RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.41□□□□□ -0.42
ITGA4-202ENST00000339307 IGKV2-29A2NJV5 120 aaPredicted RBP12.41□□□□□ -0.42
ITGA4-202ENST00000339307 APCSP02743 223 aa12.41□□□□□ -0.42
ITGA4-202ENST00000339307 SLPIP03973 132 aa12.41□□□□□ -0.42
ITGA4-202ENST00000339307 HIGD2BQ4VC39 106 aa12.41□□□□□ -0.42
ITGA4-202ENST00000339307 SVBPQ8N300 66 aa12.41□□□□□ -0.42
ITGA4-202ENST00000339307 SNAPINO95295 136 aa12.39□□□□□ -0.43
ITGA4-202ENST00000339307 CHCHD10Q8WYQ3 142 aaPredicted RBP12.39□□□□□ -0.43
ITGA4-202ENST00000339307 TRAV9-1A0A075B6T8 112 aa12.38□□□□□ -0.43
ITGA4-202ENST00000339307 A0A087WYN8 130 aa12.38□□□□□ -0.43
ITGA4-202ENST00000339307 C7orf77A4D0Y5 90 aa12.38□□□□□ -0.43
ITGA4-202ENST00000339307 APOC3P02656 99 aa12.38□□□□□ -0.43
ITGA4-202ENST00000339307 PMCHP20382 165 aa12.38□□□□□ -0.43
ITGA4-202ENST00000339307 PLA2G2DQ9UNK4 145 aa12.38□□□□□ -0.43
ITGA4-202ENST00000339307 SDHAF1A6NFY7 115 aa12.37□□□□□ -0.43
ITGA4-202ENST00000339307 NCR2O95944 276 aa12.37□□□□□ -0.43
ITGA4-202ENST00000339307 FGF6P10767 208 aa12.37□□□□□ -0.43
ITGA4-202ENST00000339307 HBBP68871 147 aa12.37□□□□□ -0.43
ITGA4-202ENST00000339307 C15orf56Q8N910 161 aa12.37□□□□□ -0.43
ITGA4-202ENST00000339307 BTF3L4Q96K17 158 aa12.37□□□□□ -0.43
ITGA4-202ENST00000339307 RPS10P46783 165 aaKnown RBP12.37□□□□□ -0.43
ITGA4-202ENST00000339307 COX6A2Q02221 97 aa12.37□□□□□ -0.43
ITGA4-202ENST00000339307 CIRBPQ14011 172 aaKnown RBP12.37□□□□□ -0.43
ITGA4-202ENST00000339307 SLC7A5P1Q8MH63 180 aa12.37□□□□□ -0.43
ITGA4-202ENST00000339307 IGKV2-24A0A0C4DH68 120 aa12.36□□□□□ -0.43
ITGA4-202ENST00000339307 A0A1B0GXF2 115 aa12.36□□□□□ -0.43
ITGA4-202ENST00000339307 S100PP25815 95 aa12.36□□□□□ -0.43
ITGA4-202ENST00000339307 SPACA4Q8TDM5 124 aa12.36□□□□□ -0.43
ITGA4-202ENST00000339307 RNF185Q96GF1 192 aa12.36□□□□□ -0.43
ITGA4-202ENST00000339307 TMEM101Q96IK0 257 aa12.36□□□□□ -0.43
ITGA4-202ENST00000339307 H7C423 109 aa12.35□□□□□ -0.43
ITGA4-202ENST00000339307 I3L3M4 83 aa12.35□□□□□ -0.43
ITGA4-202ENST00000339307 MAJINQ3KP22 176 aa12.35□□□□□ -0.43
ITGA4-202ENST00000339307 RPS10P5Q9NQ39 176 aa12.35□□□□□ -0.43
ITGA4-202ENST00000339307 C7orf33Q8WU49 177 aa12.34□□□□□ -0.43
ITGA4-202ENST00000339307 MRAP2Q96G30 205 aa12.34□□□□□ -0.43
ITGA4-202ENST00000339307 FAT3Q8TDW7 4589 aa12.33□□□□□ -0.44
ITGA4-202ENST00000339307 RAB4AP20338 218 aa12.33□□□□□ -0.44
ITGA4-202ENST00000339307 XCL1P47992 114 aa12.33□□□□□ -0.44
ITGA4-202ENST00000339307 CAMPP49913 170 aa12.33□□□□□ -0.44
ITGA4-202ENST00000339307 MRPL54Q6P161 138 aaKnown RBP12.33□□□□□ -0.44
ITGA4-202ENST00000339307 ST20Q9HBF5 79 aa12.33□□□□□ -0.44
ITGA4-202ENST00000339307 PPP1R17O96001 155 aa12.32□□□□□ -0.44
ITGA4-202ENST00000339307 FAM104BQ5XKR9 115 aa12.32□□□□□ -0.44
ITGA4-202ENST00000339307 Q6ZRU5 148 aa12.32□□□□□ -0.44
ITGA4-202ENST00000339307 PRSS3P2Q8NHM4 247 aa12.32□□□□□ -0.44
ITGA4-202ENST00000339307 PHOX2AO14813 284 aa12.31□□□□□ -0.44
ITGA4-202ENST00000339307 ZNF25P17030 456 aaPredicted RBP12.31□□□□□ -0.44
ITGA4-202ENST00000339307 OR5A1Q8NGJ0 315 aa12.31□□□□□ -0.44
ITGA4-202ENST00000339307 GAS8-AS1O95177 125 aa12.3□□□□□ -0.44
ITGA4-202ENST00000339307 FOXI1Q12951 378 aa12.3□□□□□ -0.44
ITGA4-202ENST00000339307 AMN1Q8IY45 258 aa12.3□□□□□ -0.44
ITGA4-202ENST00000339307 PLAC8Q9NZF1 115 aa12.3□□□□□ -0.44
ITGA4-202ENST00000339307 CCL25O15444 150 aa12.29□□□□□ -0.44
ITGA4-202ENST00000339307 COX19Q49B96 90 aa12.29□□□□□ -0.44
ITGA4-202ENST00000339307 GVQW2A0A096LPI5 108 aaPredicted RBP12.28□□□□□ -0.44
ITGA4-202ENST00000339307 TRBV6-5A0A0K0K1A5 114 aa12.28□□□□□ -0.44
ITGA4-202ENST00000339307 PPBPP02775 128 aa12.28□□□□□ -0.44
ITGA4-202ENST00000339307 SS18Q15532 418 aa12.28□□□□□ -0.44
ITGA4-202ENST00000339307 STPG4Q8N801 248 aa12.28□□□□□ -0.44
ITGA4-202ENST00000339307 LINC00959A0A1B0GUT2 108 aa12.28□□□□□ -0.44
ITGA4-202ENST00000339307 TSHBP01222 138 aa12.28□□□□□ -0.44
ITGA4-202ENST00000339307 LINC00526Q96FQ7 95 aa12.28□□□□□ -0.44
ITGA4-202ENST00000339307 MRPL51Q4U2R6 128 aaKnown RBP12.27□□□□□ -0.45
ITGA4-202ENST00000339307 HMCN2Q8NDA2 5059 aa12.26□□□□□ -0.45
ITGA4-202ENST00000339307 PKHD1L1Q86WI1 4243 aa12.26□□□□□ -0.45
ITGA4-202ENST00000339307 IGHV1-58A0A0C4DH39 117 aa12.26□□□□□ -0.45
ITGA4-202ENST00000339307 A0A096LNI7 61 aa12.25□□□□□ -0.45
ITGA4-202ENST00000339307 ESDP10768 282 aa12.25□□□□□ -0.45
ITGA4-202ENST00000339307 FCER1GP30273 86 aa12.25□□□□□ -0.45
ITGA4-202ENST00000339307 CKS2P33552 79 aa12.25□□□□□ -0.45
ITGA4-202ENST00000339307 TRBV24-1A0A075B6N3 115 aa12.24□□□□□ -0.45
ITGA4-202ENST00000339307 SMKR1H3BMG3 65 aa12.24□□□□□ -0.45
ITGA4-202ENST00000339307 ZNF561-AS1K7EIQ3 104 aa12.24□□□□□ -0.45
ITGA4-202ENST00000339307 MT1HL1P0DM35 61 aa12.24□□□□□ -0.45
ITGA4-202ENST00000339307 GNB1LQ9BYB4 327 aa12.24□□□□□ -0.45
ITGA4-202ENST00000339307 ZNF664Q8N3J9 261 aa12.23□□□□□ -0.45
ITGA4-202ENST00000339307 CARD19Q96LW7 228 aa12.23□□□□□ -0.45
ITGA4-202ENST00000339307 C20orf78Q9BR46 151 aa12.23□□□□□ -0.45
ITGA4-202ENST00000339307 CDC42SE2Q9NRR3 84 aa12.23□□□□□ -0.45
ITGA4-202ENST00000339307 LAMTOR2Q9Y2Q5 125 aa12.23□□□□□ -0.45
ITGA4-202ENST00000339307 MT-ND6P03923 174 aa12.22□□□□□ -0.45
ITGA4-202ENST00000339307 POLR2KP53803 58 aaKnown RBP12.22□□□□□ -0.45
ITGA4-202ENST00000339307 TMEM136Q6ZRR5 245 aa12.22□□□□□ -0.45
ITGA4-202ENST00000339307 ORMDL3Q8N138 153 aa12.22□□□□□ -0.45
ITGA4-202ENST00000339307 NRACQ8N912 160 aa12.22□□□□□ -0.45
ITGA4-202ENST00000339307 LINC00474Q9P2X8 69 aa12.22□□□□□ -0.45
ITGA4-202ENST00000339307 PKIGQ9Y2B9 76 aa12.22□□□□□ -0.45
ITGA4-202ENST00000339307 VCYO14598 125 aa12.21□□□□□ -0.45
ITGA4-202ENST00000339307 MALP21145 153 aa12.21□□□□□ -0.45
ITGA4-202ENST00000339307 RPL32P62910 135 aaKnown RBP12.21□□□□□ -0.45
ITGA4-202ENST00000339307 CD164L2Q6UWJ8 174 aa12.21□□□□□ -0.45
ITGA4-202ENST00000339307 SMCO4Q9NRQ5 59 aa12.21□□□□□ -0.45
ITGA4-202ENST00000339307 TRBV27A0A0K0K1C4 114 aa12.2□□□□□ -0.46
ITGA4-202ENST00000339307 SUMO2P61956 95 aaKnown RBP12.2□□□□□ -0.46
ITGA4-202ENST00000339307 PRR3P79522 188 aaKnown RBP12.2□□□□□ -0.46
ITGA4-202ENST00000339307 D6R8Y8 96 aa12.2□□□□□ -0.46
ITGA4-202ENST00000339307 SYCNQ0VAF6 134 aa12.2□□□□□ -0.46
ITGA4-202ENST00000339307 RNASE13Q5GAN3 156 aaKnown RBP12.2□□□□□ -0.46
ITGA4-202ENST00000339307 MRPL52Q86TS9 123 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms