RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 UBE2AP49459 152 aa12.08□□□□□ -0.48
SMARCA4-201ENST00000344626 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.07□□□□□ -0.48
SMARCA4-201ENST00000344626 TRBV6-8A0A0A6YYG3 113 aa12.07□□□□□ -0.48
SMARCA4-201ENST00000344626 PRM2P04554 102 aa12.07□□□□□ -0.48
SMARCA4-201ENST00000344626 DSCR8Q96T75 97 aa12.07□□□□□ -0.48
SMARCA4-201ENST00000344626 GAGE2AQ6NT46 116 aa12.07□□□□□ -0.48
SMARCA4-201ENST00000344626 Q6ZUT4 128 aa12.07□□□□□ -0.48
SMARCA4-201ENST00000344626 IGHV1-58A0A0C4DH39 117 aa12.05□□□□□ -0.48
SMARCA4-201ENST00000344626 TDRG1Q3Y452 100 aa12.05□□□□□ -0.48
SMARCA4-201ENST00000344626 CHCHD10Q8WYQ3 142 aaPredicted RBP12.05□□□□□ -0.48
SMARCA4-201ENST00000344626 NUPR2A6NF83 97 aa12.05□□□□□ -0.48
SMARCA4-201ENST00000344626 CRIP1P50238 77 aa12.05□□□□□ -0.48
SMARCA4-201ENST00000344626 TINCRA0A1B0GVN0 87 aa12.04□□□□□ -0.48
SMARCA4-201ENST00000344626 M0QY20 66 aa12.04□□□□□ -0.48
SMARCA4-201ENST00000344626 PIK3CD-AS1Q5SR53 167 aa12.04□□□□□ -0.48
SMARCA4-201ENST00000344626 Q8N2B8 174 aa12.04□□□□□ -0.48
SMARCA4-201ENST00000344626 IGLV2-11P01706 119 aa12.04□□□□□ -0.48
SMARCA4-201ENST00000344626 CRYBA4P53673 196 aa12.03□□□□□ -0.48
SMARCA4-201ENST00000344626 C9orf118A6NHY6 69 aa12.03□□□□□ -0.48
SMARCA4-201ENST00000344626 CFC1BP0CG36 223 aa12.03□□□□□ -0.48
SMARCA4-201ENST00000344626 CFC1P0CG37 223 aa12.03□□□□□ -0.48
SMARCA4-201ENST00000344626 HIST1H4AP62805 103 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-201ENST00000344626 HIGD2BQ4VC39 106 aa12.03□□□□□ -0.48
SMARCA4-201ENST00000344626 E9PLD3 99 aa12.02□□□□□ -0.48
SMARCA4-201ENST00000344626 H0YGX0 51 aa12.02□□□□□ -0.48
SMARCA4-201ENST00000344626 LINC00467Q9BRT7 94 aa12.02□□□□□ -0.48
SMARCA4-201ENST00000344626 C21orf62-AS1Q17RA5 79 aa12.02□□□□□ -0.48
SMARCA4-201ENST00000344626 UFSP1Q6NVU6 142 aa12.02□□□□□ -0.48
SMARCA4-201ENST00000344626 CEMP1Q6PRD7 247 aaPredicted RBP12.02□□□□□ -0.48
SMARCA4-201ENST00000344626 RBMY1FQ15415 496 aaKnown RBP12.02□□□□□ -0.49
SMARCA4-201ENST00000344626 LELP1Q5T871 98 aa12.02□□□□□ -0.49
SMARCA4-201ENST00000344626 COL6A5A8TX70 2615 aa12.02□□□□□ -0.49
SMARCA4-201ENST00000344626 LINC00173Q6ZV60 143 aa12.02□□□□□ -0.49
SMARCA4-201ENST00000344626 PCP2Q8IVA1 136 aa12.02□□□□□ -0.49
SMARCA4-201ENST00000344626 DEFB105AQ8NG35 78 aa12.01□□□□□ -0.49
SMARCA4-201ENST00000344626 H3BQ85 93 aa12.01□□□□□ -0.49
SMARCA4-201ENST00000344626 MIAQ16674 131 aa12.01□□□□□ -0.49
SMARCA4-201ENST00000344626 C9orf85Q96MD7 179 aa12.01□□□□□ -0.49
SMARCA4-201ENST00000344626 LECT2O14960 151 aa12.01□□□□□ -0.49
SMARCA4-201ENST00000344626 MRGPRG-AS1Q2M3A8 158 aa12.01□□□□□ -0.49
SMARCA4-201ENST00000344626 OPRPNQ99935 248 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-201ENST00000344626 RNASE3P12724 160 aaKnown RBP12□□□□□ -0.49
SMARCA4-201ENST00000344626 ORMDL1Q9P0S3 153 aa12□□□□□ -0.49
SMARCA4-201ENST00000344626 UNC80Q8N2C7 3258 aa12□□□□□ -0.49
SMARCA4-201ENST00000344626 C12orf74Q32Q52 190 aa12□□□□□ -0.49
SMARCA4-201ENST00000344626 MUSTN1Q8IVN3 82 aa11.99□□□□□ -0.49
SMARCA4-201ENST00000344626 TRBV6-5A0A0K0K1A5 114 aa11.99□□□□□ -0.49
SMARCA4-201ENST00000344626 NHLRC4P0CG21 123 aaPredicted RBP11.99□□□□□ -0.49
SMARCA4-201ENST00000344626 PRR9Q5T870 116 aa11.99□□□□□ -0.49
SMARCA4-201ENST00000344626 UBL5Q9BZL1 73 aa11.99□□□□□ -0.49
SMARCA4-201ENST00000344626 XIRP2A4UGR9 3374 aa11.98□□□□□ -0.49
SMARCA4-201ENST00000344626 LRCOL1A6NCL2 159 aa11.98□□□□□ -0.49
SMARCA4-201ENST00000344626 ODF1Q14990 250 aa11.98□□□□□ -0.49
SMARCA4-201ENST00000344626 MAJINQ3KP22 176 aa11.98□□□□□ -0.49
SMARCA4-201ENST00000344626 C4orf48Q5BLP8 95 aa11.98□□□□□ -0.49
SMARCA4-201ENST00000344626 NCR3O14931 201 aa11.98□□□□□ -0.49
SMARCA4-201ENST00000344626 IGHV4-4A0A075B6R2 117 aa11.97□□□□□ -0.49
SMARCA4-201ENST00000344626 NUPR1O60356 82 aa11.97□□□□□ -0.49
SMARCA4-201ENST00000344626 UBE2V1Q13404 147 aa11.97□□□□□ -0.49
SMARCA4-201ENST00000344626 CARD19Q96LW7 228 aa11.97□□□□□ -0.49
SMARCA4-201ENST00000344626 Q6ZTC4 211 aa11.97□□□□□ -0.49
SMARCA4-201ENST00000344626 MIR7-3HGQ8N6C7 128 aa11.97□□□□□ -0.49
SMARCA4-201ENST00000344626 Q8N976 141 aa11.96□□□□□ -0.49
SMARCA4-201ENST00000344626 IGSF10Q6WRI0 2623 aa11.96□□□□□ -0.49
SMARCA4-201ENST00000344626 MRPS12O15235 138 aaKnown RBP11.96□□□□□ -0.49
SMARCA4-201ENST00000344626 ANKRD39Q53RE8 183 aa11.96□□□□□ -0.5
SMARCA4-201ENST00000344626 DIRC1Q969H9 104 aa11.96□□□□□ -0.5
SMARCA4-201ENST00000344626 CLUHP3Q96NS8 147 aa11.96□□□□□ -0.5
SMARCA4-201ENST00000344626 B9D2Q9BPU9 175 aa11.96□□□□□ -0.5
SMARCA4-201ENST00000344626 TRBV27A0A0K0K1C4 114 aa11.95□□□□□ -0.5
SMARCA4-201ENST00000344626 UNC79Q9P2D8 2635 aa11.95□□□□□ -0.5
SMARCA4-201ENST00000344626 RBX1P62877 108 aa11.95□□□□□ -0.5
SMARCA4-201ENST00000344626 TEX15Q9BXT5 2789 aa11.94□□□□□ -0.5
SMARCA4-201ENST00000344626 A4D1N5 150 aa11.94□□□□□ -0.5
SMARCA4-201ENST00000344626 C11orf21Q9P2W6 132 aa11.94□□□□□ -0.5
SMARCA4-201ENST00000344626 IGLV4-3A0A075B6K6 122 aa11.93□□□□□ -0.5
SMARCA4-201ENST00000344626 FUSP35637 526 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMARCA4-201ENST00000344626 PYGO1Q9Y3Y4 419 aa11.93□□□□□ -0.5
SMARCA4-201ENST00000344626 GCN1Q92616 2671 aaKnown RBP11.93□□□□□ -0.5
SMARCA4-201ENST00000344626 OCIAD2Q56VL3 154 aa11.93□□□□□ -0.5
SMARCA4-201ENST00000344626 RNF185Q96GF1 192 aa11.93□□□□□ -0.5
SMARCA4-201ENST00000344626 SIGMAR1Q99720 223 aa11.93□□□□□ -0.5
SMARCA4-201ENST00000344626 HIGD1BQ9P298 99 aa11.93□□□□□ -0.5
SMARCA4-201ENST00000344626 MAP1AP78559 2803 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-201ENST00000344626 K7ERJ3 54 aa11.93□□□□□ -0.5
SMARCA4-201ENST00000344626 PCSK5Q92824 1860 aa11.93□□□□□ -0.5
SMARCA4-201ENST00000344626 DAND5Q8N907 189 aa11.92□□□□□ -0.5
SMARCA4-201ENST00000344626 F8W1H4 67 aa11.92□□□□□ -0.5
SMARCA4-201ENST00000344626 DLEU1O43261 78 aa11.92□□□□□ -0.5
SMARCA4-201ENST00000344626 A0A1W2PPM0 123 aa11.92□□□□□ -0.5
SMARCA4-201ENST00000344626 NPSP0C0P6 89 aa11.92□□□□□ -0.5
SMARCA4-201ENST00000344626 SYCNQ0VAF6 134 aa11.92□□□□□ -0.5
SMARCA4-201ENST00000344626 SPATA12Q7Z6I5 190 aa11.92□□□□□ -0.5
SMARCA4-201ENST00000344626 BAALC-AS2P0C853 105 aa11.91□□□□□ -0.5
SMARCA4-201ENST00000344626 LOC100131303A0A0U1RQF7 123 aa11.91□□□□□ -0.5
SMARCA4-201ENST00000344626 CD164L2Q6UWJ8 174 aa11.9□□□□□ -0.5
SMARCA4-201ENST00000344626 C7orf33Q8WU49 177 aa11.9□□□□□ -0.5
SMARCA4-201ENST00000344626 PPDPFLQ8WWR9 84 aa11.9□□□□□ -0.5
SMARCA4-201ENST00000344626 HAMPP81172 84 aa11.9□□□□□ -0.51
SMARCA4-201ENST00000344626 K7EP34 96 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms