RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 PRM2P04554 102 aa9.32□□□□□ -0.92
BRPF3-201ENST00000339717 LINC00574Q9H8X3 128 aa9.32□□□□□ -0.92
BRPF3-201ENST00000339717 CADP27708 2225 aa9.32□□□□□ -0.92
BRPF3-201ENST00000339717 ETDCA0A1B0GVM5 59 aa9.32□□□□□ -0.92
BRPF3-201ENST00000339717 LINC00208Q96KT6 92 aa9.32□□□□□ -0.92
BRPF3-201ENST00000339717 NUP210LQ5VU65 1888 aa9.32□□□□□ -0.92
BRPF3-201ENST00000339717 ABCA4P78363 2273 aa9.32□□□□□ -0.92
BRPF3-201ENST00000339717 H3BUA1 57 aa9.31□□□□□ -0.92
BRPF3-201ENST00000339717 B9D2Q9BPU9 175 aa9.31□□□□□ -0.92
BRPF3-201ENST00000339717 K7ERS5 55 aa9.31□□□□□ -0.92
BRPF3-201ENST00000339717 CGB3P0DN86 165 aa9.31□□□□□ -0.92
BRPF3-201ENST00000339717 CGB7P0DN87 165 aa9.31□□□□□ -0.92
BRPF3-201ENST00000339717 ZNF407Q9C0G0 2248 aa9.31□□□□□ -0.92
BRPF3-201ENST00000339717 G3V318 75 aa9.3□□□□□ -0.92
BRPF3-201ENST00000339717 LINC00467Q9BRT7 94 aa9.3□□□□□ -0.92
BRPF3-201ENST00000339717 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.3□□□□□ -0.92
BRPF3-201ENST00000339717 VWA8A3KMH1 1905 aa9.3□□□□□ -0.92
BRPF3-201ENST00000339717 LYNX1G3V0Z9 82 aa9.3□□□□□ -0.92
BRPF3-201ENST00000339717 LYNX1P0DP58 116 aa9.3□□□□□ -0.92
BRPF3-201ENST00000339717 Q6ZQY7 126 aa9.3□□□□□ -0.92
BRPF3-201ENST00000339717 ZNF672Q499Z4 452 aaPredicted RBP9.3□□□□□ -0.92
BRPF3-201ENST00000339717 THADAQ6YHU6 1953 aa9.3□□□□□ -0.92
BRPF3-201ENST00000339717 MDFIQ99750 246 aa9.29□□□□□ -0.92
BRPF3-201ENST00000339717 C1orf158Q8N1D5 194 aa9.29□□□□□ -0.92
BRPF3-201ENST00000339717 LINC00482Q8N8I6 264 aa9.29□□□□□ -0.92
BRPF3-201ENST00000339717 TMEM131Q92545 1883 aa9.29□□□□□ -0.92
BRPF3-201ENST00000339717 KIAA1671Q9BY89 1806 aa9.29□□□□□ -0.92
BRPF3-201ENST00000339717 NOTCH3Q9UM47 2321 aa9.29□□□□□ -0.92
BRPF3-201ENST00000339717 C8orf87E5RJ46 101 aa9.29□□□□□ -0.92
BRPF3-201ENST00000339717 FER1L5A0AVI2 2057 aa9.28□□□□□ -0.92
BRPF3-201ENST00000339717 Q8N9L7 120 aa9.28□□□□□ -0.92
BRPF3-201ENST00000339717 MDS2Q8NDY4 140 aa9.28□□□□□ -0.92
BRPF3-201ENST00000339717 LINC01600Q96MT4 127 aa9.28□□□□□ -0.92
BRPF3-201ENST00000339717 FREM1Q5H8C1 2179 aa9.28□□□□□ -0.92
BRPF3-201ENST00000339717 C11orf21Q9P2W6 132 aa9.28□□□□□ -0.92
BRPF3-201ENST00000339717 RBM12B-AS1Q9P1G2 102 aa9.27□□□□□ -0.93
BRPF3-201ENST00000339717 TRBV6-8A0A0A6YYG3 113 aa9.27□□□□□ -0.93
BRPF3-201ENST00000339717 Q9UF83 564 aa9.27□□□□□ -0.93
BRPF3-201ENST00000339717 TRBV6-4A0A1B0GX49 114 aa9.27□□□□□ -0.93
BRPF3-201ENST00000339717 DSCR9P59020 149 aa9.27□□□□□ -0.93
BRPF3-201ENST00000339717 ZFAND2AQ8N6M9 145 aa9.27□□□□□ -0.93
BRPF3-201ENST00000339717 CCL18P55774 89 aa9.26□□□□□ -0.93
BRPF3-201ENST00000339717 CDSNQ15517 529 aa9.26□□□□□ -0.93
BRPF3-201ENST00000339717 ADAMTS9Q9P2N4 1935 aa9.26□□□□□ -0.93
BRPF3-201ENST00000339717 DOCK10Q96BY6 2186 aa9.26□□□□□ -0.93
BRPF3-201ENST00000339717 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.25□□□□□ -0.939e-7■■■■■ 30.8
BRPF3-201ENST00000339717 HIGD2AQ9BW72 106 aa9.25□□□□□ -0.93
BRPF3-201ENST00000339717 ANGP03950 147 aaKnown RBP9.25□□□□□ -0.93
BRPF3-201ENST00000339717 GPHB5Q86YW7 130 aa9.25□□□□□ -0.93
BRPF3-201ENST00000339717 PCNX1Q96RV3 2341 aa9.25□□□□□ -0.93
BRPF3-201ENST00000339717 DAZAP2Q15038 168 aaPredicted RBP9.25□□□□□ -0.93
BRPF3-201ENST00000339717 AMELXQ99217 191 aa9.25□□□□□ -0.93
BRPF3-201ENST00000339717 C3orf84H3BNL1 204 aa9.24□□□□□ -0.93
BRPF3-201ENST00000339717 CTSZQ9UBR2 303 aa9.24□□□□□ -0.93
BRPF3-201ENST00000339717 ARHGAP32A7KAX9 2087 aa9.24□□□□□ -0.93
BRPF3-201ENST00000339717 TCF20Q9UGU0 1960 aaKnown RBP9.24□□□□□ -0.93
BRPF3-201ENST00000339717 RUSC1-AS1Q66K80 236 aa9.24□□□□□ -0.93
BRPF3-201ENST00000339717 RNASE3P12724 160 aaKnown RBP9.23□□□□□ -0.93
BRPF3-201ENST00000339717 C1orf229Q6ZS94 237 aaPredicted RBP9.23□□□□□ -0.93
BRPF3-201ENST00000339717 SMAD5-AS1Q9Y6J3 95 aa9.23□□□□□ -0.93
BRPF3-201ENST00000339717 KIF26AQ9ULI4 1882 aaPredicted RBP9.23□□□□□ -0.93
BRPF3-201ENST00000339717 NUP210Q8TEM1 1887 aaPredicted RBP9.23□□□□□ -0.93
BRPF3-201ENST00000339717 IGKV4-1P06312 121 aa9.23□□□□□ -0.93
BRPF3-201ENST00000339717 WFDC10BQ8IUB3 73 aa9.23□□□□□ -0.93
BRPF3-201ENST00000339717 MUC7Q8TAX7 377 aa9.23□□□□□ -0.93
BRPF3-201ENST00000339717 IGHV7-81A0A0B4J1V7 117 aa9.22□□□□□ -0.93
BRPF3-201ENST00000339717 A8MUN3 132 aa9.22□□□□□ -0.93
BRPF3-201ENST00000339717 EML5Q05BV3 1969 aa9.22□□□□□ -0.93
BRPF3-201ENST00000339717 FSTL3O95633 263 aa9.22□□□□□ -0.93
BRPF3-201ENST00000339717 HTN3P15516 51 aa9.22□□□□□ -0.93
BRPF3-201ENST00000339717 SPAG11AQ6PDA7 123 aa9.22□□□□□ -0.93
BRPF3-201ENST00000339717 PLA2G2CQ5R387 149 aa9.21□□□□□ -0.93
BRPF3-201ENST00000339717 MED13LQ71F56 2210 aa9.21□□□□□ -0.94
BRPF3-201ENST00000339717 CLPSL2Q6UWE3 100 aa9.21□□□□□ -0.94
BRPF3-201ENST00000339717 K7EMT4 169 aa9.2□□□□□ -0.94
BRPF3-201ENST00000339717 IGLV1-47P01700 117 aa9.2□□□□□ -0.94
BRPF3-201ENST00000339717 TRAV10A0A0B4J240 114 aa9.2□□□□□ -0.94
BRPF3-201ENST00000339717 PLXNB1O43157 2135 aa9.2□□□□□ -0.94
BRPF3-201ENST00000339717 PRSS33Q8NF86 280 aa9.2□□□□□ -0.94
BRPF3-201ENST00000339717 CCL24O00175 119 aa9.2□□□□□ -0.94
BRPF3-201ENST00000339717 TM2D3Q9BRN9 247 aa9.2□□□□□ -0.94
BRPF3-201ENST00000339717 DEFB130BP0DP73 79 aa9.19□□□□□ -0.94
BRPF3-201ENST00000339717 DEFB130AP0DP74 79 aa9.19□□□□□ -0.94
BRPF3-201ENST00000339717 WFDC13Q8IUB5 93 aa9.19□□□□□ -0.94
BRPF3-201ENST00000339717 ATG2AQ2TAZ0 1938 aa9.19□□□□□ -0.94
BRPF3-201ENST00000339717 COX17Q14061 63 aa9.19□□□□□ -0.94
BRPF3-201ENST00000339717 SMIM1B2RUZ4 78 aa9.19□□□□□ -0.94
BRPF3-201ENST00000339717 H0Y9J4 135 aa9.19□□□□□ -0.94
BRPF3-201ENST00000339717 IGFL3Q6UXB1 125 aa9.19□□□□□ -0.94
BRPF3-201ENST00000339717 RETNLBQ9BQ08 111 aa9.19□□□□□ -0.94
BRPF3-201ENST00000339717 PCNX2A6NKB5 2137 aa9.18□□□□□ -0.94
BRPF3-201ENST00000339717 TNCP24821 2201 aa9.18□□□□□ -0.94
BRPF3-201ENST00000339717 CAMK2N2Q96S95 79 aa9.18□□□□□ -0.94
BRPF3-201ENST00000339717 TTC28Q96AY4 2481 aa9.18□□□□□ -0.94
BRPF3-201ENST00000339717 TRAV22A0A0B4J277 110 aa9.17□□□□□ -0.94
BRPF3-201ENST00000339717 ZNF843Q8N446 348 aa9.17□□□□□ -0.94
BRPF3-201ENST00000339717 ZNF580Q9UK33 172 aa9.17□□□□□ -0.94
BRPF3-201ENST00000339717 C9orf116Q5BN46 136 aaPredicted RBP9.17□□□□□ -0.94
BRPF3-201ENST00000339717 H3BUX3 64 aa9.17□□□□□ -0.94
BRPF3-201ENST00000339717 Q6ZRU5 148 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms