RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 TRAV23DV6A0A075B6W5 121 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 TRBV6-5A0A0K0K1A5 114 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 LRBAP50851 2863 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 Q0VFX4 171 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 LINC01561Q8N1V8 128 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 BEAN1Q3B7T3 259 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 BPESC1Q9GZL8 116 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 FAM30AQ9NZY2 134 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 LINC00336Q6ZUF6 198 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 NFE4Q86UQ8 179 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 FXYD5Q96DB9 178 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 RPL36AP83881 106 aaKnown RBP2.71□□□□□ -1.98
SYNE1-201ENST00000341594 RPL36ALQ969Q0 106 aaKnown RBP2.71□□□□□ -1.98
SYNE1-201ENST00000341594 GAFA1Q96PS6 74 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 CDIP1Q9H305 208 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 MGAM2Q2M2H8 2515 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 PIP4P2Q8N4L2 257 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 XCL2Q9UBD3 114 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 TEX49A0A1B0GTD5 131 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 A8MTW9 85 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 APOC4P55056 127 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 RNF7Q9UBF6 113 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 ICOSQ9Y6W8 199 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 NHLRC4P0CG21 123 aaPredicted RBP2.71□□□□□ -1.98
SYNE1-201ENST00000341594 ZNF706Q9Y5V0 76 aaPredicted RBP2.71□□□□□ -1.98
SYNE1-201ENST00000341594 C9orf47Q6ZRZ4 202 aa2.71□□□□□ -1.98
SYNE1-201ENST00000341594 TNFRSF13BO14836 293 aaPredicted RBP2.7□□□□□ -1.98
SYNE1-201ENST00000341594 MDFIQ99750 246 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 PRR25Q96S07 402 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 KLF14Q8TD94 323 aaPredicted RBP2.7□□□□□ -1.98
SYNE1-201ENST00000341594 NBEAL2Q6ZNJ1 2754 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 IGHV1OR15-1A0A075B7D0 117 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 IGLV2-14P01704 120 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 Q8N7P7 452 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 NSD1Q96L73 2696 aaPredicted RBP2.7□□□□□ -1.98
SYNE1-201ENST00000341594 BUB1B-PAK6H3BSN5 160 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 ZNF833PQ6ZTB9 187 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 DNAJC9-AS1A6NH13 148 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 DCANP1Q8TF63 244 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 XGP55808 180 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 ZNF503-AS2A6NEH8 195 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 K7EIM0 57 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 LINC00310P59036 64 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 DAZ2Q13117 558 aaKnown RBP2.7□□□□□ -1.98
SYNE1-201ENST00000341594 DAZ4Q86SG3 579 aaKnown RBP2.7□□□□□ -1.98
SYNE1-201ENST00000341594 DAZ1Q9NQZ3 744 aaKnown RBP2.7□□□□□ -1.98
SYNE1-201ENST00000341594 DAZ3Q9NR90 486 aaKnown RBP2.7□□□□□ -1.98
SYNE1-201ENST00000341594 M0R1W7 72 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 PSPNO60542 156 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 COX17Q14061 63 aa2.7□□□□□ -1.98
SYNE1-201ENST00000341594 NREPQ16612 68 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 IGHV1-18A0A0C4DH31 117 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 ZNF22P17026 224 aaPredicted RBP2.69□□□□□ -1.98
SYNE1-201ENST00000341594 MRPL35Q9NZE8 188 aaKnown RBP2.69□□□□□ -1.98
SYNE1-201ENST00000341594 DEFB114Q30KQ6 69 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 PSPHP1O15172 72 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 MIFP14174 115 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 HILS1P60008 231 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 RPL39P62891 51 aaKnown RBP2.69□□□□□ -1.98
SYNE1-201ENST00000341594 NCR3O14931 201 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 Q9H8V8 135 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 IGLV2-8P01709 118 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 CRIP3Q6Q6R5 217 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 TMEM254Q8TBM7 123 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 C8orf87E5RJ46 101 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 SAA4P35542 130 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 SLC22A18ASQ8N1D0 253 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 J3QQQ9 107 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 K7ENP7 123 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 GGNQ86UU5 652 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 FAM19A3Q7Z5A8 133 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 TNP2Q05952 138 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 SPRY4Q9C004 299 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 C7orf69Q9H7B7 122 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 TRBV7-3A0A075B6L6 115 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 TRBV27A0A0K0K1C4 114 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 CLPSP04118 112 aa2.69□□□□□ -1.98
SYNE1-201ENST00000341594 NRACQ8N912 160 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 K7EMT4 169 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 C1orf158Q8N1D5 194 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 PRO0461Q9UI25 63 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 TRGV3P03979 118 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 C18orf65Q6ZTR6 163 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 ASB16-AS1Q495Z4 193 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 CELA1Q9UNI1 258 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 MDS2Q8NDY4 140 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 IGLV3-9A0A075B6K5 115 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 TRBV7-6A0A0J9YX20 115 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 IGLV1-44P01699 117 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 IGLV2-11P01706 119 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 NEXN-AS1Q8NBZ9 246 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 COX7B2Q8TF08 81 aa2.68□□□□□ -1.98
SYNE1-201ENST00000341594 LINC00474Q9P2X8 69 aa2.67□□□□□ -1.98
SYNE1-201ENST00000341594 PATE2Q6UY27 113 aa2.67□□□□□ -1.98
SYNE1-201ENST00000341594 IGHV1-3A0A0C4DH29 117 aa2.67□□□□□ -1.98
SYNE1-201ENST00000341594 IGKV2D-26A0A0A0MRZ7 120 aa2.67□□□□□ -1.98
SYNE1-201ENST00000341594 Q6ZS46 218 aa2.67□□□□□ -1.98
SYNE1-201ENST00000341594 DPM3Q9P2X0 92 aa2.67□□□□□ -1.98
SYNE1-201ENST00000341594 TRAV7A0A075B6U4 112 aa2.67□□□□□ -1.98
SYNE1-201ENST00000341594 C9orf106Q8NAJ2 232 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms