RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 ORMDL3Q8N138 153 aa11.84□□□□□ -0.51
USF2-202ENST00000343550 HERC1Q15751 4861 aa11.84□□□□□ -0.51
USF2-202ENST00000343550 TRAV8-4A0A0B4J246 113 aa11.83□□□□□ -0.52
USF2-202ENST00000343550 FAM229AH3BQW9 127 aa11.83□□□□□ -0.52
USF2-202ENST00000343550 FCER1GP30273 86 aa11.83□□□□□ -0.52
USF2-202ENST00000343550 IGLV10-54A0A075B6I4 117 aa11.82□□□□□ -0.52
USF2-202ENST00000343550 ZNF25P17030 456 aaPredicted RBP11.82□□□□□ -0.52
USF2-202ENST00000343550 CLRN3Q8NCR9 226 aa11.82□□□□□ -0.52
USF2-202ENST00000343550 PRELID3AQ96N28 172 aa11.81□□□□□ -0.52
USF2-202ENST00000343550 TRAV9-1A0A075B6T8 112 aa11.81□□□□□ -0.52
USF2-202ENST00000343550 MRPL52Q86TS9 123 aaKnown RBP11.81□□□□□ -0.52
USF2-202ENST00000343550 SMIM2Q9BVW6 85 aa11.81□□□□□ -0.52
USF2-202ENST00000343550 HLA-DQA1P01909 254 aa11.8□□□□□ -0.52
USF2-202ENST00000343550 RHEBQ15382 184 aa11.8□□□□□ -0.52
USF2-202ENST00000343550 TMEM101Q96IK0 257 aa11.8□□□□□ -0.52
USF2-202ENST00000343550 RPS10P5Q9NQ39 176 aa11.8□□□□□ -0.52
USF2-202ENST00000343550 PRSS47A8MTI9 375 aa11.79□□□□□ -0.52
USF2-202ENST00000343550 S100PP25815 95 aa11.79□□□□□ -0.52
USF2-202ENST00000343550 CDC42SE2Q9NRR3 84 aa11.79□□□□□ -0.52
USF2-202ENST00000343550 FAM30AQ9NZY2 134 aa11.79□□□□□ -0.52
USF2-202ENST00000343550 SRRM2Q9UQ35 2752 aaKnown RBP11.78□□□□□ -0.52
USF2-202ENST00000343550 DMBT1Q9UGM3 2413 aaPredicted RBP11.78□□□□□ -0.52
USF2-202ENST00000343550 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.78□□□□□ -0.52
USF2-202ENST00000343550 IGKV3OR2-268A0A0C4DH90 116 aa11.78□□□□□ -0.52
USF2-202ENST00000343550 TCAPO15273 167 aa11.78□□□□□ -0.52
USF2-202ENST00000343550 OR5A1Q8NGJ0 315 aa11.78□□□□□ -0.52
USF2-202ENST00000343550 LAMTOR2Q9Y2Q5 125 aa11.78□□□□□ -0.52
USF2-202ENST00000343550 VPS13BQ7Z7G8 4022 aa11.78□□□□□ -0.52
USF2-202ENST00000343550 USP17L23D6RBM5 183 aa11.77□□□□□ -0.52
USF2-202ENST00000343550 APOC3P02656 99 aa11.77□□□□□ -0.52
USF2-202ENST00000343550 CSDC2Q9Y534 153 aaKnown RBP11.77□□□□□ -0.52
USF2-202ENST00000343550 C14orf177Q52M58 125 aa11.76□□□□□ -0.53
USF2-202ENST00000343550 ZNF664Q8N3J9 261 aa11.76□□□□□ -0.53
USF2-202ENST00000343550 UBE2D4Q9Y2X8 147 aa11.76□□□□□ -0.53
USF2-202ENST00000343550 DGAT2L7PQ6IED9 249 aa11.76□□□□□ -0.53
USF2-202ENST00000343550 TMEM18Q96B42 140 aa11.76□□□□□ -0.53
USF2-202ENST00000343550 LOC389332A0A1B0GUA5 103 aa11.75□□□□□ -0.53
USF2-202ENST00000343550 MYCBP2O75592 4640 aa11.75□□□□□ -0.53
USF2-202ENST00000343550 FLG2Q5D862 2391 aaPredicted RBP11.74□□□□□ -0.53
USF2-202ENST00000343550 LINC00959A0A1B0GUT2 108 aa11.74□□□□□ -0.53
USF2-202ENST00000343550 GAGE12HA6NDE8 117 aa11.74□□□□□ -0.53
USF2-202ENST00000343550 PRSS1P07477 247 aa11.74□□□□□ -0.53
USF2-202ENST00000343550 SMAGPQ0VAQ4 97 aa11.74□□□□□ -0.53
USF2-202ENST00000343550 CHCHD10Q8WYQ3 142 aaPredicted RBP11.74□□□□□ -0.53
USF2-202ENST00000343550 TIMM21Q9BVV7 248 aa11.74□□□□□ -0.53
USF2-202ENST00000343550 GNB1LQ9BYB4 327 aa11.74□□□□□ -0.53
USF2-202ENST00000343550 MAP1LC3AQ9H492 121 aa11.74□□□□□ -0.53
USF2-202ENST00000343550 RAB5AP20339 215 aa11.73□□□□□ -0.53
USF2-202ENST00000343550 RPL39P62891 51 aaKnown RBP11.73□□□□□ -0.53
USF2-202ENST00000343550 KIAA1644Q3SXP7 199 aa11.73□□□□□ -0.53
USF2-202ENST00000343550 SVBPQ8N300 66 aa11.73□□□□□ -0.53
USF2-202ENST00000343550 SNAPINO95295 136 aa11.72□□□□□ -0.53
USF2-202ENST00000343550 Q6ZSA8 131 aa11.71□□□□□ -0.53
USF2-202ENST00000343550 Q8N8P6 123 aa11.71□□□□□ -0.53
USF2-202ENST00000343550 COX19Q49B96 90 aa11.7□□□□□ -0.54
USF2-202ENST00000343550 LINC01620Q4KN68 170 aa11.7□□□□□ -0.54
USF2-202ENST00000343550 FAM104AQ969W3 186 aa11.7□□□□□ -0.54
USF2-202ENST00000343550 FOXI1Q12951 378 aa11.7□□□□□ -0.54
USF2-202ENST00000343550 SS18Q15532 418 aa11.7□□□□□ -0.54
USF2-202ENST00000343550 CCL25O15444 150 aa11.69□□□□□ -0.54
USF2-202ENST00000343550 XCL1P47992 114 aa11.69□□□□□ -0.54
USF2-202ENST00000343550 RNASE13Q5GAN3 156 aaKnown RBP11.69□□□□□ -0.54
USF2-202ENST00000343550 SPANXA1Q9NS26 97 aa11.69□□□□□ -0.54
USF2-202ENST00000343550 Q6ZUT4 128 aa11.68□□□□□ -0.54
USF2-202ENST00000343550 DNAH8Q96JB1 4490 aa11.67□□□□□ -0.54
USF2-202ENST00000343550 TGIF2-C20orf24A0A0A6YYL0 155 aa11.67□□□□□ -0.54
USF2-202ENST00000343550 PLA2G1BP04054 148 aaKnown RBP11.67□□□□□ -0.54
USF2-202ENST00000343550 IFI27P40305 119 aaPredicted RBP11.67□□□□□ -0.54
USF2-202ENST00000343550 CFAP161Q6P656 301 aa11.67□□□□□ -0.54
USF2-202ENST00000343550 OPRPNQ99935 248 aaPredicted RBP11.67□□□□□ -0.54
USF2-202ENST00000343550 NXT2Q9NPJ8 142 aaKnown RBP11.67□□□□□ -0.54
USF2-202ENST00000343550 hDV102S1A0JD36 115 aa11.66□□□□□ -0.54
USF2-202ENST00000343550 C1orf196B1AJZ1 125 aa11.66□□□□□ -0.54
USF2-202ENST00000343550 K7EMI3 77 aa11.66□□□□□ -0.54
USF2-202ENST00000343550 MT-ND6P03923 174 aa11.66□□□□□ -0.54
USF2-202ENST00000343550 MRPS36P82909 103 aaKnown RBP11.66□□□□□ -0.54
USF2-202ENST00000343550 CD164L2Q6UWJ8 174 aa11.66□□□□□ -0.54
USF2-202ENST00000343550 C15orf56Q8N910 161 aa11.66□□□□□ -0.54
USF2-202ENST00000343550 ALKBH7Q9BT30 221 aaPredicted RBP11.66□□□□□ -0.54
USF2-202ENST00000343550 LINC00528Q8N1L1 170 aa11.65□□□□□ -0.54
USF2-202ENST00000343550 MRPL18Q9H0U6 180 aaKnown RBP11.65□□□□□ -0.54
USF2-202ENST00000343550 PYGO1Q9Y3Y4 419 aa11.65□□□□□ -0.54
USF2-202ENST00000343550 TRAV13-1A0A0B4J241 112 aa11.65□□□□□ -0.55
USF2-202ENST00000343550 J3QL48 77 aa11.65□□□□□ -0.55
USF2-202ENST00000343550 SLPIP03973 132 aa11.65□□□□□ -0.55
USF2-202ENST00000343550 FABP9Q0Z7S8 132 aa11.65□□□□□ -0.55
USF2-202ENST00000343550 ORMDL2Q53FV1 153 aa11.65□□□□□ -0.55
USF2-202ENST00000343550 C9orf163Q8N9P6 203 aa11.65□□□□□ -0.55
USF2-202ENST00000343550 CNBPP62633 177 aaKnown RBP11.63□□□□□ -0.55
USF2-202ENST00000343550 C2orf66Q6UXQ4 117 aa11.63□□□□□ -0.55
USF2-202ENST00000343550 LCE2DQ5TA82 110 aaPredicted RBP11.62□□□□□ -0.55
USF2-202ENST00000343550 SCXQ7RTU7 201 aa11.62□□□□□ -0.55
USF2-202ENST00000343550 PRSS3P2Q8NHM4 247 aa11.62□□□□□ -0.55
USF2-202ENST00000343550 AP5S1Q9NUS5 200 aa11.62□□□□□ -0.55
USF2-202ENST00000343550 CYSLTR1Q9Y271 337 aa11.62□□□□□ -0.55
USF2-202ENST00000343550 YPEL4Q96NS1 127 aa11.61□□□□□ -0.55
USF2-202ENST00000343550 TRAPPC1Q9Y5R8 145 aa11.61□□□□□ -0.55
USF2-202ENST00000343550 IGLV4-3A0A075B6K6 122 aa11.6□□□□□ -0.55
USF2-202ENST00000343550 HIGD2BQ4VC39 106 aa11.6□□□□□ -0.55
USF2-202ENST00000343550 CHAC1Q9BUX1 264 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms