RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 C2orf48Q96LS8 159 aa10.07□□□□□ -0.8
TRA2B-202ENST00000342294 UBE2D1P51668 147 aa10.06□□□□□ -0.8
TRA2B-202ENST00000342294 EIF5AL1Q6IS14 154 aaKnown RBP10.06□□□□□ -0.8
TRA2B-202ENST00000342294 MRPL52Q86TS9 123 aaKnown RBP10.06□□□□□ -0.8
TRA2B-202ENST00000342294 KCNRGQ8N5I3 272 aa10.06□□□□□ -0.8
TRA2B-202ENST00000342294 BCL2L11O43521 198 aa10.05□□□□□ -0.8
TRA2B-202ENST00000342294 TWIST1Q15672 202 aa10.05□□□□□ -0.8
TRA2B-202ENST00000342294 RNF151Q2KHN1 245 aa10.05□□□□□ -0.8
TRA2B-202ENST00000342294 FAM213BQ8TBF2 198 aa10.05□□□□□ -0.8
TRA2B-202ENST00000342294 OPRPNQ99935 248 aaPredicted RBP10.05□□□□□ -0.8
TRA2B-202ENST00000342294 G3V3Q6 166 aa10.04□□□□□ -0.8
TRA2B-202ENST00000342294 I3L3M4 83 aa10.04□□□□□ -0.8
TRA2B-202ENST00000342294 COX7A2LO14548 114 aa10.04□□□□□ -0.8
TRA2B-202ENST00000342294 TSKUQ8WUA8 353 aa10.04□□□□□ -0.8
TRA2B-202ENST00000342294 SMIM12Q96EX1 92 aa10.04□□□□□ -0.8
TRA2B-202ENST00000342294 TRBV6-5A0A0K0K1A5 114 aa10.03□□□□□ -0.8
TRA2B-202ENST00000342294 TSHBP01222 138 aa10.03□□□□□ -0.8
TRA2B-202ENST00000342294 PMCHP20382 165 aa10.03□□□□□ -0.8
TRA2B-202ENST00000342294 MALP21145 153 aa10.03□□□□□ -0.8
TRA2B-202ENST00000342294 CARHSP1Q9Y2V2 147 aaKnown RBP10.03□□□□□ -0.8
TRA2B-202ENST00000342294 FAM168BA1KXE4 195 aa10.02□□□□□ -0.81
TRA2B-202ENST00000342294 RAB19A4D1S5 217 aa10.02□□□□□ -0.81
TRA2B-202ENST00000342294 UMAD1C9J7I0 102 aa10.02□□□□□ -0.81
TRA2B-202ENST00000342294 FOXA3P55318 350 aaPredicted RBP10.02□□□□□ -0.81
TRA2B-202ENST00000342294 TEX261Q6UWH6 196 aa10.02□□□□□ -0.81
TRA2B-202ENST00000342294 C1orf196B1AJZ1 125 aa10.01□□□□□ -0.81
TRA2B-202ENST00000342294 CCL20P78556 96 aa10.01□□□□□ -0.81
TRA2B-202ENST00000342294 MRAP2Q96G30 205 aa10.01□□□□□ -0.81
TRA2B-202ENST00000342294 TRBV20OR9-2A0A075B6H5 130 aa10□□□□□ -0.81
TRA2B-202ENST00000342294 TSPAN13O95857 204 aa10□□□□□ -0.81
TRA2B-202ENST00000342294 H2AFB1P0C5Y9 115 aa10□□□□□ -0.81
TRA2B-202ENST00000342294 GNG4P50150 75 aa10□□□□□ -0.81
TRA2B-202ENST00000342294 KRTAP7-1Q8IUC3 87 aa10□□□□□ -0.81
TRA2B-202ENST00000342294 NUDT10Q8NFP7 164 aa10□□□□□ -0.81
TRA2B-202ENST00000342294 NUDT11Q96G61 164 aa10□□□□□ -0.81
TRA2B-202ENST00000342294 FAM210AQ96ND0 272 aa10□□□□□ -0.81
TRA2B-202ENST00000342294 TMEM242Q9NWH2 141 aa10□□□□□ -0.81
TRA2B-202ENST00000342294 ARPC5O15511 151 aa9.99□□□□□ -0.81
TRA2B-202ENST00000342294 MRPL35Q9NZE8 188 aaKnown RBP9.98□□□□□ -0.81
TRA2B-202ENST00000342294 SPAG11BQ08648 103 aa9.97□□□□□ -0.81
TRA2B-202ENST00000342294 C5orf38Q86SI9 138 aa9.97□□□□□ -0.81
TRA2B-202ENST00000342294 RNASE7Q9H1E1 156 aaKnown RBP9.97□□□□□ -0.81
TRA2B-202ENST00000342294 RPP21Q9H633 154 aaKnown RBP9.97□□□□□ -0.81
TRA2B-202ENST00000342294 MANBALQ9NQG1 85 aa9.97□□□□□ -0.81
TRA2B-202ENST00000342294 BIN3Q9NQY0 253 aa9.97□□□□□ -0.81
TRA2B-202ENST00000342294 GNG13Q9P2W3 67 aa9.97□□□□□ -0.81
TRA2B-202ENST00000342294 TLX1NBP0CAT3 122 aa9.96□□□□□ -0.82
TRA2B-202ENST00000342294 POLR2KP53803 58 aaKnown RBP9.96□□□□□ -0.82
TRA2B-202ENST00000342294 FAM19A5Q7Z5A7 132 aaPredicted RBP9.96□□□□□ -0.82
TRA2B-202ENST00000342294 IMMP2LQ96T52 175 aa9.96□□□□□ -0.82
TRA2B-202ENST00000342294 CSDC2Q9Y534 153 aaKnown RBP9.96□□□□□ -0.82
TRA2B-202ENST00000342294 C7orf77A4D0Y5 90 aa9.95□□□□□ -0.82
TRA2B-202ENST00000342294 LCE2DQ5TA82 110 aaPredicted RBP9.95□□□□□ -0.82
TRA2B-202ENST00000342294 SMIM15Q7Z3B0 74 aa9.95□□□□□ -0.82
TRA2B-202ENST00000342294 OR10D4PQ8NGN7 298 aa9.95□□□□□ -0.82
TRA2B-202ENST00000342294 ST20Q9HBF5 79 aa9.95□□□□□ -0.82
TRA2B-202ENST00000342294 TRBV27A0A0K0K1C4 114 aa9.94□□□□□ -0.82
TRA2B-202ENST00000342294 F8WDY8 70 aa9.94□□□□□ -0.82
TRA2B-202ENST00000342294 TRAV13-1A0A0B4J241 112 aa9.93□□□□□ -0.82
TRA2B-202ENST00000342294 RNASE13Q5GAN3 156 aaKnown RBP9.93□□□□□ -0.82
TRA2B-202ENST00000342294 C10orf25Q5T742 122 aa9.93□□□□□ -0.82
TRA2B-202ENST00000342294 M0QXV9 152 aa9.92□□□□□ -0.82
TRA2B-202ENST00000342294 CRCT1Q9UGL9 99 aa9.92□□□□□ -0.82
TRA2B-202ENST00000342294 UBE2D4Q9Y2X8 147 aa9.92□□□□□ -0.82
TRA2B-202ENST00000342294 ZNF861PO60384 105 aa9.91□□□□□ -0.82
TRA2B-202ENST00000342294 UBE2BP63146 152 aa9.91□□□□□ -0.82
TRA2B-202ENST00000342294 SMDT1Q9H4I9 107 aa9.91□□□□□ -0.82
TRA2B-202ENST00000342294 MED9Q9NWA0 146 aa9.91□□□□□ -0.82
TRA2B-202ENST00000342294 A0A087X002 238 aa9.9□□□□□ -0.82
TRA2B-202ENST00000342294 NDUFA1O15239 70 aa9.9□□□□□ -0.82
TRA2B-202ENST00000342294 PDE6DO43924 150 aa9.9□□□□□ -0.82
TRA2B-202ENST00000342294 ZNF345Q14585 488 aa9.9□□□□□ -0.82
TRA2B-202ENST00000342294 TMEM241Q24JQ0 296 aa9.9□□□□□ -0.82
TRA2B-202ENST00000342294 GAGE2EQ4V326 116 aa9.9□□□□□ -0.82
TRA2B-202ENST00000342294 UNQ6190/PRO20217Q6UXQ8 127 aa9.9□□□□□ -0.82
TRA2B-202ENST00000342294 ORAOV1Q8WV07 137 aa9.9□□□□□ -0.82
TRA2B-202ENST00000342294 C6orf48Q9UBA6 75 aa9.9□□□□□ -0.82
TRA2B-202ENST00000342294 GAGE2DQ9UEU5 116 aa9.9□□□□□ -0.82
TRA2B-202ENST00000342294 K7EN84 100 aa9.89□□□□□ -0.83
TRA2B-202ENST00000342294 Q6ZUT4 128 aa9.88□□□□□ -0.83
TRA2B-202ENST00000342294 MUC17Q685J3 4493 aa9.88□□□□□ -0.83
TRA2B-202ENST00000342294 IGHV3OR16-9A0A0B4J2B5 98 aa9.87□□□□□ -0.83
TRA2B-202ENST00000342294 SMLR1H3BR10 107 aa9.87□□□□□ -0.83
TRA2B-202ENST00000342294 OCC1Q8TAD7 63 aa9.87□□□□□ -0.83
TRA2B-202ENST00000342294 SMAGPQ0VAQ4 97 aa9.86□□□□□ -0.83
TRA2B-202ENST00000342294 TPRXLQ17RH7 258 aa9.86□□□□□ -0.83
TRA2B-202ENST00000342294 TIMM21Q9BVV7 248 aa9.86□□□□□ -0.83
TRA2B-202ENST00000342294 VCYO14598 125 aa9.85□□□□□ -0.83
TRA2B-202ENST00000342294 RAB4AP20338 218 aa9.85□□□□□ -0.83
TRA2B-202ENST00000342294 FCER1GP30273 86 aa9.85□□□□□ -0.83
TRA2B-202ENST00000342294 C9orf129Q5T035 196 aaKnown RBP9.85□□□□□ -0.83
TRA2B-202ENST00000342294 TYMSOSQ8TAI1 123 aa9.85□□□□□ -0.83
TRA2B-202ENST00000342294 FAM104AQ969W3 186 aa9.85□□□□□ -0.83
TRA2B-202ENST00000342294 RETNLBQ9BQ08 111 aa9.85□□□□□ -0.83
TRA2B-202ENST00000342294 CDIP1Q9H305 208 aa9.85□□□□□ -0.83
TRA2B-202ENST00000342294 TMEM191AQ9H0A3 160 aa9.84□□□□□ -0.83
TRA2B-202ENST00000342294 CRYGAP11844 174 aa9.83□□□□□ -0.84
TRA2B-202ENST00000342294 KIAA0087Q14695 138 aa9.83□□□□□ -0.84
TRA2B-202ENST00000342294 A8MWL6 223 aa9.82□□□□□ -0.84
TRA2B-202ENST00000342294 NUPR1O60356 82 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms