22
SYNE1-203ENST00000354674 A8MZ25 164 aa7.41□□□□□ -1.22
SYNE1-203ENST00000354674 Q5XG85 94 aa7.41□□□□□ -1.22
SYNE1-203ENST00000354674 PYGO1Q9Y3Y4 419 aa7.41□□□□□ -1.22
SYNE1-203ENST00000354674 NOTCH3Q9UM47 2321 aa7.41□□□□□ -1.22
SYNE1-203ENST00000354674 IGKV3D-20A0A0C4DH25 116 aa7.41□□□□□ -1.22
SYNE1-203ENST00000354674 DEFB1P60022 68 aa7.41□□□□□ -1.22
SYNE1-203ENST00000354674 TP53TG1Q9Y2A0 90 aa7.41□□□□□ -1.22
SYNE1-203ENST00000354674 FAM236DA0A1B0GTK5 79 aa7.41□□□□□ -1.22
SYNE1-203ENST00000354674 CRYGDP07320 174 aa7.41□□□□□ -1.22
SYNE1-203ENST00000354674 FAM236CP0DP71 79 aa7.41□□□□□ -1.22
SYNE1-203ENST00000354674 TINCRA0A1B0GVN0 87 aa7.4□□□□□ -1.22
SYNE1-203ENST00000354674 ZNRF2Q8NHG8 242 aa7.4□□□□□ -1.22
SYNE1-203ENST00000354674 C20orf173Q96LM9 149 aa7.4□□□□□ -1.22
SYNE1-203ENST00000354674 PRIMA1Q86XR5 153 aa7.4□□□□□ -1.23
SYNE1-203ENST00000354674 C16orf92Q96LL3 132 aa7.4□□□□□ -1.23
SYNE1-203ENST00000354674 TRBV7-7A0A0K0K1E9 115 aa7.39□□□□□ -1.23
SYNE1-203ENST00000354674 SUMO2P61956 95 aaKnown RBP7.39□□□□□ -1.23
SYNE1-203ENST00000354674 KRTAP24-1Q3LI83 254 aa7.39□□□□□ -1.23
SYNE1-203ENST00000354674 RNASE13Q5GAN3 156 aaKnown RBP7.39□□□□□ -1.23
SYNE1-203ENST00000354674 K7EQG2 157 aa7.39□□□□□ -1.23
SYNE1-203ENST00000354674 NXPH4O95158 308 aa7.39□□□□□ -1.23
SYNE1-203ENST00000354674 COX8CQ7Z4L0 72 aa7.39□□□□□ -1.23
SYNE1-203ENST00000354674 ICOSQ9Y6W8 199 aa7.39□□□□□ -1.23
SYNE1-203ENST00000354674 DEFB114Q30KQ6 69 aa7.38□□□□□ -1.23
SYNE1-203ENST00000354674 SPANXA1Q9NS26 97 aa7.38□□□□□ -1.23
SYNE1-203ENST00000354674 C2orf48Q96LS8 159 aa7.38□□□□□ -1.23
SYNE1-203ENST00000354674 IGLV4-69A0A075B6H9 119 aa7.38□□□□□ -1.23
SYNE1-203ENST00000354674 SEC61GP60059 68 aa7.38□□□□□ -1.23
SYNE1-203ENST00000354674 RPL11P62913 178 aaKnown RBP7.38□□□□□ -1.23
SYNE1-203ENST00000354674 TRAV12-1A0A0B4J245 112 aa7.37□□□□□ -1.23
SYNE1-203ENST00000354674 TSHBP01222 138 aa7.37□□□□□ -1.23
SYNE1-203ENST00000354674 S100A4P26447 101 aaKnown RBP7.37□□□□□ -1.23
SYNE1-203ENST00000354674 C9orf47Q6ZRZ4 202 aa7.37□□□□□ -1.23
SYNE1-203ENST00000354674 TOMM6Q96B49 74 aa7.37□□□□□ -1.23
SYNE1-203ENST00000354674 IGKV3-7A0A075B6H7 116 aa7.37□□□□□ -1.23
SYNE1-203ENST00000354674 F5H697 171 aa7.37□□□□□ -1.23
SYNE1-203ENST00000354674 PFN2P35080 140 aa7.37□□□□□ -1.23
SYNE1-203ENST00000354674 LINC00482Q8N8I6 264 aa7.37□□□□□ -1.23
SYNE1-203ENST00000354674 WFDC9Q8NEX5 89 aa7.37□□□□□ -1.23
SYNE1-203ENST00000354674 ZNF625Q96I27 306 aaPredicted RBP7.37□□□□□ -1.23
SYNE1-203ENST00000354674 I3L3M4 83 aa7.36□□□□□ -1.23
SYNE1-203ENST00000354674 COX6CP09669 75 aa7.36□□□□□ -1.23
SYNE1-203ENST00000354674 TMEM61Q8N0U2 210 aa7.36□□□□□ -1.23
SYNE1-203ENST00000354674 HIST1H4AP62805 103 aaKnown RBP7.36□□□□□ -1.23
SYNE1-203ENST00000354674 ORMDL2Q53FV1 153 aa7.36□□□□□ -1.23
SYNE1-203ENST00000354674 ADAMTSL4-AS1Q5T5F5 129 aa7.36□□□□□ -1.23
SYNE1-203ENST00000354674 AGPAT4-IT1Q9H0P7 198 aa7.36□□□□□ -1.23
SYNE1-203ENST00000354674 FBN1P35555 2871 aaKnown RBP7.35□□□□□ -1.23
SYNE1-203ENST00000354674 A0A087WWL8 130 aa7.35□□□□□ -1.23
SYNE1-203ENST00000354674 TMEM223A0PJW6 202 aa7.35□□□□□ -1.23
SYNE1-203ENST00000354674 FAM74A4Q5TZK3 123 aa7.35□□□□□ -1.23
SYNE1-203ENST00000354674 DYNLRB2Q8TF09 96 aa7.35□□□□□ -1.23
SYNE1-203ENST00000354674 BRK1Q8WUW1 75 aa7.35□□□□□ -1.23
SYNE1-203ENST00000354674 Q9HAA7 133 aa7.35□□□□□ -1.23
SYNE1-203ENST00000354674 P0DMU3 169 aa7.34□□□□□ -1.23
SYNE1-203ENST00000354674 FAM231AP0DMU4 169 aa7.34□□□□□ -1.23
SYNE1-203ENST00000354674 FAM231CP0DMU5 169 aa7.34□□□□□ -1.23
SYNE1-203ENST00000354674 DPH3P1Q9H4G8 78 aa7.34□□□□□ -1.23
SYNE1-203ENST00000354674 LENEPQ9Y5L5 61 aa7.34□□□□□ -1.23
SYNE1-203ENST00000354674 TENM1Q9UKZ4 2725 aa7.34□□□□□ -1.23
SYNE1-203ENST00000354674 A0A0J9YXV3 536 aa7.34□□□□□ -1.23
SYNE1-203ENST00000354674 IGLV1-51P01701 117 aa7.34□□□□□ -1.23
SYNE1-203ENST00000354674 SNRPD3P62318 126 aaKnown RBP7.34□□□□□ -1.23
SYNE1-203ENST00000354674 DAZ2Q13117 558 aaKnown RBP7.34□□□□□ -1.23
SYNE1-203ENST00000354674 DAZ4Q86SG3 579 aaKnown RBP7.34□□□□□ -1.23
SYNE1-203ENST00000354674 DAZ3Q9NR90 486 aaKnown RBP7.34□□□□□ -1.23
SYNE1-203ENST00000354674 ZNF415Q09FC8 603 aa7.34□□□□□ -1.23
SYNE1-203ENST00000354674 AMELXQ99217 191 aa7.34□□□□□ -1.23
SYNE1-203ENST00000354674 MAST4O15021 2626 aa7.33□□□□□ -1.24
SYNE1-203ENST00000354674 LINC01546A6NGU7 62 aa7.33□□□□□ -1.24
SYNE1-203ENST00000354674 PF4P02776 101 aa7.33□□□□□ -1.24
SYNE1-203ENST00000354674 IL17DQ8TAD2 202 aa7.33□□□□□ -1.24
SYNE1-203ENST00000354674 CRYGAP11844 174 aa7.33□□□□□ -1.24
SYNE1-203ENST00000354674 LINC00643Q86TS7 51 aa7.33□□□□□ -1.24
SYNE1-203ENST00000354674 LINC01559Q495D7 138 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms