RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 CBY1Q9Y3M2 126 aa12.12□□□□□ -0.47
CLDN4-201ENST00000340958 ICOSQ9Y6W8 199 aa12.12□□□□□ -0.47
CLDN4-201ENST00000340958 NHLRC4P0CG21 123 aaPredicted RBP12.11□□□□□ -0.47
CLDN4-201ENST00000340958 SMAGPQ0VAQ4 97 aa12.11□□□□□ -0.47
CLDN4-201ENST00000340958 MRPL23Q16540 153 aaKnown RBP12.11□□□□□ -0.47
CLDN4-201ENST00000340958 PAPPA-AS1Q5QFB9 102 aa12.11□□□□□ -0.47
CLDN4-201ENST00000340958 ORAOV1Q8WV07 137 aa12.11□□□□□ -0.47
CLDN4-201ENST00000340958 STAB2Q8WWQ8 2551 aa12.11□□□□□ -0.47
CLDN4-201ENST00000340958 HSBP1L1C9JCN9 74 aa12.11□□□□□ -0.47
CLDN4-201ENST00000340958 HINT1P49773 126 aaPredicted RBP12.11□□□□□ -0.47
CLDN4-201ENST00000340958 AMMECR1LQ6DCA0 310 aa12.11□□□□□ -0.47
CLDN4-201ENST00000340958 VCX2Q9H322 139 aa12.11□□□□□ -0.47
CLDN4-201ENST00000340958 SPANXA1Q9NS26 97 aa12.11□□□□□ -0.47
CLDN4-201ENST00000340958 A0A087WX48 190 aa12.1□□□□□ -0.47
CLDN4-201ENST00000340958 DEFB131BA0A096LNP1 70 aa12.1□□□□□ -0.47
CLDN4-201ENST00000340958 TRBV6-8A0A0A6YYG3 113 aa12.1□□□□□ -0.47
CLDN4-201ENST00000340958 TRAV12-1A0A0B4J245 112 aa12.1□□□□□ -0.47
CLDN4-201ENST00000340958 CEMP1Q6PRD7 247 aaPredicted RBP12.1□□□□□ -0.47
CLDN4-201ENST00000340958 OPRPNQ99935 248 aaPredicted RBP12.1□□□□□ -0.47
CLDN4-201ENST00000340958 CHCHD5Q9BSY4 110 aa12.1□□□□□ -0.47
CLDN4-201ENST00000340958 UBE2D4Q9Y2X8 147 aa12.1□□□□□ -0.47
CLDN4-201ENST00000340958 CHTOPQ9Y3Y2 248 aaKnown RBP12.1□□□□□ -0.47
CLDN4-201ENST00000340958 PYGO1Q9Y3Y4 419 aa12.1□□□□□ -0.47
CLDN4-201ENST00000340958 ODF1Q14990 250 aa12.09□□□□□ -0.47
CLDN4-201ENST00000340958 PMVKQ15126 192 aa12.09□□□□□ -0.47
CLDN4-201ENST00000340958 SH2D6Q7Z4S9 175 aa12.09□□□□□ -0.47
CLDN4-201ENST00000340958 PRSS29PA6NIE9 313 aa12.09□□□□□ -0.47
CLDN4-201ENST00000340958 MRPL35Q9NZE8 188 aaKnown RBP12.09□□□□□ -0.47
CLDN4-201ENST00000340958 TMEM101Q96IK0 257 aa12.08□□□□□ -0.48
CLDN4-201ENST00000340958 IGLV4-3A0A075B6K6 122 aa12.07□□□□□ -0.48
CLDN4-201ENST00000340958 DPM2O94777 84 aa12.07□□□□□ -0.48
CLDN4-201ENST00000340958 IGKCP01834 107 aa12.07□□□□□ -0.48
CLDN4-201ENST00000340958 FGF6P10767 208 aa12.07□□□□□ -0.48
CLDN4-201ENST00000340958 ZC2HC1BQ5TFG8 222 aa12.07□□□□□ -0.48
CLDN4-201ENST00000340958 CST9LQ9H4G1 147 aa12.07□□□□□ -0.48
CLDN4-201ENST00000340958 hDV102S1A0JD36 115 aa12.07□□□□□ -0.48
CLDN4-201ENST00000340958 F8VRH5 84 aa12.07□□□□□ -0.48
CLDN4-201ENST00000340958 GAGE6Q13070 117 aa12.07□□□□□ -0.48
CLDN4-201ENST00000340958 COX11Q9Y6N1 276 aa12.07□□□□□ -0.48
CLDN4-201ENST00000340958 TMEM262E9PQX1 116 aa12.06□□□□□ -0.48
CLDN4-201ENST00000340958 H7C423 109 aa12.06□□□□□ -0.48
CLDN4-201ENST00000340958 PLNP26678 52 aa12.06□□□□□ -0.48
CLDN4-201ENST00000340958 RNASE13Q5GAN3 156 aaKnown RBP12.06□□□□□ -0.48
CLDN4-201ENST00000340958 OR5A1Q8NGJ0 315 aa12.06□□□□□ -0.48
CLDN4-201ENST00000340958 TRAV10A0A0B4J240 114 aa12.05□□□□□ -0.48
CLDN4-201ENST00000340958 TIMM21Q9BVV7 248 aa12.05□□□□□ -0.48
CLDN4-201ENST00000340958 H3BNG1 76 aa12.04□□□□□ -0.48
CLDN4-201ENST00000340958 SLC25A34Q6PIV7 304 aa12.04□□□□□ -0.48
CLDN4-201ENST00000340958 Q6ZUT4 128 aa12.04□□□□□ -0.48
CLDN4-201ENST00000340958 CCL25O15444 150 aa12.03□□□□□ -0.48
CLDN4-201ENST00000340958 TP73-AS1Q9UF72 201 aa12.03□□□□□ -0.48
CLDN4-201ENST00000340958 TCTAP57738 103 aa12.02□□□□□ -0.49
CLDN4-201ENST00000340958 MRPS36P82909 103 aaKnown RBP12.02□□□□□ -0.49
CLDN4-201ENST00000340958 UBE2V1Q13404 147 aa12.02□□□□□ -0.49
CLDN4-201ENST00000340958 Q6ZVH6 145 aa12.02□□□□□ -0.49
CLDN4-201ENST00000340958 CSDC2Q9Y534 153 aaKnown RBP12.02□□□□□ -0.49
CLDN4-201ENST00000340958 MPV17L2Q567V2 206 aa12.01□□□□□ -0.49
CLDN4-201ENST00000340958 AMELXQ99217 191 aa12.01□□□□□ -0.49
CLDN4-201ENST00000340958 DNAH7Q8WXX0 4024 aa12.01□□□□□ -0.49
CLDN4-201ENST00000340958 PTTG1IPP53801 180 aa12□□□□□ -0.49
CLDN4-201ENST00000340958 BVES-AS1Q5T3Y7 98 aa12□□□□□ -0.49
CLDN4-201ENST00000340958 LELP1Q5T871 98 aa11.99□□□□□ -0.49
CLDN4-201ENST00000340958 LYPD5Q6UWN5 251 aa11.99□□□□□ -0.49
CLDN4-201ENST00000340958 CDC42SE2Q9NRR3 84 aa11.99□□□□□ -0.49
CLDN4-201ENST00000340958 TMEM170BQ5T4T1 132 aa11.98□□□□□ -0.49
CLDN4-201ENST00000340958 FAM104AQ969W3 186 aa11.98□□□□□ -0.49
CLDN4-201ENST00000340958 CHAC1Q9BUX1 264 aa11.98□□□□□ -0.49
CLDN4-201ENST00000340958 IGLV4-69A0A075B6H9 119 aa11.97□□□□□ -0.49
CLDN4-201ENST00000340958 TRAV8-6A0A0B4J262 113 aa11.97□□□□□ -0.49
CLDN4-201ENST00000340958 A0A0J9YXV3 536 aa11.97□□□□□ -0.49
CLDN4-201ENST00000340958 COX8AP10176 69 aa11.97□□□□□ -0.49
CLDN4-201ENST00000340958 WWC2-AS2Q96NR7 200 aa11.97□□□□□ -0.49
CLDN4-201ENST00000340958 TRAV13-1A0A0B4J241 112 aa11.97□□□□□ -0.49
CLDN4-201ENST00000340958 IGKV3OR2-268A0A0C4DH90 116 aa11.97□□□□□ -0.49
CLDN4-201ENST00000340958 C11orf86A6NJI1 115 aa11.97□□□□□ -0.49
CLDN4-201ENST00000340958 TAX1BP3O14907 124 aa11.97□□□□□ -0.49
CLDN4-201ENST00000340958 IGLL5B9A064 214 aa11.96□□□□□ -0.49
CLDN4-201ENST00000340958 NMUP48645 174 aa11.96□□□□□ -0.49
CLDN4-201ENST00000340958 C15orf53Q8NAA6 179 aa11.96□□□□□ -0.49
CLDN4-201ENST00000340958 GEMIN7Q9H840 131 aaKnown RBP11.96□□□□□ -0.49
CLDN4-201ENST00000340958 IGLV4-60A0A075B6I1 120 aa11.95□□□□□ -0.5
CLDN4-201ENST00000340958 RBX1P62877 108 aa11.95□□□□□ -0.5
CLDN4-201ENST00000340958 HERVK_113P61574 105 aa11.95□□□□□ -0.5
CLDN4-201ENST00000340958 ANKRD39Q53RE8 183 aa11.95□□□□□ -0.5
CLDN4-201ENST00000340958 C2orf91Q6ZV80 131 aa11.95□□□□□ -0.5
CLDN4-201ENST00000340958 K7EP13 123 aa11.94□□□□□ -0.5
CLDN4-201ENST00000340958 A0A1B0GUV1 79 aa11.93□□□□□ -0.5
CLDN4-201ENST00000340958 UBE2D1P51668 147 aa11.93□□□□□ -0.5
CLDN4-201ENST00000340958 TIRAPP58753 221 aa11.93□□□□□ -0.5
CLDN4-201ENST00000340958 NFE4Q86UQ8 179 aa11.93□□□□□ -0.5
CLDN4-201ENST00000340958 TINCRA0A1B0GVN0 87 aa11.93□□□□□ -0.5
CLDN4-201ENST00000340958 SEC11AP67812 179 aa11.93□□□□□ -0.5
CLDN4-201ENST00000340958 ANGP03950 147 aaKnown RBP11.92□□□□□ -0.5
CLDN4-201ENST00000340958 CSMD3Q7Z407 3707 aa11.91□□□□□ -0.5
CLDN4-201ENST00000340958 ESRGQ1W209 222 aa11.91□□□□□ -0.5
CLDN4-201ENST00000340958 HERVK_113P63121 156 aa11.9□□□□□ -0.5
CLDN4-201ENST00000340958 ZNF22P17026 224 aaPredicted RBP11.9□□□□□ -0.5
CLDN4-201ENST00000340958 VAMP3Q15836 100 aa11.9□□□□□ -0.5
CLDN4-201ENST00000340958 CLPSL2Q6UWE3 100 aa11.9□□□□□ -0.5
CLDN4-201ENST00000340958 H3BRM9 83 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms