RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CFC1P0CG37 223 aa7.82□□□□□ -1.16
RTN3-201ENST00000338850 RBMY1A1P0DJD3 496 aaKnown RBP7.82□□□□□ -1.16
RTN3-201ENST00000338850 RBMY1CP0DJD4 496 aa7.82□□□□□ -1.16
RTN3-201ENST00000338850 RBMY1FQ15415 496 aaKnown RBP7.82□□□□□ -1.16
RTN3-201ENST00000338850 ETDBQ3ZM63 59 aa7.82□□□□□ -1.16
RTN3-201ENST00000338850 C10orf99Q6UWK7 81 aa7.82□□□□□ -1.16
RTN3-201ENST00000338850 FAM19A3Q7Z5A8 133 aa7.82□□□□□ -1.16
RTN3-201ENST00000338850 TEN1Q86WV5 123 aa7.82□□□□□ -1.16
RTN3-201ENST00000338850 WFDC9Q8NEX5 89 aa7.82□□□□□ -1.16
RTN3-201ENST00000338850 IGHV1-58A0A0C4DH39 117 aa7.81□□□□□ -1.16
RTN3-201ENST00000338850 RS1O15537 224 aa7.81□□□□□ -1.16
RTN3-201ENST00000338850 INSP01308 110 aa7.81□□□□□ -1.16
RTN3-201ENST00000338850 TIRAPP58753 221 aa7.81□□□□□ -1.16
RTN3-201ENST00000338850 FOXI1Q12951 378 aa7.81□□□□□ -1.16
RTN3-201ENST00000338850 C11orf72Q8NBR9 251 aa7.81□□□□□ -1.16
RTN3-201ENST00000338850 IL17DQ8TAD2 202 aa7.81□□□□□ -1.16
RTN3-201ENST00000338850 MRAPQ8TCY5 172 aa7.81□□□□□ -1.16
RTN3-201ENST00000338850 TMEM263Q8WUH6 116 aaKnown RBP7.81□□□□□ -1.16
RTN3-201ENST00000338850 PPDPFLQ8WWR9 84 aa7.81□□□□□ -1.16
RTN3-201ENST00000338850 FAM104AQ969W3 186 aa7.81□□□□□ -1.16
RTN3-201ENST00000338850 RAX2Q96IS3 184 aa7.81□□□□□ -1.16
RTN3-201ENST00000338850 RBMY1BA6NDE4 496 aaKnown RBP7.8□□□□□ -1.16
RTN3-201ENST00000338850 RBMY1EA6NEQ0 496 aaKnown RBP7.8□□□□□ -1.16
RTN3-201ENST00000338850 APOMO95445 188 aa7.8□□□□□ -1.16
RTN3-201ENST00000338850 IGHV3-33P01772 117 aa7.8□□□□□ -1.16
RTN3-201ENST00000338850 RBMY1DP0C7P1 496 aaKnown RBP7.8□□□□□ -1.16
RTN3-201ENST00000338850 SMCPP49901 116 aaPredicted RBP7.8□□□□□ -1.16
RTN3-201ENST00000338850 DEFB131AP59861 70 aa7.8□□□□□ -1.16
RTN3-201ENST00000338850 SMAGPQ0VAQ4 97 aa7.8□□□□□ -1.16
RTN3-201ENST00000338850 CHCHD7Q9BUK0 85 aa7.8□□□□□ -1.16
RTN3-201ENST00000338850 MAP6D1Q9H9H5 199 aa7.8□□□□□ -1.16
RTN3-201ENST00000338850 TSSC4Q9Y5U2 329 aaPredicted RBP7.8□□□□□ -1.16
RTN3-201ENST00000338850 TNFRSF18Q9Y5U5 241 aa7.8□□□□□ -1.16
RTN3-201ENST00000338850 DNAH3Q8TD57 4116 aa7.8□□□□□ -1.16
RTN3-201ENST00000338850 TRBV30A0A0K0K1B3 111 aa7.79□□□□□ -1.16
RTN3-201ENST00000338850 CIDEAO60543 219 aa7.79□□□□□ -1.16
RTN3-201ENST00000338850 IFITM1P13164 125 aa7.79□□□□□ -1.16
RTN3-201ENST00000338850 CMC4P56277 68 aaPredicted RBP7.79□□□□□ -1.16
RTN3-201ENST00000338850 ZFAND6Q6FIF0 208 aa7.79□□□□□ -1.16
RTN3-201ENST00000338850 DUX3Q96PT4 197 aa7.79□□□□□ -1.16
RTN3-201ENST00000338850 UBE2D4Q9Y2X8 147 aa7.79□□□□□ -1.16
RTN3-201ENST00000338850 CSDC2Q9Y534 153 aaKnown RBP7.79□□□□□ -1.16
RTN3-201ENST00000338850 A0A0J9YXV3 536 aa7.78□□□□□ -1.16
RTN3-201ENST00000338850 TRBV10-1A0A0K0K1A3 114 aa7.78□□□□□ -1.16
RTN3-201ENST00000338850 A4D1N5 150 aa7.78□□□□□ -1.16
RTN3-201ENST00000338850 TCL1BO95988 128 aa7.78□□□□□ -1.16
RTN3-201ENST00000338850 PF4P02776 101 aa7.78□□□□□ -1.16
RTN3-201ENST00000338850 IGHV3-30-3P0DP02 117 aa7.78□□□□□ -1.16
RTN3-201ENST00000338850 EMP1P54849 157 aa7.78□□□□□ -1.16
RTN3-201ENST00000338850 FHL3Q13643 280 aa7.78□□□□□ -1.16
RTN3-201ENST00000338850 DEFB114Q30KQ6 69 aa7.78□□□□□ -1.16
RTN3-201ENST00000338850 TMEM61Q8N0U2 210 aa7.78□□□□□ -1.16
RTN3-201ENST00000338850 LITAFQ99732 161 aa7.78□□□□□ -1.16
RTN3-201ENST00000338850 FAM110AQ9BQ89 295 aa7.78□□□□□ -1.16
RTN3-201ENST00000338850 LOC107984156A0A0G2JMH3 177 aa7.77□□□□□ -1.17
RTN3-201ENST00000338850 KNCNA6PVL3 124 aa7.77□□□□□ -1.17
RTN3-201ENST00000338850 IGKV3-20P01619 116 aa7.77□□□□□ -1.17
RTN3-201ENST00000338850 SLURP1P55000 103 aa7.77□□□□□ -1.17
RTN3-201ENST00000338850 KHDC1LQ5JSQ8 128 aa7.77□□□□□ -1.17
RTN3-201ENST00000338850 SH2D6Q7Z4S9 175 aa7.77□□□□□ -1.17
RTN3-201ENST00000338850 ARL17AQ8IVW1 177 aa7.77□□□□□ -1.17
RTN3-201ENST00000338850 DYNLRB2Q8TF09 96 aa7.77□□□□□ -1.17
RTN3-201ENST00000338850 VSIG2Q96IQ7 327 aa7.77□□□□□ -1.17
RTN3-201ENST00000338850 ERG28Q9UKR5 140 aa7.77□□□□□ -1.17
RTN3-201ENST00000338850 TMEM262E9PQX1 116 aa7.76□□□□□ -1.17
RTN3-201ENST00000338850 K7EIL1 84 aa7.76□□□□□ -1.17
RTN3-201ENST00000338850 PSMB2P49721 201 aa7.76□□□□□ -1.17
RTN3-201ENST00000338850 MIAQ16674 131 aa7.76□□□□□ -1.17
RTN3-201ENST00000338850 LINC00482Q8N8I6 264 aa7.76□□□□□ -1.17
RTN3-201ENST00000338850 COPS9Q8WXC6 57 aa7.76□□□□□ -1.17
RTN3-201ENST00000338850 NDUFA1O15239 70 aa7.75□□□□□ -1.17
RTN3-201ENST00000338850 AZU1P20160 251 aa7.75□□□□□ -1.17
RTN3-201ENST00000338850 KRTAP10-11P60412 298 aa7.75□□□□□ -1.17
RTN3-201ENST00000338850 ATXN8Q156A1 80 aa7.75□□□□□ -1.17
RTN3-201ENST00000338850 OPRPNQ99935 248 aaPredicted RBP7.75□□□□□ -1.17
RTN3-201ENST00000338850 IGLV5-39A0A0G2JS06 123 aa7.74□□□□□ -1.17
RTN3-201ENST00000338850 EIF4EBP3O60516 100 aaPredicted RBP7.74□□□□□ -1.17
RTN3-201ENST00000338850 RPL13AP40429 203 aaKnown RBP7.74□□□□□ -1.17
RTN3-201ENST00000338850 HERVK_113P63121 156 aa7.74□□□□□ -1.17
RTN3-201ENST00000338850 EGFEM1PQ0D2K5 195 aa7.74□□□□□ -1.17
RTN3-201ENST00000338850 MUSTN1Q8IVN3 82 aa7.74□□□□□ -1.17
RTN3-201ENST00000338850 NDUFA12Q9UI09 145 aa7.74□□□□□ -1.17
RTN3-201ENST00000338850 SELENOKQ9Y6D0 94 aa7.74□□□□□ -1.17
RTN3-201ENST00000338850 H7C423 109 aa7.73□□□□□ -1.17
RTN3-201ENST00000338850 DAZ2Q13117 558 aaKnown RBP7.73□□□□□ -1.17
RTN3-201ENST00000338850 C18orf65Q6ZTR6 163 aa7.73□□□□□ -1.17
RTN3-201ENST00000338850 DAZ4Q86SG3 579 aaKnown RBP7.73□□□□□ -1.17
RTN3-201ENST00000338850 MTURNQ8N3F0 131 aa7.73□□□□□ -1.17
RTN3-201ENST00000338850 LINC01587Q99440 93 aa7.73□□□□□ -1.17
RTN3-201ENST00000338850 CDIP1Q9H305 208 aa7.73□□□□□ -1.17
RTN3-201ENST00000338850 DAZ3Q9NR90 486 aaKnown RBP7.73□□□□□ -1.17
RTN3-201ENST00000338850 TRAV4A0A0B4J268 109 aa7.72□□□□□ -1.17
RTN3-201ENST00000338850 H3BT86 120 aa7.72□□□□□ -1.17
RTN3-201ENST00000338850 SLC25A20O43772 301 aa7.72□□□□□ -1.17
RTN3-201ENST00000338850 ODF3L2Q3SX64 289 aa7.72□□□□□ -1.17
RTN3-201ENST00000338850 Q6ZUT4 128 aa7.72□□□□□ -1.17
RTN3-201ENST00000338850 GEMIN7Q9H840 131 aaKnown RBP7.72□□□□□ -1.17
RTN3-201ENST00000338850 NBEAL2Q6ZNJ1 2754 aa7.72□□□□□ -1.17
RTN3-201ENST00000338850 COL7A1Q02388 2944 aa7.71□□□□□ -1.18
RTN3-201ENST00000338850 TRBV10-2A0A0K0K1G8 114 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms