RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 SMCPP49901 116 aaPredicted RBP11.61□□□□□ -0.55
SRPK1-201ENST00000346162 NRACQ8N912 160 aa11.61□□□□□ -0.55
SRPK1-201ENST00000346162 PRO0461Q9UI25 63 aa11.61□□□□□ -0.55
SRPK1-201ENST00000346162 SPTSSBQ8NFR3 76 aa11.6□□□□□ -0.55
SRPK1-201ENST00000346162 A0A096LPF7 62 aa11.6□□□□□ -0.55
SRPK1-201ENST00000346162 WFDC9Q8NEX5 89 aa11.6□□□□□ -0.55
SRPK1-201ENST00000346162 PRRC2CQ9Y520 2896 aaKnown RBP11.6□□□□□ -0.55
SRPK1-201ENST00000346162 APOC4P55056 127 aa11.6□□□□□ -0.55
SRPK1-201ENST00000346162 MIR7-3HGQ8N6C7 128 aa11.6□□□□□ -0.55
SRPK1-201ENST00000346162 DEFB121Q5J5C9 76 aa11.6□□□□□ -0.55
SRPK1-201ENST00000346162 ATP5EP2Q5VTU8 51 aa11.59□□□□□ -0.55
SRPK1-201ENST00000346162 COL5A1P20908 1838 aaPredicted RBP11.59□□□□□ -0.55
SRPK1-201ENST00000346162 ABCA12Q86UK0 2595 aa11.59□□□□□ -0.55
SRPK1-201ENST00000346162 SNURFQ9Y675 71 aa11.59□□□□□ -0.55
SRPK1-201ENST00000346162 H3BQ85 93 aa11.59□□□□□ -0.55
SRPK1-201ENST00000346162 C5orf38Q86SI9 138 aa11.58□□□□□ -0.56
SRPK1-201ENST00000346162 SMAD5-AS1Q9Y6J3 95 aa11.58□□□□□ -0.56
SRPK1-201ENST00000346162 TMEM256-PLSCR3K7ERE1 68 aa11.58□□□□□ -0.56
SRPK1-201ENST00000346162 NCR3O14931 201 aa11.57□□□□□ -0.56
SRPK1-201ENST00000346162 CDSNQ15517 529 aa11.57□□□□□ -0.56
SRPK1-201ENST00000346162 Q8N6K4 173 aa11.57□□□□□ -0.56
SRPK1-201ENST00000346162 LINC00308Q8TCZ7 52 aa11.57□□□□□ -0.56
SRPK1-201ENST00000346162 ANGP03950 147 aaKnown RBP11.56□□□□□ -0.56
SRPK1-201ENST00000346162 EXPH5Q8NEV8 1989 aa11.56□□□□□ -0.56
SRPK1-201ENST00000346162 CLPSL2Q6UWE3 100 aa11.55□□□□□ -0.56
SRPK1-201ENST00000346162 A0A087WVE0 104 aa11.55□□□□□ -0.56
SRPK1-201ENST00000346162 PRO0628Q9UI54 55 aa11.55□□□□□ -0.56
SRPK1-201ENST00000346162 JMJD1CQ15652 2540 aa11.55□□□□□ -0.56
SRPK1-201ENST00000346162 FUSP35637 526 aaKnown RBP eCLIP11.55□□□□□ -0.56
SRPK1-201ENST00000346162 NREPQ16612 68 aa11.54□□□□□ -0.56
SRPK1-201ENST00000346162 ODF3Q96PU9 254 aa11.54□□□□□ -0.56
SRPK1-201ENST00000346162 ZFYVE26Q68DK2 2539 aa11.54□□□□□ -0.56
SRPK1-201ENST00000346162 ZNF561-AS1K7EIQ3 104 aa11.54□□□□□ -0.56
SRPK1-201ENST00000346162 PDE6GP18545 87 aa11.54□□□□□ -0.56
SRPK1-201ENST00000346162 CDKN2A-AS1Q9UH64 79 aa11.54□□□□□ -0.56
SRPK1-201ENST00000346162 SERP1Q9Y6X1 66 aa11.54□□□□□ -0.56
SRPK1-201ENST00000346162 SLPIP03973 132 aa11.54□□□□□ -0.56
SRPK1-201ENST00000346162 C16orf74Q96GX8 76 aa11.54□□□□□ -0.56
SRPK1-201ENST00000346162 K7EQD1 137 aa11.54□□□□□ -0.56
SRPK1-201ENST00000346162 SEC61GP60059 68 aa11.54□□□□□ -0.56
SRPK1-201ENST00000346162 IGLV4-3A0A075B6K6 122 aa11.53□□□□□ -0.56
SRPK1-201ENST00000346162 XCL1P47992 114 aa11.53□□□□□ -0.56
SRPK1-201ENST00000346162 C4orf3Q8WVX3 66 aa11.53□□□□□ -0.56
SRPK1-201ENST00000346162 K7EQG2 157 aa11.53□□□□□ -0.56
SRPK1-201ENST00000346162 CNFNQ9BYD5 112 aa11.53□□□□□ -0.56
SRPK1-201ENST00000346162 ZFAND2AQ8N6M9 145 aa11.52□□□□□ -0.56
SRPK1-201ENST00000346162 PIK3CD-AS1Q5SR53 167 aa11.52□□□□□ -0.57
SRPK1-201ENST00000346162 PRRC2AP48634 2157 aaKnown RBP11.52□□□□□ -0.57
SRPK1-201ENST00000346162 TRBV7-7A0A0K0K1E9 115 aa11.52□□□□□ -0.57
SRPK1-201ENST00000346162 A8MZ25 164 aa11.52□□□□□ -0.57
SRPK1-201ENST00000346162 NDUFC1O43677 76 aa11.52□□□□□ -0.57
SRPK1-201ENST00000346162 Q6JHZ5 121 aa11.51□□□□□ -0.57
SRPK1-201ENST00000346162 C4orf26Q17RF5 130 aa11.5□□□□□ -0.57
SRPK1-201ENST00000346162 UBE2DNLQ8IWF7 75 aa11.5□□□□□ -0.57
SRPK1-201ENST00000346162 MAP6D1Q9H9H5 199 aa11.5□□□□□ -0.57
SRPK1-201ENST00000346162 ATP5EP56381 51 aaPredicted RBP11.5□□□□□ -0.57
SRPK1-201ENST00000346162 GYPEP15421 78 aa11.49□□□□□ -0.57
SRPK1-201ENST00000346162 RPS28P62857 69 aaKnown RBP11.49□□□□□ -0.57
SRPK1-201ENST00000346162 Q6YL49 198 aa11.49□□□□□ -0.57
SRPK1-201ENST00000346162 LRRK2Q5S007 2527 aa11.49□□□□□ -0.57
SRPK1-201ENST00000346162 IGHV4-28A0A0C4DH34 117 aa11.48□□□□□ -0.57
SRPK1-201ENST00000346162 C10orf99Q6UWK7 81 aa11.48□□□□□ -0.57
SRPK1-201ENST00000346162 IGHV4-4A0A075B6R2 117 aa11.48□□□□□ -0.57
SRPK1-201ENST00000346162 C11orf21Q9P2W6 132 aa11.48□□□□□ -0.57
SRPK1-201ENST00000346162 IGHV4-31P0DP07 118 aa11.48□□□□□ -0.57
SRPK1-201ENST00000346162 DOPEY1Q5JWR5 2465 aa11.48□□□□□ -0.57
SRPK1-201ENST00000346162 C9orf66Q5T8R8 295 aa11.48□□□□□ -0.57
SRPK1-201ENST00000346162 RETNQ9HD89 108 aa11.48□□□□□ -0.57
SRPK1-201ENST00000346162 TRBV27A0A0K0K1C4 114 aa11.47□□□□□ -0.57
SRPK1-201ENST00000346162 SCXQ7RTU7 201 aa11.47□□□□□ -0.57
SRPK1-201ENST00000346162 DNAJC9-AS1A6NH13 148 aa11.47□□□□□ -0.57
SRPK1-201ENST00000346162 MRPS36P82909 103 aaKnown RBP11.47□□□□□ -0.57
SRPK1-201ENST00000346162 SOSTDC1Q6X4U4 206 aa11.47□□□□□ -0.57
SRPK1-201ENST00000346162 FN1P02751 2386 aaKnown RBP11.47□□□□□ -0.57
SRPK1-201ENST00000346162 Q6ZSV7 163 aa11.47□□□□□ -0.57
SRPK1-201ENST00000346162 NKAPP1Q8N9T2 125 aa11.47□□□□□ -0.57
SRPK1-201ENST00000346162 NDUFA1O15239 70 aa11.46□□□□□ -0.57
SRPK1-201ENST00000346162 TSPEAR-AS2P59090 65 aa11.46□□□□□ -0.57
SRPK1-201ENST00000346162 TRBV6-5A0A0K0K1A5 114 aa11.46□□□□□ -0.58
SRPK1-201ENST00000346162 PSCAO43653 123 aa11.46□□□□□ -0.58
SRPK1-201ENST00000346162 MP68P56378 58 aa11.46□□□□□ -0.58
SRPK1-201ENST00000346162 CRYGAP11844 174 aa11.44□□□□□ -0.58
SRPK1-201ENST00000346162 CDK2AP2O75956 126 aa11.44□□□□□ -0.58
SRPK1-201ENST00000346162 CHD7Q9P2D1 2997 aa11.44□□□□□ -0.58
SRPK1-201ENST00000346162 PYGO1Q9Y3Y4 419 aa11.44□□□□□ -0.58
SRPK1-201ENST00000346162 CLPSL1A2RUU4 121 aa11.44□□□□□ -0.58
SRPK1-201ENST00000346162 IGIPA6NJ69 53 aa11.43□□□□□ -0.58
SRPK1-201ENST00000346162 DEFB105AQ8NG35 78 aa11.43□□□□□ -0.58
SRPK1-201ENST00000346162 ESM1Q9NQ30 184 aa11.43□□□□□ -0.58
SRPK1-201ENST00000346162 TRBV10-1A0A0K0K1A3 114 aa11.43□□□□□ -0.58
SRPK1-201ENST00000346162 KIR2DL5BQ8NHK3 375 aa11.43□□□□□ -0.58
SRPK1-201ENST00000346162 POLR2KP53803 58 aaKnown RBP11.43□□□□□ -0.58
SRPK1-201ENST00000346162 DEFB114Q30KQ6 69 aa11.43□□□□□ -0.58
SRPK1-201ENST00000346162 POM121L12Q8N7R1 296 aa11.42□□□□□ -0.58
SRPK1-201ENST00000346162 IGLV10-54A0A075B6I4 117 aa11.42□□□□□ -0.58
SRPK1-201ENST00000346162 NHLRC4P0CG21 123 aaPredicted RBP11.42□□□□□ -0.58
SRPK1-201ENST00000346162 HIGD2BQ4VC39 106 aa11.42□□□□□ -0.58
SRPK1-201ENST00000346162 M0QY20 66 aa11.42□□□□□ -0.58
SRPK1-201ENST00000346162 SPART-AS1P0CW21 52 aa11.42□□□□□ -0.58
SRPK1-201ENST00000346162 PRR9Q5T870 116 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms