RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 YAE1D1Q9NRH1 226 aa10.4□□□□□ -0.75
PCDH8-201ENST00000338862 PIK3CD-AS1Q5SR53 167 aa10.39□□□□□ -0.75
PCDH8-201ENST00000338862 C10orf105Q8TEF2 133 aa10.39□□□□□ -0.75
PCDH8-201ENST00000338862 FBN2P35556 2912 aa10.39□□□□□ -0.75
PCDH8-201ENST00000338862 NBEAL2Q6ZNJ1 2754 aa10.39□□□□□ -0.75
PCDH8-201ENST00000338862 K7EQG2 157 aa10.38□□□□□ -0.75
PCDH8-201ENST00000338862 LINC01619G3V211 115 aa10.38□□□□□ -0.75
PCDH8-201ENST00000338862 FAM236AA0A1B0GUQ0 79 aa10.38□□□□□ -0.75
PCDH8-201ENST00000338862 FAM236BA0A1B0GV22 79 aa10.38□□□□□ -0.75
PCDH8-201ENST00000338862 EIF4EBP3O60516 100 aaPredicted RBP10.38□□□□□ -0.75
PCDH8-201ENST00000338862 H7C423 109 aa10.37□□□□□ -0.75
PCDH8-201ENST00000338862 CLPSL2Q6UWE3 100 aa10.37□□□□□ -0.75
PCDH8-201ENST00000338862 CELSR2Q9HCU4 2923 aa10.37□□□□□ -0.75
PCDH8-201ENST00000338862 A0A096LPF7 62 aa10.37□□□□□ -0.75
PCDH8-201ENST00000338862 A0A0B4J2C4 111 aa10.37□□□□□ -0.75
PCDH8-201ENST00000338862 PAX4O43316 350 aa10.36□□□□□ -0.75
PCDH8-201ENST00000338862 NSUN5P1Q3KNT7 163 aa10.36□□□□□ -0.75
PCDH8-201ENST00000338862 C9orf85Q96MD7 179 aa10.36□□□□□ -0.75
PCDH8-201ENST00000338862 TEX15Q9BXT5 2789 aa10.36□□□□□ -0.75
PCDH8-201ENST00000338862 VSIG2Q96IQ7 327 aa10.36□□□□□ -0.75
PCDH8-201ENST00000338862 RBMY1A1P0DJD3 496 aaKnown RBP10.35□□□□□ -0.75
PCDH8-201ENST00000338862 RBMY1CP0DJD4 496 aa10.35□□□□□ -0.75
PCDH8-201ENST00000338862 RPL36AP83881 106 aaKnown RBP10.35□□□□□ -0.75
PCDH8-201ENST00000338862 RBMY1FQ15415 496 aaKnown RBP10.35□□□□□ -0.75
PCDH8-201ENST00000338862 RPL36ALQ969Q0 106 aaKnown RBP10.35□□□□□ -0.75
PCDH8-201ENST00000338862 NF1P21359 2839 aa10.35□□□□□ -0.75
PCDH8-201ENST00000338862 BAALC-AS2P0C853 105 aa10.35□□□□□ -0.75
PCDH8-201ENST00000338862 MIAQ16674 131 aa10.35□□□□□ -0.75
PCDH8-201ENST00000338862 BSNQ9UPA5 3926 aa10.35□□□□□ -0.75
PCDH8-201ENST00000338862 TINCRA0A1B0GVN0 87 aa10.35□□□□□ -0.75
PCDH8-201ENST00000338862 TMEM101Q96IK0 257 aa10.35□□□□□ -0.75
PCDH8-201ENST00000338862 EDA2RQ9HAV5 297 aa10.35□□□□□ -0.75
PCDH8-201ENST00000338862 NOP10Q9NPE3 64 aaKnown RBP10.35□□□□□ -0.75
PCDH8-201ENST00000338862 TRGV4A0A0C4DH28 118 aa10.34□□□□□ -0.75
PCDH8-201ENST00000338862 H3BUA1 57 aa10.34□□□□□ -0.75
PCDH8-201ENST00000338862 K7EMT4 169 aa10.34□□□□□ -0.75
PCDH8-201ENST00000338862 C5orf38Q86SI9 138 aa10.34□□□□□ -0.75
PCDH8-201ENST00000338862 TRBV6-5A0A0K0K1A5 114 aa10.34□□□□□ -0.75
PCDH8-201ENST00000338862 INSP01308 110 aa10.34□□□□□ -0.75
PCDH8-201ENST00000338862 ATP5G1P05496 136 aa10.34□□□□□ -0.75
PCDH8-201ENST00000338862 DEFB130BP0DP73 79 aa10.34□□□□□ -0.75
PCDH8-201ENST00000338862 DEFB130AP0DP74 79 aa10.34□□□□□ -0.75
PCDH8-201ENST00000338862 COX6A2Q02221 97 aa10.33□□□□□ -0.76
PCDH8-201ENST00000338862 HERV-K104P63124 156 aa10.33□□□□□ -0.76
PCDH8-201ENST00000338862 AMELXQ99217 191 aa10.33□□□□□ -0.76
PCDH8-201ENST00000338862 CRPP02741 224 aa10.33□□□□□ -0.76
PCDH8-201ENST00000338862 ZFHX3Q15911 3703 aa10.33□□□□□ -0.76
PCDH8-201ENST00000338862 IGLV1-40P01703 118 aa10.32□□□□□ -0.76
PCDH8-201ENST00000338862 PRB1P04280 392 aa10.32□□□□□ -0.76
PCDH8-201ENST00000338862 PSMB8P28062 276 aa10.32□□□□□ -0.76
PCDH8-201ENST00000338862 IGKV3D-7A0A0C4DH55 119 aa10.32□□□□□ -0.76
PCDH8-201ENST00000338862 SHISA2Q6UWI4 295 aa10.32□□□□□ -0.76
PCDH8-201ENST00000338862 C9orf153Q5TBE3 101 aa10.32□□□□□ -0.76
PCDH8-201ENST00000338862 Q6ZTI0 123 aa10.32□□□□□ -0.76
PCDH8-201ENST00000338862 PEMTQ9UBM1 199 aa10.32□□□□□ -0.76
PCDH8-201ENST00000338862 LINC00694P0DN24 101 aa10.31□□□□□ -0.76
PCDH8-201ENST00000338862 CSMD2Q7Z408 3487 aa10.31□□□□□ -0.76
PCDH8-201ENST00000338862 TRBV30A0A0K0K1B3 111 aa10.31□□□□□ -0.76
PCDH8-201ENST00000338862 HIST1H4AP62805 103 aaKnown RBP10.31□□□□□ -0.76
PCDH8-201ENST00000338862 MRPL23Q16540 153 aaKnown RBP10.31□□□□□ -0.76
PCDH8-201ENST00000338862 CFAP46Q8IYW2 2715 aa10.31□□□□□ -0.76
PCDH8-201ENST00000338862 FAM19A4Q96LR4 140 aa10.3□□□□□ -0.76
PCDH8-201ENST00000338862 DAZ2Q13117 558 aaKnown RBP10.3□□□□□ -0.76
PCDH8-201ENST00000338862 DAZ4Q86SG3 579 aaKnown RBP10.3□□□□□ -0.76
PCDH8-201ENST00000338862 LINC01356Q8N9X3 169 aa10.3□□□□□ -0.76
PCDH8-201ENST00000338862 DAZ3Q9NR90 486 aaKnown RBP10.3□□□□□ -0.76
PCDH8-201ENST00000338862 UBE2D4Q9Y2X8 147 aa10.3□□□□□ -0.76
PCDH8-201ENST00000338862 SPANXA1Q9NS26 97 aa10.3□□□□□ -0.76
PCDH8-201ENST00000338862 GCN1Q92616 2671 aaKnown RBP10.29□□□□□ -0.76
PCDH8-201ENST00000338862 LINC00308Q8TCZ7 52 aa10.29□□□□□ -0.76
PCDH8-201ENST00000338862 ODF3Q96PU9 254 aa10.29□□□□□ -0.76
PCDH8-201ENST00000338862 SLPIP03973 132 aa10.29□□□□□ -0.76
PCDH8-201ENST00000338862 PLA2G2AP14555 144 aa10.28□□□□□ -0.76
PCDH8-201ENST00000338862 WFDC10AQ9H1F0 79 aa10.28□□□□□ -0.76
PCDH8-201ENST00000338862 LOC100131303A0A0U1RQF7 123 aa10.28□□□□□ -0.76
PCDH8-201ENST00000338862 MRPS36P82909 103 aaKnown RBP10.28□□□□□ -0.76
PCDH8-201ENST00000338862 Q8N2B8 174 aa10.28□□□□□ -0.76
PCDH8-201ENST00000338862 MIR7-3HGQ8N6C7 128 aa10.28□□□□□ -0.76
PCDH8-201ENST00000338862 ESM1Q9NQ30 184 aa10.28□□□□□ -0.76
PCDH8-201ENST00000338862 VPREB3Q9UKI3 123 aa10.28□□□□□ -0.76
PCDH8-201ENST00000338862 FLNBO75369 2602 aaKnown RBP10.27□□□□□ -0.76
PCDH8-201ENST00000338862 RPL32P62910 135 aaKnown RBP10.27□□□□□ -0.77
PCDH8-201ENST00000338862 HERVK_113P63121 156 aa10.27□□□□□ -0.77
PCDH8-201ENST00000338862 C6orf226Q5I0X4 101 aa10.27□□□□□ -0.77
PCDH8-201ENST00000338862 MAP6D1Q9H9H5 199 aa10.27□□□□□ -0.77
PCDH8-201ENST00000338862 H3BT86 120 aa10.26□□□□□ -0.77
PCDH8-201ENST00000338862 CHCHD7Q9BUK0 85 aa10.26□□□□□ -0.77
PCDH8-201ENST00000338862 RBMY1BA6NDE4 496 aaKnown RBP10.26□□□□□ -0.77
PCDH8-201ENST00000338862 RBMY1EA6NEQ0 496 aaKnown RBP10.26□□□□□ -0.77
PCDH8-201ENST00000338862 LST1O00453 97 aa10.26□□□□□ -0.77
PCDH8-201ENST00000338862 RBMY1DP0C7P1 496 aaKnown RBP10.26□□□□□ -0.77
PCDH8-201ENST00000338862 C14orf132Q9NPU4 83 aa10.26□□□□□ -0.77
PCDH8-201ENST00000338862 XCL1P47992 114 aa10.25□□□□□ -0.77
PCDH8-201ENST00000338862 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.25□□□□□ -0.77
PCDH8-201ENST00000338862 SND1-IT1Q9HBX3 110 aa10.25□□□□□ -0.77
PCDH8-201ENST00000338862 HTN3P15516 51 aa10.25□□□□□ -0.77
PCDH8-201ENST00000338862 SDIM1Q6ZPB5 146 aa10.24□□□□□ -0.77
PCDH8-201ENST00000338862 VPS13CQ709C8 3753 aa10.24□□□□□ -0.77
PCDH8-201ENST00000338862 FLNAP21333 2647 aaKnown RBP10.24□□□□□ -0.77
PCDH8-201ENST00000338862 TMEM243Q9BU79 118 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms